Csep009087.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- ZNF526
- Assembly
- GCA_907165205.1
- Location
- OU015573.1:65947057-65955440[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 7.7 1.3e+03 1.4 0.0 6 23 252 269 252 269 0.94 2 19 0.00034 0.057 15.1 4.9 1 23 275 297 275 297 0.98 3 19 2.9e-05 0.0049 18.4 2.5 1 23 303 326 303 326 0.97 4 19 0.039 6.6 8.6 3.7 1 23 333 356 333 356 0.92 5 19 0.00016 0.027 16.1 2.2 1 23 361 383 361 383 0.98 6 19 0.0036 0.6 11.9 1.4 2 23 393 415 392 415 0.94 7 19 2.3e-07 3.9e-05 25.1 1.6 1 23 420 442 420 442 0.97 8 19 4.9e-06 0.00083 20.9 0.6 1 23 448 470 448 470 0.98 9 19 1e-05 0.0017 19.9 1.0 1 23 476 499 476 499 0.97 10 19 4.7e-07 7.9e-05 24.1 0.4 1 23 505 527 505 527 0.98 11 19 0.0026 0.44 12.3 2.0 2 19 607 624 606 627 0.93 12 19 0.83 1.4e+02 4.4 0.2 1 23 634 657 634 657 0.92 13 19 4.3e-06 0.00072 21.1 0.9 2 23 665 687 664 687 0.96 14 19 3.7e-05 0.0063 18.1 3.0 1 23 692 715 692 715 0.96 15 19 0.23 38 6.2 4.2 1 23 724 747 724 747 0.96 16 19 1.9e-06 0.00032 22.2 0.4 1 23 754 776 754 776 0.99 17 19 5.2e-06 0.00088 20.8 3.1 1 23 782 804 782 804 0.98 18 19 0.00025 0.041 15.5 2.2 1 21 810 830 810 833 0.94 19 19 7.2e-06 0.0012 20.4 1.2 1 23 839 861 839 861 0.97
Sequence Information
- Coding Sequence
- ATGATCAATTCTAGTGATATTTTACAATTATGTAGACTGTGCTTAGTGGAGGATAAAGTCAATCACCCAATATTCGAAGAGTCCGACGACTTGAGAAGTATATCCCTCAAAATATCTTCCTGTTTGCCAGTTTCGATCCACAAAGATGACAGTCTACCAAAAAAAATATGCGACACTTGCTCAACCAAATTGGATTCCTTTTACCAGTTCTGGAGTGAATCTGCTAATGCTGAGAAACAACTACTACAGTGGGTAGATAAAAACAAAACATCAAAACAGCAAGCAGATCAAAGCAGGAAGATGGAAACCACAGAAGTAAAAAAAGAACTTGAAGATACAGTGGATCCCATTGATATGACTTCAGAGGCTCAGACTTACATTTTGCAACAACAACAGTTGCCTTACACCTCCTCTGCTCCAAATGATTCCCTCAATACATCAGAATCTGAAGAACCTGCTGCTAAAAGGCCAAGAAGGGCTTCAGCTGTAAAAGCTTTACAGCATATGGGATCTGAAGATGAAGATGATGCGGAACTTGCAGCTGATAATTATGCCAAAACTGAGTCGGATGATAGTGATAAAGAGGAGGAAGATGAAGATAGCAACTATCAGGAGAACCCATCTACTACCTCTGTGGAAGACCAACCTGGTCCATCCGGAATGTCGAAGAAAAAAATGGTGCTGGATGACACACCATCCCTGGAACCGATATGTCAAGTTTTCGTTGACGAGGACTCGGACAATCCCTTCTGTTGCGGTGAAGACCTCTCTTCTCCGAACACTAGAGAGAAGCACTTGAAAGAGCACGAAGGCCCAAAGAAATTTACCTGTACAGAGTGCGACAAAAAGTTCGCCTGCAAATACCAACTTAAGGTTCACACGCAGACCCATCAAGAGACCAAAGAATACAAATGCACGCTTTGCGAAAGATCGTTTAAGACTGATAAATACTTGGAGAATCACATGAATTACAATCATATCAGGGGGAATTTCAGGCATCAGTGCGCCTGCTGCGACAAATCGTACAGATCGGAGAAGGAACTGAACCAGCACGTCGGCACCAAGCACTTGGGCGTCGTTTACAAATGCGAAATATGCTTCAAGGAGTTTTACAGCGACATGTATCTAAAAAAGCACATGTTACAACATGACGATAGCTACGTCCCCCCAACCGTACCATGCTCGCAGTGCGACAAGGTTTTTTCGTGCAAGAGGAGCCTCACTGTTCACGTAGAAAGCTTCCACAACGGCATCAGACACATCTGCGAGATATGCGGGAAGAGTTTGTCCACGCAGTATTCGCTAAGGCTACACATGCGAACGCACTCGGACGAGAAGCCTTTCGAGTGCGAAATATGCGGGAAGAGGTTCGCCAAGAGCAGTACGCGACAGGATCACCTGAGGATCCATACCAAGCAGAGACCGCACGTCTGTACGAAATGTGGAAAGGGCTTCACTCAGAGGACGCCGCTGATAACGCATATCAAATCGGTGCATGGAAGTGAGAGACCGTTTCAGTGTCCCATGTGTCCAAAAGCCTTCGCCACTAAATCTCTGTTGAAGACCCATTCGAAAGTCCACGGAAAACCGCTAGGTTCCTCGTTAACGAAAACGATAGAATCTAGGAGAAAAGACAAATCTTGGCTCAGAAGGGAGAACAAAAACAAAGAAAATATCGTTGAAACTGATGACGAAGAGGGACGAACAGAGGAAAAAAAATCCAAGGATACCAGAAAATGTAATGGAAATTTCGAAATCAAAGTGTCTTCCAAATATAAGCGGAAAAAATGTTACAAAAAGGACGACCCACGCAACATCCCTTGCAAAATTTGCAATAGGCGATTCACGTTCAATCACCTGCTGAAAATCCATTTTCATAACGACGTCGAGAAGAACGAGTACAGGTGCAGCCTCTGCGCCGATGTTTTTGGATCAGATTTCGACCTAAAGGCTCATTTGACCGATACACACTCTAAAGAGGCGCACAAACTAAAATGCGACCACTGTGGAAAAGGCTATACGTACGAAGGTGATCTTAGTAGGCACATCAGGATAAAGCACGAAGGGTTCATTCACAAATGCGATAAATGCGGAAAGGCCTTCAACAAAAGTCAAGCTCTCCAAGAACATATCCACATAAAACACGACGAGACATACGTAAAGCCTAAATACCCCTGCGTTTTCTGCGAGAAATTTTTTTCGTGCAAAAAAACGCTGACGTTGCACACGAAGAACATCCACTACGGTATGAGGCATTTTTACGTCTGCGATATGTGCGGAAAGAGCCTCGCAACACCGAATTCCTTCAGGAATCACCTGAGAACTCACACCAAAGATAAACCTTTCGAATGTTCCGTATGCGGAAAGAGGTTCGGCAGAAATCACCACCTCCAAGATCACCTCGTGACGCATACTAAGGAGAAGCCGCACATATGCTCCAGGTGCGGGAAGGCCTTCACCCAGAGGGCGCCACTTTTGAGACATATGAAGTGCGTCCATGAAACTGCTAGGCCTTACCAGTGTCTCATATGCTCCAAGTCCTTCGCTACCAAATCTCTGCTGAACTCGCACTCGAAATTGCACAACGTGATCAATTGA
- Protein Sequence
- MINSSDILQLCRLCLVEDKVNHPIFEESDDLRSISLKISSCLPVSIHKDDSLPKKICDTCSTKLDSFYQFWSESANAEKQLLQWVDKNKTSKQQADQSRKMETTEVKKELEDTVDPIDMTSEAQTYILQQQQLPYTSSAPNDSLNTSESEEPAAKRPRRASAVKALQHMGSEDEDDAELAADNYAKTESDDSDKEEEDEDSNYQENPSTTSVEDQPGPSGMSKKKMVLDDTPSLEPICQVFVDEDSDNPFCCGEDLSSPNTREKHLKEHEGPKKFTCTECDKKFACKYQLKVHTQTHQETKEYKCTLCERSFKTDKYLENHMNYNHIRGNFRHQCACCDKSYRSEKELNQHVGTKHLGVVYKCEICFKEFYSDMYLKKHMLQHDDSYVPPTVPCSQCDKVFSCKRSLTVHVESFHNGIRHICEICGKSLSTQYSLRLHMRTHSDEKPFECEICGKRFAKSSTRQDHLRIHTKQRPHVCTKCGKGFTQRTPLITHIKSVHGSERPFQCPMCPKAFATKSLLKTHSKVHGKPLGSSLTKTIESRRKDKSWLRRENKNKENIVETDDEEGRTEEKKSKDTRKCNGNFEIKVSSKYKRKKCYKKDDPRNIPCKICNRRFTFNHLLKIHFHNDVEKNEYRCSLCADVFGSDFDLKAHLTDTHSKEAHKLKCDHCGKGYTYEGDLSRHIRIKHEGFIHKCDKCGKAFNKSQALQEHIHIKHDETYVKPKYPCVFCEKFFSCKKTLTLHTKNIHYGMRHFYVCDMCGKSLATPNSFRNHLRTHTKDKPFECSVCGKRFGRNHHLQDHLVTHTKEKPHICSRCGKAFTQRAPLLRHMKCVHETARPYQCLICSKSFATKSLLNSHSKLHNVIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -