Csep010762.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- -
- Assembly
- GCA_907165205.1
- Location
- OU015574.1:309589-328511[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.27 46 5.9 1.2 2 23 230 252 229 252 0.97 2 34 0.11 18 7.2 0.3 1 22 255 276 255 278 0.90 3 34 0.0013 0.23 13.2 1.8 1 23 539 562 539 562 0.97 4 34 0.0016 0.28 12.9 2.4 1 23 568 591 568 591 0.96 5 34 3 5e+02 2.7 5.1 1 23 597 620 597 620 0.97 6 34 0.00054 0.091 14.5 1.8 2 23 627 649 626 649 0.96 7 34 0.71 1.2e+02 4.6 0.7 1 23 658 681 658 681 0.96 8 34 0.049 8.3 8.3 2.6 2 23 688 710 688 710 0.91 9 34 0.068 11 7.9 0.6 1 23 716 739 716 739 0.97 10 34 0.00036 0.061 15.0 2.9 1 23 745 768 745 768 0.96 11 34 0.0018 0.31 12.8 0.8 2 23 775 797 774 797 0.96 12 34 0.00095 0.16 13.7 2.6 1 23 803 826 803 826 0.96 13 34 0.0033 0.57 12.0 1.7 1 23 832 855 832 855 0.97 14 34 0.0075 1.3 10.9 2.1 1 23 860 883 860 883 0.98 15 34 0.0006 0.1 14.3 2.8 1 23 889 912 889 912 0.96 16 34 0.0017 0.29 12.9 0.7 2 23 919 941 918 941 0.96 17 34 0.0026 0.44 12.3 2.1 1 23 946 969 946 969 0.98 18 34 0.014 2.4 10.0 4.2 1 23 975 998 975 998 0.96 19 34 0.003 0.51 12.1 1.6 1 23 1004 1027 1004 1027 0.97 20 34 0.012 2.1 10.2 2.1 1 23 1032 1055 1032 1055 0.98 21 34 0.12 20 7.1 0.1 1 23 1182 1205 1182 1205 0.98 22 34 0.00064 0.11 14.2 0.2 2 23 1209 1231 1209 1231 0.92 23 34 0.00036 0.06 15.0 1.5 1 23 1237 1260 1237 1260 0.91 24 34 0.005 0.85 11.4 2.6 1 20 1295 1314 1295 1315 0.95 25 34 0.012 2.1 10.2 0.5 1 23 1324 1347 1324 1347 0.96 26 34 0.021 3.5 9.5 2.2 1 23 1353 1376 1353 1376 0.94 27 34 0.0027 0.46 12.3 3.0 1 23 1382 1405 1382 1405 0.97 28 34 0.083 14 7.6 3.1 1 23 1411 1434 1411 1434 0.94 29 34 6.9 1.2e+03 1.5 0.2 1 23 1440 1463 1440 1463 0.76 30 34 0.015 2.5 9.9 3.2 1 23 1469 1492 1469 1492 0.94 31 34 0.0044 0.74 11.6 1.3 1 23 1498 1521 1498 1521 0.96 32 34 0.004 0.68 11.7 2.9 1 23 1527 1550 1527 1550 0.94 33 34 0.00043 0.073 14.8 0.5 1 23 1556 1579 1556 1579 0.97 34 34 0.036 6.1 8.7 3.7 2 23 1586 1608 1586 1608 0.97
Sequence Information
- Coding Sequence
- ATGCAGCAAATTTTGAAACTAGTGAATGGTGATGATAATCCATTTAAGTGCGCTGTTTGTAATCATTATTTGTCAATATCGCCCATTGTGCACAATGATGTTTTGGGTAGCATTTGCGGACGAGACCGCTGTAAGAAGTTGGCAGTTTCGCAAGGTACAAATTATCGACAAAAAGCCTATGAGGGAGTGAAGTTAGAAGAAAAATTTGGAATCATGGACAGCTCAGAACAATTCGAAGGCGAAGGAATTCATGATAGAGAGAAATATGTAATTAAGAATGAAGAAAGTAACTCAAATTCCTCGGATATAGATCATTCACCTGCCTCTTTCAGCAATGAAATGCCTCAAGTATTATGTCTACCAAGTATTAAATCTGAATTGGTTCACTTGGACCATTGCGAAGAAAAATATCTTGATGAACACATACAGAGTGACCTTACTGCCAGTCCTAAAGATGAGGAAAAATGGCATGTTAAATTAGGAACCCTAGATATTTGTGAACAATTTATAGATGAGGAAGGAGTTCATGATAGAGAAGACTATATAGCTAAGAATGAAGACAGTAACTCAAATTCCTCTGTTATAGAAATCGATACAAATCAATCACTTGACGCTTTTAACAAAGAAATACATGGAATATTGGATCCAGCAAGTATTGAATATCTTCCTTCAAATATCAAGAATAAGAAGTGCCATTTGTGTGATTTTGAGACCATCTATGAAAAAGACTTTGCTTTACACATCAAATCTGTTCATTTTATTTTTAGGTGTGAATTTTGCGAGTTAGTTACAAATGAAAAAGATAAACTTAAACAGCATGTTGGCTTGGCTCATTCACTTGCCAAAAACCACAAGTGTCACTCATGCAAATATGCTACAAGAGGAAAAATGGATAGAGATGAACGAAGTATTGATGTCAAAGAAGAGGTACATATTATTCACGATGAGGTGAAATTAGAAGTTTCTGAACAATTTATAGATGAAAATGGAGTTTATGGAAGAGAAGAATATAAAATTAAGAATGAAGAAATCAACTCTAATTCCTTAGTTATAGAAGTATTACATTCGCCTGGCAATAAATCTGAACCAGAATATCACTTGGTTGATTATCCTGCAGGTGAAGAAAAATATCTTGATAAACACATACAGTATGATCATACCTCCAGTTCTATAGATGACAAGAAACGGCGGACTAAATTAGGAGTCGTAGATATTTCTGAACAAGTTATAGACAAAGAAAGAGTTCATGATAGAGAAGAATATATAATTAAGAATGAAGGCAGCAACTCAAATTCCTTAGTAACAGAAGGCGATGCAAATCATTCATCTGCCTCTTTAACTGAAGAAATTCCCGGAGTATTAGATCCAGCAAGCGATGAATCTCTTCCTTTGAATATTAAGAATCACAAGTGTGCCTCTTTTAAAGGAAAAGAGCCTAAAGTATTAGATTCTCTGATGAATAACTCTGAAACAGTTCACTTGGAGCAGAATGAATGTAATAACAGATGTCCTTCGAGTGAAAAACATGATCTTGGAACTCGCATCCAGTGTGGTTCAAGTTCAAAAGATCGCAATAAAAAAAAGGTAAAGTCCATCCATTCAAATATCAAAAATCACAAGTGTGACTTATGTGACTTTGTTACAAATAGAAAATGGGAACTTAAAAATCATACAAACTCAGTTCATTTAAATATCAAAAAACACGAATGTCACTTATGTGACTATGTTACAAATAAAAACTGGGACCTTCAAAAGCATGTCAATCGTGTTCATCTGAATATTAGAAAACACAAGTGTCATTTATGTGAATTTGCTTCATGTGAAAAACAAAAACTGGATGTACACATTAAATCCGTTCACCTGAAAATCAAAGAAAACAAGTGTCATCTATGTGACTATGATACAAGCACCAAAAGTACTCTTCAAACCCATATTGAATCTGTTCATATGAGAATTAAGAAAATTAAGGATCACAAGTGTAACTTATGTGAATTTGCTGCAAGCTCGAAAACCGTCCTTGATAATCATGTGAAATCTGTTCATTTAAAAGTCAAGGATAACAGATGCCATCTATGCGAGTATGTTGCATGTAGAAAAGATACTCTTCAAAATCATATCGATTTTGTTCACTTAAATATCAAGAAATACCAGTGTGACCTATGTGAATATGCTGCGAGTGTCAAGAAATGCCTTGTAGCGCATGTTAAGTCAACACATTTGAAAAGTAAGGAGCACAAGTGCCATTTATGCGACTACGATACAGAAAGAAAAGAAAATCTTCAAAGGCACATCGATTCTGTTCATTTGAAAATCAAGCAACAACAGTGTCATCTATGCGACTATGTTGCATCCGAAAAAAGTAGCCTCCGATATCATATCAATTCTGTTCATTTGAAAATTAAGGAGCACAAGTGCCATTTATGCGACTACGATACAGAAAGAAAAGGAAGTCTACAAAGACACATCGATTCTGTTCATTTGAAAATCAAGCAACATCAGTGTCATCTATGCGACTATGCTGCAACCGTGAAAGATAGCCTCCGATATCATATCAATTCTGTTCATTTGAACAAGCAACATCAGTGTCATCTATGCGACTATGTTGCATCCGCAAAAAATAGCCTCCGATATCATATCAATACTGTTCATTTGAAAATTAAGGAGCACAAGTGCCATTTATGCGACTACGATACAGAAAGAAAAGTAAATCTTCAAAGGCACATCGATTCTGTTCATTTGAAAATCAAGCAACAACAGTGTCATCTATGCGACTATGTTGCATCCGAAAAAAGTAGCCTCCAATATCATATCAATTCTGTTCATTTGAACAAGCAACATCAGTGTCATCTATGCGACTATGTTGCATCCGCAAAAAATAACCTCCGATATCATATCAATACTGTTCATTTGAAAATTAAGGAACACAAGTGCCATTTATGCAACTACAATACAGAAAGAAAAGAAAGACTACAAAGACACATTGATTCTGTTCATTTGAAAATCAAGCAACATCAGTGTCATCTATGTGACTATGCTGCATCTGTAAAAGATAGCCTCCGATATCATATCAATTCTGTTCATTTGAACAAGCAACATCAGTGTCATCTATGTGACTATGCTGCAACCGCAAAAAATAGCCTCCGATATCATATCAATACTGTTCATTTGAAAATTAAGGAACACAAAATAAAGTTAGAAAAAAAATTAAGTATTCTGGACATTTTCGAAGAATTCATCGACGCAGATGGAGTGCATGATAGAGAGAAATATATAATTAAGAATGAAGGAAGGAACTCAAATTCCTCGGTTATAGAAGTCGATACAAATCAATCACCATCCACTTCTACCAAAGCATTGCCTCTTGTATCAGAAACGCCGAGCAATAAATCTGAGCCAGTTTACTTTGAGCAGTGGGAATTTCCTGAATATCACTTGTTTGATCATCCCGTAGATCAAGAAGGATATCTTGATAAACACCATACTGCCGGTCCTAATGATGACAAGAAATGGCATGTTAAATCTCTTCCTTCGAATACCGAGAACTACAAGTGCCTTATGTGTGATTTTGAGATCAATTATGAGACGGAGCTTGCTTTACATATCAAATCTGTTCATTTCATCGCTAAGTGTGAAGTTTGTGACTATATTACAAGTACAAAAGATAACCTCAAACAGCATGTCGATTTGATTCATTCAAATATCAAGAAACACAAGTGTCACATATGCGAGTATGTTACAAGTAGAAAATGGGACCTTCAAAAGCACGTTGACGCCGTTCATTTGAATATCAAGAAACACGAATGTCAATTATGTGATTACGCTGCCAGCGAGAAACGAATCATCCAACAACATGTGAAATCTGTTCATTTTAAAATAAAGGAACACGAATGTCAACATTGCGACTTTGCTACAAGTACTAAAGTACACCTCCGAAAGCACGTTGACTGCGTTCATCTGAATATCAAGAAACACGAATGTCAATTATGCGAATATGCTACGAGTAACAAAAAAGGCCTTGAATTACACGTGAATTCCGTTCATTTGAAAATTATGGAACACAGGTGTCATTTATGCGAGTACGTTACAAATAGAAAACCCAGCCTTCGACTGCATGTTGACTCCGTTCACTTGGGTATCAAGAAACACAGATGTCACTTGTGCGAATACGGTACGAGTAAAAAGAACGATCTTGAAGTACACATGAAATCTGTTCATTTGAAGATTATGGAACACAAGTGTCAACATTGTGAATATGTTACGAATAGGAAAAATGTGCTTCTGAAGCATGTCGACTCTGTTCATTTGAAGATCAGGAATCACGAGTGTCCCTTATGTGATTATGCGGCAAGCGAGAAACGTATCGTCGAACAACATGTGAAATCCGTTCATTTGAGAATTAAGGAACACAAGTGTCAGCATTGCGAGTATGCCACGAGTACCAAAGGGTTCCTTCGAAATCATGTCGATTCTGTTCATTTGAACGTCAAGAAACATAAATGTCACTTATGCGAATATGCTGCGAGTAGAAAGATAGACCTCGAGGTGCACATAAAATATGTTCATTTCAAAATTATGGAGCACGTGTGTCATTTATGCGATTTTGTTACGAATAGAAAATACAGCCTTCGACAGCACGTGGACTCTGTTCATTTGGCCATCAGGAAATACAAATGTCACCTTTGCGATTATGCTGCGATTAGAAAAAACGAACTTAAAGTGCACATAAATTTGGTTCATCTGAAAATTAGGGAAAGGAAATGTTGTATGTGTGAATATGTCGCGAGTTCGAAACATTACCTTCAACTGCATATGAAGTCTGTTCATTCAAATGGCAAGTAA
- Protein Sequence
- MQQILKLVNGDDNPFKCAVCNHYLSISPIVHNDVLGSICGRDRCKKLAVSQGTNYRQKAYEGVKLEEKFGIMDSSEQFEGEGIHDREKYVIKNEESNSNSSDIDHSPASFSNEMPQVLCLPSIKSELVHLDHCEEKYLDEHIQSDLTASPKDEEKWHVKLGTLDICEQFIDEEGVHDREDYIAKNEDSNSNSSVIEIDTNQSLDAFNKEIHGILDPASIEYLPSNIKNKKCHLCDFETIYEKDFALHIKSVHFIFRCEFCELVTNEKDKLKQHVGLAHSLAKNHKCHSCKYATRGKMDRDERSIDVKEEVHIIHDEVKLEVSEQFIDENGVYGREEYKIKNEEINSNSLVIEVLHSPGNKSEPEYHLVDYPAGEEKYLDKHIQYDHTSSSIDDKKRRTKLGVVDISEQVIDKERVHDREEYIIKNEGSNSNSLVTEGDANHSSASLTEEIPGVLDPASDESLPLNIKNHKCASFKGKEPKVLDSLMNNSETVHLEQNECNNRCPSSEKHDLGTRIQCGSSSKDRNKKKVKSIHSNIKNHKCDLCDFVTNRKWELKNHTNSVHLNIKKHECHLCDYVTNKNWDLQKHVNRVHLNIRKHKCHLCEFASCEKQKLDVHIKSVHLKIKENKCHLCDYDTSTKSTLQTHIESVHMRIKKIKDHKCNLCEFAASSKTVLDNHVKSVHLKVKDNRCHLCEYVACRKDTLQNHIDFVHLNIKKYQCDLCEYAASVKKCLVAHVKSTHLKSKEHKCHLCDYDTERKENLQRHIDSVHLKIKQQQCHLCDYVASEKSSLRYHINSVHLKIKEHKCHLCDYDTERKGSLQRHIDSVHLKIKQHQCHLCDYAATVKDSLRYHINSVHLNKQHQCHLCDYVASAKNSLRYHINTVHLKIKEHKCHLCDYDTERKVNLQRHIDSVHLKIKQQQCHLCDYVASEKSSLQYHINSVHLNKQHQCHLCDYVASAKNNLRYHINTVHLKIKEHKCHLCNYNTERKERLQRHIDSVHLKIKQHQCHLCDYAASVKDSLRYHINSVHLNKQHQCHLCDYAATAKNSLRYHINTVHLKIKEHKIKLEKKLSILDIFEEFIDADGVHDREKYIIKNEGRNSNSSVIEVDTNQSPSTSTKALPLVSETPSNKSEPVYFEQWEFPEYHLFDHPVDQEGYLDKHHTAGPNDDKKWHVKSLPSNTENYKCLMCDFEINYETELALHIKSVHFIAKCEVCDYITSTKDNLKQHVDLIHSNIKKHKCHICEYVTSRKWDLQKHVDAVHLNIKKHECQLCDYAASEKRIIQQHVKSVHFKIKEHECQHCDFATSTKVHLRKHVDCVHLNIKKHECQLCEYATSNKKGLELHVNSVHLKIMEHRCHLCEYVTNRKPSLRLHVDSVHLGIKKHRCHLCEYGTSKKNDLEVHMKSVHLKIMEHKCQHCEYVTNRKNVLLKHVDSVHLKIRNHECPLCDYAASEKRIVEQHVKSVHLRIKEHKCQHCEYATSTKGFLRNHVDSVHLNVKKHKCHLCEYAASRKIDLEVHIKYVHFKIMEHVCHLCDFVTNRKYSLRQHVDSVHLAIRKYKCHLCDYAAIRKNELKVHINLVHLKIRERKCCMCEYVASSKHYLQLHMKSVHSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -