Csep003776.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coccinella septempunctata
Gene Symbol
nfxl1
Assembly
GCA_907165205.1
Location
OU015573.1:54315320-54320036[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 4.3e+04 -8.5 6.6 6 11 109 114 109 114 0.64
2 20 2 4.3e+04 -7.8 5.6 15 19 152 156 151 156 0.81
3 20 0.13 2.8e+03 -0.3 0.4 4 10 187 193 186 193 0.95
4 20 3e-08 0.00064 20.9 17.0 1 19 201 218 201 218 0.99
5 20 2.8e-08 0.0006 21.0 14.2 1 19 254 272 254 272 0.97
6 20 1.7 3.7e+04 -3.9 1.5 5 10 274 279 274 279 0.92
7 20 3.4e-09 7.4e-05 23.9 8.7 1 18 307 324 307 325 0.97
8 20 1.3 2.7e+04 -3.5 1.0 5 10 349 354 349 354 0.86
9 20 2.7e-07 0.0058 17.8 10.7 1 18 360 377 360 378 0.97
10 20 0.067 1.5e+03 0.6 0.1 1 5 387 391 387 394 0.97
11 20 0.00037 7.9 7.8 18.0 1 18 412 429 412 430 0.94
12 20 2.6e-10 5.6e-06 27.5 11.4 1 18 439 456 439 457 0.97
13 20 0.00045 9.6 7.6 7.7 9 19 505 515 503 515 0.90
14 20 0.058 1.3e+03 0.8 4.6 4 12 527 535 525 535 0.88
15 20 2 4.3e+04 -6.9 4.5 14 18 563 567 563 567 0.86
16 20 2 4.3e+04 -4.7 3.7 9 18 585 598 585 599 0.70
17 20 3.4e-05 0.73 11.1 5.6 1 11 604 614 604 615 0.96
18 20 3.7e-07 0.0079 17.4 18.6 3 18 646 661 645 662 0.94
19 20 1.3e-05 0.28 12.5 15.7 1 19 705 725 705 725 0.95
20 20 0.94 2e+04 -3.1 0.9 6 10 755 759 754 759 0.89

Sequence Information

Coding Sequence
ATGAATAATCGTAAAAAACAAGGTAATGCGAATGCATGGAAAAAACTTCCGCAGAAAGCACCGTCTGTAAATAAGTTCGAAGAAGCTCAGAAAAAGCTTCAAGCTGCTGTCCAAAAACATATTGAGGATTATGAATCCTCTTCTGATGAGGAACTAGTTGAAAGTAAAACAGTTATAGATAAAATCACTGCTTCTTACACTACCAAAGGTGGCACCAATGATAAATTGCAAAGGACAGTATCTTATTTGAAGGACAACCTCACATCAGGGGCTACAACATGCCTTATTTGTATTTCTAAAGTTAAAAGGGATGACCAGATATGGTGTTGTGAGTCCTGCCATTGCTTTTTTCATTTGATGTGTATCCAAAGGTGGTCGAAAGATAGCATCTCCCAAAAAAAGCAGTCTCTCACATCTGATATCTCCTCTGCAGAACAACTTATTCAATGGTGTTGTCCCAAATGTAGGAGAAATTATAAGTCTGAGAGCATTCCAACAGAGTATAGGTGTTTTTGTAAAAAGAGATTAAATCCCACATACCAGGCTCTCTTAGTTCCTCATTCATGTGGTGAAATTTGTGGGAAGGAGTTAGATCCACCTTGTGGACATAAATGCTTACTTCTTTGTCATCCAGGTCCATGCCCTCCTTGTCCAGTGACAGTTAATGCCAAATGCTATTGTGGTGCAAAGCCTCCCAGACTCCAGAGATGCAGTGATAAATATTGGTCATGTGGGGAATCTTGTGGAAATTTACTTGCATGTGGTAAACATTACTGTGATGATCCGTGTCATGGAGGGGATTGTAAACCATGCACAAAGAAATGTATTCAAAAGTGCAATTGCGGGTCTCAAGCTAAACTTAGGGACTGCTCATCGCCTGAATGGAATTGTGGAAAGGTGTGTGGAAAACCATTCAGTTGTGGTTACCATGAATGCATGAAAGTATGTCATTCAGGAGATTGCAATGTCTGTGAATGGAGCTTGCCAAGGACCTGTCCTTGTGGAAAAACCAAGTATAATTTACCATGCTCTGAAGATACTCCAACATGTCCAGATACATGTGATAAACTACTAGGATGTGGTGAACATTACTGTGTTCTGAAATGTCACAAGGGAAAATGTGGAACGTGTTTGGAAATTGTCAAGAAAAAATGTAGGTGTGGACAACATACCAAAGATGTTCATTGTAGCAAACCTTTCTATTGCGAAACGAAATGTAAAAATATGAGGGACTGTAACAAGCATCCTTGCAATAAGAAGTGCTGCAATGGAGAATGTCCACCTTGCGAAAAACCATGTGGAAAAACATTGAATTGTGGCAACCATAAATGTGCATCGGTTTGTCATCGTGGTCCATGCTTTCCGTGCAATCTGGTGGATGTTGTGACGTGTAATTGTGGTGAAACCAAAGTGAGTGTGCCCTGTGGAAGGAAGAATCATGTTAAACCACCAAAATGCTCCCTGTTGTGCAAAGCACCTACCGAATGCCATCATGAGAAACGAGAACCACACAAATGTCATTTTGGAAACTGCCCACCATGTAAACAGATTTGTAACAACACCAGACCAAGTTGCCCCCATCTATGTCCAGCGCCCTGCCATGATGCTGTGATGGTTAAAGTTGAAAGGGCCAAGGCGACTGCACCTTGGGAAGAAGTTAAACCCCAAAAAGAAAAAAAACTTTTACCATGTCCCGATTGCATTGTTCCTGTTCCTGTTGAGTGCTTTGGCAAGCATGAGATAGCTGATTGGCCTTGTCATTTAGCAAAACCAGGAAGTTGTTTCCGTCCTTGTGGTAGACAATTACCATGTGGAAACCATAAGTGTACCTTAGCCTGCCACGTTGTTCAAAGTGTTAGTGATAACGATACTATGGCAGGAAGCAATTGTGAGATATGTGAAAATGAATGTACTAAAAAGAGACCTGAAGGATGCCAACACACTTGTCCTAAACCATGCCACCCTGGAGACTGTCCTCCCTGTAACCAAATGGTTAGATTGAAATGTCATTGTAGTCTAGTTCAACTGTATGTAGTATGCAAAGATGTGCTGAACCCGGATAAACATGAAGAAATTCAGAGTTGTGGGAATCAATGTCCTAAAAATTTGAAATGTGGGCATCGATGCAAAATCAACTGTCACCCTGGTCCATGTCCCGAGGGAAACCCTTGCAAAAAGAAAGTGAAAGTATTTTGCGAATGCAAAAGGTTGAAAAAGGAGATTAATTGTGACACTGTGAGAAATGGGAAGGCGAAAATAGAGTGCGACGAAGTTTGTGCAGAATTGAAAGAGGAAACCGATAGAAAAAACCAGATCCTGATTGAAGAGATTAGGAAGCAAGAGGAACTGAAGAACAAAGAAGAGATGGAGAGGTATGTGAAGAAATTTGGTGGGAAAAGGAAGAATAGAGAGAGGAGGAGTCAGTCCATTGATGATGAAGTTGGTTTCATCAAGAAATATTCAGCTCCTTTATCTGCATTAGCTGTAATAATTATTGCATTGGTGACATACACTGTAATCATTGGTAAATGA
Protein Sequence
MNNRKKQGNANAWKKLPQKAPSVNKFEEAQKKLQAAVQKHIEDYESSSDEELVESKTVIDKITASYTTKGGTNDKLQRTVSYLKDNLTSGATTCLICISKVKRDDQIWCCESCHCFFHLMCIQRWSKDSISQKKQSLTSDISSAEQLIQWCCPKCRRNYKSESIPTEYRCFCKKRLNPTYQALLVPHSCGEICGKELDPPCGHKCLLLCHPGPCPPCPVTVNAKCYCGAKPPRLQRCSDKYWSCGESCGNLLACGKHYCDDPCHGGDCKPCTKKCIQKCNCGSQAKLRDCSSPEWNCGKVCGKPFSCGYHECMKVCHSGDCNVCEWSLPRTCPCGKTKYNLPCSEDTPTCPDTCDKLLGCGEHYCVLKCHKGKCGTCLEIVKKKCRCGQHTKDVHCSKPFYCETKCKNMRDCNKHPCNKKCCNGECPPCEKPCGKTLNCGNHKCASVCHRGPCFPCNLVDVVTCNCGETKVSVPCGRKNHVKPPKCSLLCKAPTECHHEKREPHKCHFGNCPPCKQICNNTRPSCPHLCPAPCHDAVMVKVERAKATAPWEEVKPQKEKKLLPCPDCIVPVPVECFGKHEIADWPCHLAKPGSCFRPCGRQLPCGNHKCTLACHVVQSVSDNDTMAGSNCEICENECTKKRPEGCQHTCPKPCHPGDCPPCNQMVRLKCHCSLVQLYVVCKDVLNPDKHEEIQSCGNQCPKNLKCGHRCKINCHPGPCPEGNPCKKKVKVFCECKRLKKEINCDTVRNGKAKIECDEVCAELKEETDRKNQILIEEIRKQEELKNKEEMERYVKKFGGKRKNRERRSQSIDDEVGFIKKYSAPLSALAVIIIALVTYTVIIGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00765225;
90% Identity
-
80% Identity
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