Csep030628.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- pnr
- Assembly
- GCA_907165205.1
- Location
- OU015576.1:17327505-17344370[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 1.9e-14 54.2 3.2 1 34 127 159 127 161 0.97 2 2 2.2e-19 1.4e-15 57.8 5.8 1 35 184 217 184 218 0.98
Sequence Information
- Coding Sequence
- ATGTTCCATTCCGGCGCTGGTAGCAATGGCTACAGTGACGGCAACGCGGGCTTCCACCAACATCTCCAACAATCCCCTGTTTACGTCCCAAGCAGCAGGGCCGTACCGCATCAATATTCCCCCGCTGCAGGGACGCACTTCGGCGCTGCAGCCCATCAGGGTGGCTGGGCGCATGCGGGAGGTTCCTACGGCGATATGGCGACGCAAGCGGCGGCGCATGGCTTGGGGGGCGCATCACATGCCAGCCCCTTGTCCGCCGGTCAGTTTTACGCCCAGAACATGATGATGTCGTCTTGGAGGGCCTACGATGGAGCTGGATTTCAAAGGACATCCCCTTATGAGGGTACCATGGAGTTCCAGTTCGGCGAAGGAAGGGAATGCGTCAATTGCGGTGCCATTTCCACCCCCCTGTGGAGGCGGGATGGTACTGGACACTATTTGTGTAACGCTTGTGGTCTGTACCACAAGATGAATGGGATGAACAGACCTCTGATCAAACCCTCCAAAAGACTGGTGAGTAGAACCGCCACCAGACGCTTAGGTCTCTGCTGCACGAATTGCGGCACCAGGACGACGACGCTCTGGCGTCGCAACAACGACGGCGAACCTGTTTGCAACGCCTGCGGTCTCTACTTCAAGCTGCACGGCGTCAACAGGCCTCTGGCGATGCGCAAGGACGGGATACAGACCCGCAAACGAAAGCCCAAAAAACAGGGGTCCGGAGGCGGTGAACGAGATGACAGTAGCTCCACCTCCGTAGAAGATGGAAAAACATCCCTAAGTATATCATCAACCCAACAACAACAACACTCCAACCAACAAGTGCCATCATCTACTCAGAACCACACCAGTCATCAACATTCACCTGAAAACAAAATTCCCCAAACCCTAGAGAGACCTTACATAAGTCCTGGTTCTCTGTTGCCATCCTCGTCGAGCGTGGTGAAGAGCGAACCAGGATACGACTACAGCTGCCTGCAGAACCAAGGGTACCCTTACCAACAGTTATTCGGTTTTCCTGGCGCCACAGCCGCGAACCCAGAGCTGGCTTACCATCACCAACATCACGTGACAGCGTCCGCTAAACTGATGGCTACAACATAG
- Protein Sequence
- MFHSGAGSNGYSDGNAGFHQHLQQSPVYVPSSRAVPHQYSPAAGTHFGAAAHQGGWAHAGGSYGDMATQAAAHGLGGASHASPLSAGQFYAQNMMMSSWRAYDGAGFQRTSPYEGTMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSRTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQGSGGGERDDSSSTSVEDGKTSLSISSTQQQQHSNQQVPSSTQNHTSHQHSPENKIPQTLERPYISPGSLLPSSSSVVKSEPGYDYSCLQNQGYPYQQLFGFPGATAANPELAYHHQHHVTASAKLMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00130972;
- 90% Identity
- iTF_00999242; iTF_00021013; iTF_00130972;
- 80% Identity
- -