Basic Information

Insect: Coccinella septempunctata
Gene Symbol: -
Assembly: GCA_907165205.1
Location: OU015573.1:52295860-52302799[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2 3.3e+02 3.3 1.3 2 23 245 267 245 267 0.96

2 11 0.0025 0.42 12.4 0.3 1 23 306 328 306 328 0.95

3 11 8.8 1.5e+03 1.2 0.3 2 19 372 391 371 392 0.84

4 11 0.19 33 6.4 1.4 1 13 402 414 402 427 0.83

5 11 0.97 1.6e+02 4.2 0.1 1 8 432 439 432 455 0.70

6 11 3.8e-06 0.00064 21.2 0.3 1 23 461 483 461 483 0.94

7 11 6.8e-06 0.0011 20.4 0.7 2 23 496 518 495 518 0.96

8 11 3.8e-05 0.0063 18.1 0.7 1 23 524 546 524 546 0.98

9 11 0.42 70 5.4 9.1 1 23 552 574 552 574 0.97

10 11 0.0065 1.1 11.1 0.3 1 23 580 603 580 603 0.95

11 11 8.8 1.5e+03 1.2 5.4 1 21 610 630 610 632 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2	3.3e+02	3.3	1.3	2	23	245	267	245	267	0.96
2	11	0.0025	0.42	12.4	0.3	1	23	306	328	306	328	0.95
3	11	8.8	1.5e+03	1.2	0.3	2	19	372	391	371	392	0.84
4	11	0.19	33	6.4	1.4	1	13	402	414	402	427	0.83
5	11	0.97	1.6e+02	4.2	0.1	1	8	432	439	432	455	0.70
6	11	3.8e-06	0.00064	21.2	0.3	1	23	461	483	461	483	0.94
7	11	6.8e-06	0.0011	20.4	0.7	2	23	496	518	495	518	0.96
8	11	3.8e-05	0.0063	18.1	0.7	1	23	524	546	524	546	0.98
9	11	0.42	70	5.4	9.1	1	23	552	574	552	574	0.97
10	11	0.0065	1.1	11.1	0.3	1	23	580	603	580	603	0.95
11	11	8.8	1.5e+03	1.2	5.4	1	21	610	630	610	632	0.92

Sequence Information

Coding Sequence: ATGGATTTGGAGGATGAGGCGATGCCGTATTTAAAGCTTCTCAATGAAAATTCTGGCAATTACCTTATACAAAATAGTTATGAGTTACAGGATTGTTTGTCAGTAGAACCAATTTTCACAGAAATGGAGACAGGAACTTGGTCCCCAGAATGTTTTCCTATACTTTTAAATGGGTCTGCAGTAGATAATAACATAAGAGGAGTTACTGATAATATAGCAGAAAAAGCAGAAGGCCATGTAGATGACAATAATTCGAACCGTCATATAATTTCTCAACTCAGAAAATCAGAAGAAACATTTGATATAACTCACCAAAAAGAGAACATTCCTAGTTCCTCAGGTTTATCGCAGAATGTTATATTATCCCAGGATTCTATGCTTAGAAGTAACACAAAGAATCAAAATCTCTCAAGTGGAAGTCAGCAAGGAAAGCAGAAGAGAGCATTTGTACTCTGCGCTAATGGAAATACTTACGAAATTAGTTATTCTAATGATAAAATGATTGATTCAATTGAGTTACAAGATATCAACGTAAATTCAGAGACATTAGACAATATAAATGAAGATACAGTTAATGGAAATGAACAGATAATTCAAATTGTGACTCCAGAAGAGCATACCCCAGATGTGGAAGATCAAGGGGATAATAGTTTGATCTCAGATAACCAAAAAGATCCAGACCCCTATGATCTTTCTGATTGGAATGAATTTCATTGTGTTGTAACTGCCAGGAAATGTAAAGTTTGTTCTTTTCTTTGTGAAAGTTTAGTGGAAATGAATGATCACTTGAACAGAGCTCATAGGGATTTAGTAGAAATGAAACAAGCATCTGAGGAAACGGAAAGTGGAAAATCAAAACTCAAAATGAGATCCTTATTGGATACAAACACATCTAAAGAAAAAAATGTAACCATTTTTTTATGCAGTACATGTAACAATATCTTTGAAACTAAGGAATTACTCATGGAACATGTTAAGATTCATAATAATGAAGAGCCCAGTATCTCAGATGAGAACCAAAGAACAAATGAACTAAAAGATAAACCTGTAAATTCTATGAGAAATCTGGCAACTTCACTACTAAAGAAACAGCAAAAAGCTATGAAGAAACTCAAGTGTTCCATAAAAGGATGTACCTTGAAATTTTCCAATGATGAAACAAAACTTCGTCATGAAGGATGTCATGTGCCGAATATGAAGCACTTCCAATGTCCTGAATGTAAAGAGGAATTTTCTGTGTGGCGAGTATGTAGCAAACATTTATGGACAAGCCATATGATAGATGCTGGTTTATATACTTGCTCCATATGTGACAAATATAAATCCATTAGTACAGTTGCAGTGATAAATCACATGGATATTCATAATACTGAGAAGCCTTTTTTGTGCCCAGATTGTGGTAAAGGTTTCAAACAACTCAATCAGCTGAGAAATCACAGGGTAATCCACAACAGAGCACAAGAGTTATCCTCTTTGTCAAGTACGAGGTGTACAATATGTGAACGCACCTTTGCAAACAGAAAATCTTTGAAAATACACATACAGAGTGTTCATGAAAAATTCAAACCGTATGTTTGTGATGTATGTGGACATAAAACATCTAGGAAAGCAATGTTGGAGCTACATCTTCGTCTTCATACTGGAGATAAGCCTCACCATTGTCCTCATTGCTCCTATAGAACAGGCGATAGTAACTGCCTGAGGAAGCATGTTATGAAACACTATGGTTACAAGAAGTATTCCTGCCCATATTGTGAGTACCAAGCTATCCAGAGCTCTGCTTATAAAAGTCATTTAATTAATAAGCATCCAGAAGCAGATGAAATTTTTAAATGTAGTTACTGTACATTTACTACTGTGAAATTCGAATCGTATCTAACCCATGTGAAATGCCACGAGTATGATGAAGAAAAAAATAGAAATGATGATCCATCTGAGAACACTCCCTCTCCTACAGTTGAGACTGAAGAAAATGAAACACAGGTCGATTTATGA
Protein Sequence: MDLEDEAMPYLKLLNENSGNYLIQNSYELQDCLSVEPIFTEMETGTWSPECFPILLNGSAVDNNIRGVTDNIAEKAEGHVDDNNSNRHIISQLRKSEETFDITHQKENIPSSSGLSQNVILSQDSMLRSNTKNQNLSSGSQQGKQKRAFVLCANGNTYEISYSNDKMIDSIELQDINVNSETLDNINEDTVNGNEQIIQIVTPEEHTPDVEDQGDNSLISDNQKDPDPYDLSDWNEFHCVVTARKCKVCSFLCESLVEMNDHLNRAHRDLVEMKQASEETESGKSKLKMRSLLDTNTSKEKNVTIFLCSTCNNIFETKELLMEHVKIHNNEEPSISDENQRTNELKDKPVNSMRNLATSLLKKQQKAMKKLKCSIKGCTLKFSNDETKLRHEGCHVPNMKHFQCPECKEEFSVWRVCSKHLWTSHMIDAGLYTCSICDKYKSISTVAVINHMDIHNTEKPFLCPDCGKGFKQLNQLRNHRVIHNRAQELSSLSSTRCTICERTFANRKSLKIHIQSVHEKFKPYVCDVCGHKTSRKAMLELHLRLHTGDKPHHCPHCSYRTGDSNCLRKHVMKHYGYKKYSCPYCEYQAIQSSAYKSHLINKHPEADEIFKCSYCTFTTVKFESYLTHVKCHEYDEEKNRNDDPSENTPSPTVETEENETQVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -