Basic Information

Insect: Coccinella septempunctata
Gene Symbol: Pol
Assembly: GCA_907165205.1
Location: OU015581.1:14363903-14371959[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0015 0.25 13.1 0.5 1 23 887 910 887 910 0.95

2 16 0.0035 0.59 11.9 0.8 1 23 913 936 913 936 0.97

3 16 1 1.7e+02 4.2 3.3 1 23 969 992 969 992 0.96

4 16 0.035 6 8.7 0.1 1 23 996 1019 996 1019 0.95

5 16 0.00046 0.077 14.7 1.2 1 23 1054 1077 1054 1077 0.96

6 16 0.097 16 7.4 0.8 1 21 1101 1121 1101 1124 0.89

7 16 0.0024 0.41 12.4 0.8 2 23 1131 1153 1131 1153 0.95

8 16 0.0014 0.24 13.2 0.1 1 23 1159 1182 1159 1182 0.97

9 16 0.0041 0.69 11.7 4.1 1 23 1188 1211 1188 1211 0.97

10 16 0.0004 0.068 14.9 3.3 1 23 1217 1240 1217 1240 0.98

11 16 0.00026 0.044 15.5 0.3 1 23 1246 1269 1246 1269 0.94

12 16 0.0094 1.6 10.5 1.7 1 23 1275 1298 1275 1298 0.96

13 16 0.01 1.7 10.4 0.9 1 23 1304 1327 1304 1327 0.96

14 16 0.56 95 5.0 3.6 2 23 1335 1357 1334 1357 0.95

15 16 5.2e-05 0.0088 17.6 1.0 1 23 1363 1386 1363 1386 0.97

16 16 1.8 3e+02 3.4 2.6 1 23 1386 1409 1386 1409 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0015	0.25	13.1	0.5	1	23	887	910	887	910	0.95
2	16	0.0035	0.59	11.9	0.8	1	23	913	936	913	936	0.97
3	16	1	1.7e+02	4.2	3.3	1	23	969	992	969	992	0.96
4	16	0.035	6	8.7	0.1	1	23	996	1019	996	1019	0.95
5	16	0.00046	0.077	14.7	1.2	1	23	1054	1077	1054	1077	0.96
6	16	0.097	16	7.4	0.8	1	21	1101	1121	1101	1124	0.89
7	16	0.0024	0.41	12.4	0.8	2	23	1131	1153	1131	1153	0.95
8	16	0.0014	0.24	13.2	0.1	1	23	1159	1182	1159	1182	0.97
9	16	0.0041	0.69	11.7	4.1	1	23	1188	1211	1188	1211	0.97
10	16	0.0004	0.068	14.9	3.3	1	23	1217	1240	1217	1240	0.98
11	16	0.00026	0.044	15.5	0.3	1	23	1246	1269	1246	1269	0.94
12	16	0.0094	1.6	10.5	1.7	1	23	1275	1298	1275	1298	0.96
13	16	0.01	1.7	10.4	0.9	1	23	1304	1327	1304	1327	0.96
14	16	0.56	95	5.0	3.6	2	23	1335	1357	1334	1357	0.95
15	16	5.2e-05	0.0088	17.6	1.0	1	23	1363	1386	1363	1386	0.97
16	16	1.8	3e+02	3.4	2.6	1	23	1386	1409	1386	1409	0.92

Sequence Information

Coding Sequence: ATGTATAATCTAAGATTCCTGATAGAAGAGAACCCACCTACCGTGGTCCTCCTGACGGAGACTTGGCTCAGAGAGTTTCATAATCTGAAAATAGCGGGGTACAACATCCTCAGACAAGATCGAACGAATCAGATTGGAGGAGGCATTGTCTCTTTCATTGGGAACAATCTGGCTTTCGCTGAGATTCCCTTCCGTCTGTCGTCCTGCCCTAGTTCCGTTCAGATACAGGGTTTTATTATCCTCAACTTCAACCTCACAATTGTTAATATCTATTGCCCTCCAAGTGTTGTTCTGCCCCTATCCTTCTGGGACGAACTATTAACTGGCATTTCATCTCCGTTCATCATCAGTGGGGACTTGAATGCCCAGAATCCTAACTGGGGTTCCGGCTTTTTCACACAAAATGGTAAAATTCTGGAGGAGCTGCTGCTTCTTAATGATATATGTATCTTGAATGATGGCACCCCCACTAGAATAACTCCTCCGAACGCGAATCCAAGCGCTCCTGACATAACCCTGTGTTCTAGCGATATAGGGTTGATCTCCTTGTGGAAGGTTATCCCAGATCCAGGACGAAGTGACCATTTGCCAACTTTGACTTCCATTGGCATGGATTCCCAAATTCCCCCACATATCAGTTCCCATTTCTCCACTAGAAAGTATAGCATAGGAAGAGCGGATTGGTCCAAATATCAGCAAGTAATCATTGACGGTATGGAGTCACAGACTCCCAGATCCCTACAGGAGTTCAGAGATCGAGTGTTGGAGGCGGCTGAACATTCTATCCCTAGAAAACATCAACCCCGCCATTCTTCTTATAGAAAATCATGGTGGAATGAAGACCTCTCTGCCCTCGTTAAAAAAAGATCGCAGGCGTTTAAGGCCTACCTTGAGGATCCATCCATAGAGCAATTTCTACGAGCAAAAAATATCCAAGCGCTAACGAGGAACAAAATCCGACAAACCAAAAAAGACTCCTTTAGATCTTTTTGCGAAAATTTGTCCCCTCAAAATGCAAAAAAATTATGGTCCGACGTTAAAAAATTTAAATTAGGTTGTCGACCCCCAGTTATCCCGGTCTCCTCTCCCTCCTGTGGTCAGGAAATTCTCGAAAGACTGTGTCCATCCGGGCCCGTCATCCTTCAGCGACCTCCTCCACCCAGAGTTCATCGACCTCTGTCTTTTCCTCCAATTACGTTGGATGAGGTATCTTCCTGTATCAGGTCAAAAAAGGATTCTGCCCCAGGATTGGATGGTATCACATACAGCATGCTGAATTACCTTCCCCTTCAGGCCAAACAACTTCTTACCAATCTTCTGAACGATCTGCTCACATCCCCCTCAGTCTGCCCATCGCTCACTGAAGTGCTAGTTATTCCCATATGCAAACCTAAGAAGGACCCTAATGATCCGCTTAGTTACAGACCGATAGCACTGACTTCTTGTCTTCTGAAGATCCTTGAATCCCTGGTGGCTGTGAGAATAGAGAAACTTTACGAAACATTCAACGATCCTCGCGATTTCCAATTTGGGTTCCGCAAAGGAAAATCAACTAATGACGCTCTATCCCTATTGATTTCGTCCATCTACTCCTCATTCAACCGTAATGAAGTCGTCTTAGTGGTTTTCCTAGACATCAAACAGGCATATGACTCTATACAGTTTCATCTCTTGGAGGACTCGTTGCTGTCCATCGGGGTTCCTCGACCTGTGATAGAGCTGCTTAGATCCGTGTTCGTCAATAGAAAGATATTCCTACTGGACCCATATTCTAAAAAAACTCTTGGTCCCAAACATTCCACCCTGGGCATATCTCAAGGCGCCCCAGAGAGTCCAGTCCTGTTCAATGTCTTCGTCAGAGACTTGCATTTATATGTTAACATTCCTGGTGTGACGGTTCTGAAATATGCTGATGATACCACGCTTGTAGTCTCGGCCCCCGATTTCCCTACAGCTTATCAAAAAATGACTCAGGCTTTATCTTCGGTTGAGAGGTGGGCCTCTTCCAAGCAATTTCAACTGTCGCCAAACAAAACAATCGCTCTCTGCTGCCATAAGACAGCGAAGTTGAACTCCAACCCACCCCTAAAATTGTGTGGGGCTGATATTCCGTGGGTCGAACAAACAAAATATTTGGGAGTTACCATCCATCAAAACCTGAAATGGAATACGCACATTGAAAGAATGTGTGCCGGAGCTTCCCAAGGAGTTAATTTGATGAAGTCGTTGTGCAGAACTTGGTGGGGCTCTCAGCCTGAAACGCTGTTGCTGTTGTATAGGGCCATGGTTCGTCCATATCTCGATTATGGTTGTTCCTATTATGGGAATTGTCCTAAGACCCTCATGACCAGGATGGATCGGGTGCAGTACGCTGCGCTGCGAGTTGCTATGGGTTACATGAGATCCACTCCTATCCCCATCATTCTGGCCGAATCTAGGGAGTTACCGCTCAATATCCGTAGAACCTGGTTGGCGATCAAATTTTTATCCAAACTAGCTAAGATCACGAACAACCCGGTCCTTCTGAAAATCAAATCCTTGGAACCCTGGCTAGGCCGTGGTAATCCTCCTCCTCTAGTTGAAGCCTTGCCTCTGCTGACTGCTGGATATTATTCCTCTCCTCACCTTCCTTGCTTCGCTCATTCTGGTTCTTTGAGGTACAGTTGCGAAAAGTGTGATTACTCTTCGGCGAGGAAGAAGGATGTCAGGAGGCACGTGGACTCGGTTCACCCAAAATTCAAATGCGAGATATGCAAATATGTTTCGAATAAAGAGGAAGATTTCCGAACGCACCAAGATACAGTTCACAGAGAACGTAAACCTTACAATTGTCGCTTGTGTGAATTCGCTACCGACTGTGAGGATGATTTGGAAATACATAAAGATTCCGCACATTCCAAGCGGTACAAATGCGCCAGCTGTGATTTCTGTACGAAATGGAGGAAAGAGCTCAGGAAACACTTGGATGTCTTTCACACAGAAAAATATGAATGCGATTCGTGTGAATTCGTTACGAATCAAGAAACCGACCTCCAAGCGCACCGAGATTCCATTCATTGCGATCCTGACACTCTCGACTGCAATCTATGCGAGTATATTGCGAATTGCACGAGTGACTTGAAAAAACATAAATCTTCAGTTCATCCTGACGCCCACAAATATAAATGCGACAAATGCGACTACTCTGCAAAGAGGCAAAGATTTCTTCTGAAACACATGGTTTCTGCCCATCCCGAATCCGAACGCGATGTTGATTCAAATTCGGAAAATGATGCTGTTACTGATGATTCCGATACTGAGCATAAATGCGACCAATGTGATTACGTTACGAAATGGAGAAAAGATCTCAGGAGGCACGCAGACGCCGTTCATCTAAATCATAAGCCGAATAGGTGCCGGCTGTGCGACTTTTCAACGAAAGAAAGTTATAACCTCCAAAGGCACATCGATTCAGTCCATCGCAACGCTTGGACTTTCAAATGCGAGTCTTGCGACTACGCCGCCAGCCAAAAGAAGGACCTCGAGGCCCACGTGCAATCAGTGCACGAGAATTCGAAACTTTTCAAGTGTACCTTATGCGACTACTCTTGCAATCGTAAAAATTATCTTGACCAACACACCAATTCCGTCCATTTGAAGCTATACCAGTACAAGTGTCCAGAATGCGTGTATTCTACAAACAGGAGGCACCATCTGGACAGGCACATCCAGTCGGTTCATTCAAACGCGAAGGAATTTCAGTGTCCCTTATGCGAGCACGCGACAAATCAAAAGGGCAATCTTAAAATCCACATGGATGCTGTTCACTCGAAAGCAAACCTGTTCAAGTGTCATATATGCGATTTTTGCACGGCATATAACACCGAACTCGTAGGGCATATAGATTCAATTCATTTCAACGAGAAAAAACATGAGTGTGCATTTTGCGATTATAGAACGAATAGGATTGGAGATCTCAGAAAACATGTAAATTCCGTTCATTCAACCTCGCAAAATACTATAAAGTGTCAGTCGTGTGATTATACGACCAATTGTTCACGGAATCTTAAGAGGCATACAGATACCGTACATCAGGAATACAAACCGTATAAATGTGAAATTTGCAATTATGCCACAGCTCACAAAAATAATCTCAAAAATCATGTGAATTCTGCTCATAAGTGTCACTTATGCGACTTTACCGCAGATCATGACGATGATTTAGGAAGGCATTTCGGCACTGTTCATCCTGATTTAGAGCTAGGTACCCAACAACCCCAAGAGGGACAACAAATAATCAGCCCACAAAGGGACAACAAGGGATCGCCGGATAGGGATCACCTCAACGCAACAAGGGGTCACCAGAAAAAGGGACCACCACAATTCAACAAGGGATCGCCAGAAAGGGATCACCAAAAAATCAATCCAAGGGTAACCTAG
Protein Sequence: MYNLRFLIEENPPTVVLLTETWLREFHNLKIAGYNILRQDRTNQIGGGIVSFIGNNLAFAEIPFRLSSCPSSVQIQGFIILNFNLTIVNIYCPPSVVLPLSFWDELLTGISSPFIISGDLNAQNPNWGSGFFTQNGKILEELLLLNDICILNDGTPTRITPPNANPSAPDITLCSSDIGLISLWKVIPDPGRSDHLPTLTSIGMDSQIPPHISSHFSTRKYSIGRADWSKYQQVIIDGMESQTPRSLQEFRDRVLEAAEHSIPRKHQPRHSSYRKSWWNEDLSALVKKRSQAFKAYLEDPSIEQFLRAKNIQALTRNKIRQTKKDSFRSFCENLSPQNAKKLWSDVKKFKLGCRPPVIPVSSPSCGQEILERLCPSGPVILQRPPPPRVHRPLSFPPITLDEVSSCIRSKKDSAPGLDGITYSMLNYLPLQAKQLLTNLLNDLLTSPSVCPSLTEVLVIPICKPKKDPNDPLSYRPIALTSCLLKILESLVAVRIEKLYETFNDPRDFQFGFRKGKSTNDALSLLISSIYSSFNRNEVVLVVFLDIKQAYDSIQFHLLEDSLLSIGVPRPVIELLRSVFVNRKIFLLDPYSKKTLGPKHSTLGISQGAPESPVLFNVFVRDLHLYVNIPGVTVLKYADDTTLVVSAPDFPTAYQKMTQALSSVERWASSKQFQLSPNKTIALCCHKTAKLNSNPPLKLCGADIPWVEQTKYLGVTIHQNLKWNTHIERMCAGASQGVNLMKSLCRTWWGSQPETLLLLYRAMVRPYLDYGCSYYGNCPKTLMTRMDRVQYAALRVAMGYMRSTPIPIILAESRELPLNIRRTWLAIKFLSKLAKITNNPVLLKIKSLEPWLGRGNPPPLVEALPLLTAGYYSSPHLPCFAHSGSLRYSCEKCDYSSARKKDVRRHVDSVHPKFKCEICKYVSNKEEDFRTHQDTVHRERKPYNCRLCEFATDCEDDLEIHKDSAHSKRYKCASCDFCTKWRKELRKHLDVFHTEKYECDSCEFVTNQETDLQAHRDSIHCDPDTLDCNLCEYIANCTSDLKKHKSSVHPDAHKYKCDKCDYSAKRQRFLLKHMVSAHPESERDVDSNSENDAVTDDSDTEHKCDQCDYVTKWRKDLRRHADAVHLNHKPNRCRLCDFSTKESYNLQRHIDSVHRNAWTFKCESCDYAASQKKDLEAHVQSVHENSKLFKCTLCDYSCNRKNYLDQHTNSVHLKLYQYKCPECVYSTNRRHHLDRHIQSVHSNAKEFQCPLCEHATNQKGNLKIHMDAVHSKANLFKCHICDFCTAYNTELVGHIDSIHFNEKKHECAFCDYRTNRIGDLRKHVNSVHSTSQNTIKCQSCDYTTNCSRNLKRHTDTVHQEYKPYKCEICNYATAHKNNLKNHVNSAHKCHLCDFTADHDDDLGRHFGTVHPDLELGTQQPQEGQQIISPQRDNKGSPDRDHLNATRGHQKKGPPQFNKGSPERDHQKINPRVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00349489;
90% Identity: -
80% Identity: -