Csep032400.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- stc
- Assembly
- GCA_907165205.1
- Location
- OU015576.1:9489190-9494448[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 4.3e+04 -4.8 3.4 6 10 357 361 354 361 0.69 2 14 0.14 2.9e+03 -0.4 0.3 4 10 387 393 386 393 0.94 3 14 6.1e-06 0.13 13.5 12.8 4 19 402 417 400 417 0.93 4 14 9.9e-10 2.1e-05 25.6 11.6 1 18 453 470 453 471 0.99 5 14 2e-10 4.3e-06 27.9 13.6 1 19 511 529 511 529 0.98 6 14 5.1e-08 0.0011 20.2 16.1 1 18 569 590 569 591 0.87 7 14 2 4.3e+04 -4.1 0.6 9 12 608 611 608 611 0.77 8 14 0.45 9.6e+03 -2.0 0.8 5 10 618 623 617 623 0.91 9 14 0.0027 58 5.1 8.6 1 11 629 639 629 641 0.96 10 14 1.3 2.9e+04 -3.5 1.1 4 10 644 650 643 650 0.73 11 14 6.5e-10 1.4e-05 26.2 12.1 1 18 656 673 656 674 0.98 12 14 0.00046 9.9 7.5 13.8 1 19 713 730 713 730 0.89 13 14 8.1e-08 0.0017 19.5 14.0 1 19 766 785 766 785 0.97 14 14 0.0076 1.6e+02 3.6 14.1 1 18 795 813 795 814 0.90
Sequence Information
- Coding Sequence
- ATGTCGCACTCAAATTTTCCGCAGACCAATGGTTTTGTTAGTAAGAATCCAAATTCTGATTTTAATAGAGAGTCTTATGATAGCACTTCGATACAAGAAACAGCTGGTTTCAGTGAAAGTGCTAGCAGTCAACCATCTGGAACAGGAGCTATAAAGAAGGTTAATAATGGGCTTACTTGTAATAGAGAAAAACCTCTTAAAAATGGATATGCAAAAAACAAATCTAATAAACGGGTACCATTCAATATTCCTCATAAAAAGAGTCAAAGATCTAGTTTTTGTGATGATGAACAGATGCCCTATAATGATTTCAAATCTTGGGGACATAGAAATCAAAGAGACAATAATCACTATAAAATGCCCTTTTATGACGAACATTATGAGGGTACATATAACAATAAAGGTTATAGGCAGAATTTAAGTAGGCAAAAGAATCCCCAATATGTTAGAGAGATTCACTCAAATGATTCTATGTTTGAAAGAAATGGAAAATTTAGGAATGGTAATGTAACAAATTCAGACCATCACAATTCAGATACATCTAGCAGAAAACCAGAAAATATAAGCTCTTATGAAGAGTGTTCTAATGTGTTTAAATCAAATAGATATTGGAATTATAAAGGTAGCAGAAGAAATTTCAGACATTATAATGAGGAAACTACATATGAAGATTCAAATGCACCAATTTCTAACAAAAATGGGCAATATCAAAATGGTAGGGATAAGAATACCCTGTTGCTTGATGAACCTTTGCAAAGAAACTTTGATAGAGACAGATTTACTGGAAATAGAAATCATAAGCATAATGGTAGAATGGCATATTTTAATCAGAAAAAACATAGAAATAATGGGAAAGGATTGAAAAATAATGTGGAAATTGCTTCTCAAAGGGAGAGACTTGAAGGAATGATTAAACAACGAATTTTAGAATGTCTAGTCTGCTGTGAATTATTAAAGCACAATAATGAAGTTTGGTCTTGTAAACAATGTTATCACATACTTCACCTCAAATGTACTCAAGCTTGGGCAAAATCCTCTAAAATTGAAAATGGTTGGAGATGTCCTGCTTGTCAAAATGTTTGTAAGGATATACCAGCAGAATATCTGTGTTTTTGTGGAAAACAGAAAAATCCCAGAAATGTCCCAGGTTTTATAGCTCACAGCTGTGGAGAAATTTGCCTAAAGGATCGGCGCAACTGTGACCATCGTTGCTCAATATTATGCCATCCTGGCCCTTGTCCCGATTGCACTATTCTAGTGGACAAATCGTGTGGCTGTGGTAAAACGAAGCAGCAGGTTATGTGCAGTTCAGAAGTTGAAATCACCTGTGCCAGTCAATGTGATAAATTACTAAAATGTGGTATTCACAAATGTGAAGAAAAATGCCATATTGGAGATTGCAAACCATGCATAGAAATTTTACACCAGATATGTTATTGTAAAAAAAAAAGTAGGGACGTTACTTGCAGCTTCGAAACTAAAGGAAACGAAGAATATTCTTGTGGAGGCTCTTGCGAGAAGGATTTGAGATGTGGGAATCACAAATGTCAGAGAATATGTCACAGTGGTTCTTGTAATCCATGCAGTAAAGATTGCGATATAATTAAAACTTGCTTCTGTGGTAAAATGGCCCTTGAGGTCCCTAGAAAAAGTTGTTTGGATCCCATTCCTTCATGTGGCATGTTGTGTCAAAAACTTTTGAAATGTGGCCCAAGTAACGAACACCATAAATGTGAATCGCCTTGTCACGATGGGGATTGTCCACCTTGCAATCTCAGCACTTTTGTAAGATGCAGATGTGGATCTATGAACAAAGAAATACCTTGTCATAAGTTGATTGATGATGATGGAAGGTGTGAAAGAAAATGCACAAAGAAACGCTTATGCGGCAAGCACAAGTGCAACCAGCGTTGTTGTATCGAGATTGAGCATGTTTGTCCACTACCTTGTAATCGAACTCTTTCTTGCGGAAATCATAGGTGTGAATTGACTTGCCACAGTGGCAGATGTAAGCCATGCATGGAAACCAGCTTTGATGAGCTCTTTTGTGAATGTGGCGCCAACGTCACGTATCCACCTATACCGTGTGGGACAAAGCCACCAGTTTGTGACAAACCATGTTCAAGACCAAGAGACTGCGGGCATGAAGTTAACCATGCATGCCATACAGGTCCCTGTCCACCTTGCACCGTTTTATGTAAAAGATGGTGTTATGGTAATCATGAACAAAGAGGTGCCATACCTTGCCATCAAGAGGAATTCAGTTGTGGTTTGCCATGTGGAAAACCCATACACTGTGGTAGACATAAGTGTATCAGTCCTTGTCATTTAGGAACCTGTCCTACGCCATGTAAACAGCCATGTGTTTTTGAGCGTTCATCATGTGGACATCCTTGTCTTGCAACTTGCCATGAGCCCCCTTGTCCACAAAGTAACTGCAAAAGTAAGGTTGCAGTTTCTTGTATTTGTGGAGTTCAGAAGGGAGTTAGATCATGTAATGACGTGATCAATGAGATCAGAAATATAGAATTAGCCCAATTGAGTGAAAAAATGTTAAATATGTCCAAAAATCAATCTGTAGATATGACTGACTTGAAAAAGCCCAAAAGACCAGACGTTCTCAAAATCTTAGAATGTACCGAAGAATGTCGTGTTATTGAGAGGAACCGCAGACTGGCCATAGGCCTACAAATCCGCAATCCAGATATAAGCCAGAAACTCACTCCTCGATATTCAGACTTCATGAAAGGTTGGGCCAAAAAGGATCCTCACTTTTGCCAACGAGTGCACGATAGATTAACCGAGTTGGTGCAATTGGCCAAGCAGAGCCAACAGAAGAGTAGAGCACACTCTTTTGAATCAATGAACAGAGATAAACGCCAATTTGTTCATGAATATTGTGAGCATTTTGGTTGTGAAAGTGAAGCTTATGATGCTGAACCAAACAGGAATGTTGTGGCTACAGCGATAAGGGATAAATCTTGGTTACCCAGTATGAGTGTTTTGGAAGTAATTCAAAGGGAGAACGGCCAAAGGAAAGTGCCTATGCCTACTAATTTGGAAAGGAATTTGTGTTCTCAATCTGAAAGTGTTACTTTAAAACCTTTAAGCAGAACTTATAGGTCAAGTGTACAGACGAATGATGTTGAATATTCAAAGAAGTAG
- Protein Sequence
- MSHSNFPQTNGFVSKNPNSDFNRESYDSTSIQETAGFSESASSQPSGTGAIKKVNNGLTCNREKPLKNGYAKNKSNKRVPFNIPHKKSQRSSFCDDEQMPYNDFKSWGHRNQRDNNHYKMPFYDEHYEGTYNNKGYRQNLSRQKNPQYVREIHSNDSMFERNGKFRNGNVTNSDHHNSDTSSRKPENISSYEECSNVFKSNRYWNYKGSRRNFRHYNEETTYEDSNAPISNKNGQYQNGRDKNTLLLDEPLQRNFDRDRFTGNRNHKHNGRMAYFNQKKHRNNGKGLKNNVEIASQRERLEGMIKQRILECLVCCELLKHNNEVWSCKQCYHILHLKCTQAWAKSSKIENGWRCPACQNVCKDIPAEYLCFCGKQKNPRNVPGFIAHSCGEICLKDRRNCDHRCSILCHPGPCPDCTILVDKSCGCGKTKQQVMCSSEVEITCASQCDKLLKCGIHKCEEKCHIGDCKPCIEILHQICYCKKKSRDVTCSFETKGNEEYSCGGSCEKDLRCGNHKCQRICHSGSCNPCSKDCDIIKTCFCGKMALEVPRKSCLDPIPSCGMLCQKLLKCGPSNEHHKCESPCHDGDCPPCNLSTFVRCRCGSMNKEIPCHKLIDDDGRCERKCTKKRLCGKHKCNQRCCIEIEHVCPLPCNRTLSCGNHRCELTCHSGRCKPCMETSFDELFCECGANVTYPPIPCGTKPPVCDKPCSRPRDCGHEVNHACHTGPCPPCTVLCKRWCYGNHEQRGAIPCHQEEFSCGLPCGKPIHCGRHKCISPCHLGTCPTPCKQPCVFERSSCGHPCLATCHEPPCPQSNCKSKVAVSCICGVQKGVRSCNDVINEIRNIELAQLSEKMLNMSKNQSVDMTDLKKPKRPDVLKILECTEECRVIERNRRLAIGLQIRNPDISQKLTPRYSDFMKGWAKKDPHFCQRVHDRLTELVQLAKQSQQKSRAHSFESMNRDKRQFVHEYCEHFGCESEAYDAEPNRNVVATAIRDKSWLPSMSVLEVIQRENGQRKVPMPTNLERNLCSQSESVTLKPLSRTYRSSVQTNDVEYSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -