Csep021972.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- znf711
- Assembly
- GCA_907165205.1
- Location
- OU015577.1:25711266-25719654[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.001 0.17 13.6 0.2 2 23 87 108 86 108 0.97 2 24 0.00059 0.099 14.3 1.9 2 23 115 136 114 136 0.97 3 24 0.0019 0.31 12.8 0.1 1 23 142 164 142 164 0.96 4 24 7.6e-05 0.013 17.1 0.0 2 23 169 190 168 190 0.96 5 24 0.00092 0.15 13.7 0.7 1 23 196 218 196 218 0.98 6 24 0.0042 0.72 11.6 2.3 2 20 232 250 231 253 0.93 7 24 8.5e-05 0.014 17.0 2.5 1 23 278 300 278 300 0.98 8 24 8.2e-05 0.014 17.0 0.8 1 23 306 328 306 328 0.96 9 24 0.0042 0.71 11.6 4.2 1 23 334 357 334 357 0.96 10 24 7.4e-05 0.013 17.2 2.0 1 23 367 390 367 390 0.98 11 24 3.2e-06 0.00055 21.4 0.4 1 23 465 487 465 487 0.98 12 24 0.0072 1.2 10.9 1.0 5 23 496 514 493 514 0.95 13 24 0.03 5 9.0 0.3 2 23 518 539 518 539 0.98 14 24 0.00011 0.019 16.6 1.9 2 23 574 595 573 595 0.97 15 24 5.6e-05 0.0095 17.5 2.7 2 23 602 623 601 623 0.98 16 24 1.3e-05 0.0021 19.6 2.1 1 23 626 649 626 649 0.97 17 24 0.14 24 6.9 2.4 1 21 655 675 655 676 0.93 18 24 1.4 2.3e+02 3.7 1.1 2 21 952 971 951 972 0.89 19 24 0.0018 0.3 12.8 1.7 1 23 1017 1040 1017 1040 0.96 20 24 3.1e-07 5.3e-05 24.7 1.9 1 23 1047 1069 1047 1069 0.99 21 24 3.5e-07 6e-05 24.5 0.7 1 23 1075 1097 1075 1097 0.98 22 24 0.00074 0.13 14.0 1.1 1 23 1105 1127 1105 1127 0.98 23 24 4 6.7e+02 2.3 9.5 1 23 1133 1156 1133 1156 0.88 24 24 6.5 1.1e+03 1.6 1.5 1 23 1333 1356 1333 1356 0.94
Sequence Information
- Coding Sequence
- ATGGAAGATATAAATTCTTATATTGTCCTTCCTTTGAATGCCGATGAATCTATCTTCATCCCTAATCTCATTTCCGGCTATTTTCCAAATTTATATGTTGCTGAATCTTGTAATCAAAAGCCCCTTACTAATCAAGAGCTTGTTCCACCTAGTAAAGGGGAAGAGGAACATGTTAATAATCAAAATTTGGTTCTTGAGCCAGTACATTCAAATTATCAATTTGATCCCTATGAAGTCTCTTCTGAAAATACTGTAATAAAATGTCCAAAATGTGATGCTTCTTTCAACGATATAAATCTATACACTGTGCATGAGAAAACTCACCAAGATAACAATAAATTAGAGTGTAAAAAATGCTATCAAACATTCAGTCAGGTGGAAACATATAAAAAACATCTATTAACACATCAGGAGGATAAGCTCTTCAATTGTGTTATATGCAATGCTGGTTTTAATTTTGAAAATAATTTGAAAGTACATATGGCACTACATGGAAAGTCATTAGTGTGTCCTATATGTGGGTTATCATTCCAAAGAACAGCTAGTTTGAAGTCACATTTAGCTATACATCAAGTTGAAGAATTTCATACTTGTCCAGAATGCGCATCAGAATTTGATAGTATGGATGACCTGAAAAAACACATCAAAAGCCATATTAAACAGGTTGATGTTGAACCTCCATCACATGAATTGATCTGTAAATATTGTAAAGTAAAGTTTTCTACTGAAAAGCAGTTGAATCAACATATTGCCTGTCATTTGAAGGTAAAAAAACTTGTTCTCAATGGGAAAAAACCAAAAAAAGAACAAGCTTCACAAAAAGAGCACAAGCATAAATGTAATGTTTGTAATAAGTCTTTCCTCAAATTGTCTTTACTTGAAAGACACTTGAGGATTCATAAGGGAGAACGTCCATATTTGTGTCAACTTTGTTCCAAAGGCTTCACACAAAAAGGAACACTCCAAATCCATTTATTGAAACATTCTGGTATAAAGCCATTTTGCTGCACGTTATGTCCAGCAAAGTTCCATCAGAAAGGTAATTTAAAAGTACATGTTCAAAAAACACATACAGCAGCTGAAGAGGGAGAAAAAACATTCAAATGCTCTGAATGTGACTGCATCTTCAAAAAACTGGCTTCACTGAATGGGCATATGAGAAAAATTCATTCGGATTTCGGTTTAATCAACATAACTACAGTTATCGATCAGTTGAAGAGTCTAGAAAAACAATTAGGAGGAAATGCTGCAGAATCAAAGGAAAATCAAGTCATTGAAAATCCCTCAAATCCGGTTAATCCCACACCTGATGATATTCCTAAGGAAAATGAAACAAATGAAAACTGTAAAGTGTATTCTTTAAAGCAAAAATTTGATGGATCAAATAAGGTTTACATTTGTTCTTATTGTAATAAGGAAGCTAAAAAACCATCAGATTTAATTCGTCATATACGGACACATACAAAAGAAAAACCATTCAAGTGCCAGTGTGGTAGCTCATTTGCCCTAAAGTCAACCCTTCAATCACATATGAAGGTGCATAAAGGAAGAAAATGTGAGAAATGTTCTAAAGTTATTGCGTCAGCCAAAGTATGGAAAGCTCACTTAAGAAAGCATGAAATCAACAAAAATGAAGTGAAACAACAAGATTGCCTTGACATTGCAGTACCTTCAGATTCCCCAATAAATAGACATACAATAATTTCGGACAAACCTTTAAAATGCCAATTGTGCTCATCATCATTTTCGAAGAAAGAAAATCTTAGTCAACATATGCGCTTACACACAGACGAAAAAGCATCCAAGTGTCCAGTATGTGAAAGATTATTCACATCTTCCCATACTTTGAAGCAGCATATGCAAAGCCACTCAGACTTCAATTGCCATTTGTGTGACAAAAAATTCAAAAATGAATCATTATTGGAACAACATGTTTCAACAATTCATGATGATTCAAAACTATATGATTGTCCTTGTTGCAGAAAAAAATTCAAAAGTTGGATTATGTACAGAAAACATACCCAGGAGAGGCAAGAAATTCAGGACAATAAACATGTTGGGTATGATGTACTTGTCGAAGAAGAAAGTATTCCTACAAATAATTCTCTTAATAATATATTTGACAAACAGTCCATATTGAGAATGGATTCAAATGACATAGTTTTCGAGGATTCTTTCAACATACAGAACACTGATGTTCTAACCAATTCAGTAGTAGAATCGGTACAGAACATGAATGAAGAAGTTGACATTCCAGATTCTACCGCAGTTTTTGATTCAGAACAAAATTCGAATATTCAAACAATATTAATAAACTGCCCAGAATTACAAAATGGGGAGTTATTAAACAATTACATTATGTCACATTTGAAATTGCAGTCAAACAATGCTATCATACTCGATACTACTAATGACAAGAATGAGGAATCTCCAATCATATTCAATATCCAAGCCTTTAATGTTGAAGCTTCGCATGGAGCTGAATGTTCTGGAAATGCGGATGAATATACACAAGAATTTGGTGAAAAATCATTTGACCCAGTTTTAAATGTTGTGGCTGAAAACTCTTCATTGCATGAAAATAGAGACAGCCCTCTTCTGGGATCCCTTGAAAGTTGCATGGAGAATGATATTGGGGATAATTTCTTATCCAATAATATATCACTGTATCCGAGCACACAAATGAATTTCGAAAGTAGATCAGAAATTAATTCAAATACAATCAATGTCAATGAATCTCAGGGTAATGCATTAATTGAAATATTAGAGAAAGCTGACACTAACATTGAGAATAATCTTCATTTACTCAACACTACAAGTGAGGCACTGGAAAATGTTAATTCAAGTATGCTTCACTGTTTAGTTTGTAAAAAGATGTTTGACAGTATGGAACCATATCAAACTCATGTTTGTATGAAATCAAATTTGAAAAAGAATAATGTTTCAACAACTCACAAAAAGTGTAGTAGGAATATAAACATACTGAGAAGAAAAATTCATGTTGAAGATGAAGAGGTGATTGAGAAAAAAAAGAGTCCTACCAAAAAATACCATTGCGTTTATTGTGGTAAGGAATTTGGAAGTAGAGGTTTTTATATGAAACATGTAAACTCAGACCATAAGAACGAAAATGGTCTATATAAATGCAAGTTTTGTGAGAAAGAGTTCAAGAAACCCTCAGATTTAGCGCGTCATTTGCGAACACATACAGGAGAAAAACCATTTGCATGTGATGAGTGTGATAAAAGATTTACATTGAAATCGACACTTGAAGCTCATCAAAGAACACACAATCCAAGTGCTACTAAAAATTTCGTTTGTGAAGTCTGCAATTCATTTTTCAGTTCGAATTCCAGCAAAAAATTGCATATGAATGTGCACACTGGATCAAAACCTCATAAATGTGATTACTGTGAGAAACACTTCAGAACTGCTGCTCATAAAAAATGCCATGAGAAGAAAATACACTTCAGCAACAGAGAAAAAAAGGCGAATCAAAGCAAAGCTAAAAGAATTACCAATATTCTTGCTGCTGCAGTAGAAATGGCTGTGAATGAAATTGCTTGTGATAATCAAGTTTTAGAAGAGCAGGACACTCCTTCATATTCAGAAATAAAGGTCACATTTTCTGATCCTAAATTCCCATCAGAGACTATTAATATTGATTCAGCACTATTACAACAACTTCAAAGCTCAAATATTCTTCTGCAGGATCTTGATCAAGATAACATAGAATGTTCTGAAGGCGCAGATGATTTAGTGACAATGACAGCTGCAGATATAATTAGTAATGAGTGCTTTAAAGAAAGTATCATCTCTAAAAGTCATATCGTTGGTAATTGTTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTGCTCACTGTAGTTTATGTTTTCTTTCGGATGAGGAATTGTTCGAACATGAACAATCCCATTTAGGTTGCGCATCGTATTCCTGTTTTCTCTGTGATAGTAACTTAGTTGGAGATCAACAGCTGAAGGACCATTTGAAAAGCTGTCATCAAATAGAAACTTCTTCCCAGCTGATTCTGTGA
- Protein Sequence
- MEDINSYIVLPLNADESIFIPNLISGYFPNLYVAESCNQKPLTNQELVPPSKGEEEHVNNQNLVLEPVHSNYQFDPYEVSSENTVIKCPKCDASFNDINLYTVHEKTHQDNNKLECKKCYQTFSQVETYKKHLLTHQEDKLFNCVICNAGFNFENNLKVHMALHGKSLVCPICGLSFQRTASLKSHLAIHQVEEFHTCPECASEFDSMDDLKKHIKSHIKQVDVEPPSHELICKYCKVKFSTEKQLNQHIACHLKVKKLVLNGKKPKKEQASQKEHKHKCNVCNKSFLKLSLLERHLRIHKGERPYLCQLCSKGFTQKGTLQIHLLKHSGIKPFCCTLCPAKFHQKGNLKVHVQKTHTAAEEGEKTFKCSECDCIFKKLASLNGHMRKIHSDFGLINITTVIDQLKSLEKQLGGNAAESKENQVIENPSNPVNPTPDDIPKENETNENCKVYSLKQKFDGSNKVYICSYCNKEAKKPSDLIRHIRTHTKEKPFKCQCGSSFALKSTLQSHMKVHKGRKCEKCSKVIASAKVWKAHLRKHEINKNEVKQQDCLDIAVPSDSPINRHTIISDKPLKCQLCSSSFSKKENLSQHMRLHTDEKASKCPVCERLFTSSHTLKQHMQSHSDFNCHLCDKKFKNESLLEQHVSTIHDDSKLYDCPCCRKKFKSWIMYRKHTQERQEIQDNKHVGYDVLVEEESIPTNNSLNNIFDKQSILRMDSNDIVFEDSFNIQNTDVLTNSVVESVQNMNEEVDIPDSTAVFDSEQNSNIQTILINCPELQNGELLNNYIMSHLKLQSNNAIILDTTNDKNEESPIIFNIQAFNVEASHGAECSGNADEYTQEFGEKSFDPVLNVVAENSSLHENRDSPLLGSLESCMENDIGDNFLSNNISLYPSTQMNFESRSEINSNTINVNESQGNALIEILEKADTNIENNLHLLNTTSEALENVNSSMLHCLVCKKMFDSMEPYQTHVCMKSNLKKNNVSTTHKKCSRNINILRRKIHVEDEEVIEKKKSPTKKYHCVYCGKEFGSRGFYMKHVNSDHKNENGLYKCKFCEKEFKKPSDLARHLRTHTGEKPFACDECDKRFTLKSTLEAHQRTHNPSATKNFVCEVCNSFFSSNSSKKLHMNVHTGSKPHKCDYCEKHFRTAAHKKCHEKKIHFSNREKKANQSKAKRITNILAAAVEMAVNEIACDNQVLEEQDTPSYSEIKVTFSDPKFPSETINIDSALLQQLQSSNILLQDLDQDNIECSEGADDLVTMTAADIISNECFKESIISKSHIVGNCLSXXXXXXXXXXXXXXXXXXXXXXXCAHCSLCFLSDEELFEHEQSHLGCASYSCFLCDSNLVGDQQLKDHLKSCHQIETSSQLIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -