Basic Information

Insect: Coccinella septempunctata
Gene Symbol: -
Assembly: GCA_907165205.1
Location: OU015573.1:65965126-65968557[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.005 0.84 11.4 5.5 1 23 32 54 32 54 0.99

2 19 2.2e-06 0.00037 22.0 1.6 1 23 60 82 60 82 0.98

3 19 8.2e-05 0.014 17.0 0.4 1 23 88 110 88 110 0.98

4 19 0.0042 0.71 11.7 0.4 2 23 117 139 117 139 0.94

5 19 3.7e-05 0.0062 18.1 1.1 1 23 144 166 144 166 0.98

6 19 0.016 2.6 9.9 7.7 1 23 176 199 176 199 0.96

7 19 0.00033 0.056 15.1 0.3 1 23 206 228 206 228 0.97

8 19 6.4e-07 0.00011 23.7 0.5 2 23 235 256 234 256 0.97

9 19 2.1e-07 3.5e-05 25.2 1.1 1 21 262 282 262 283 0.97

10 19 0.0072 1.2 10.9 5.6 1 23 305 327 305 327 0.98

11 19 1.8e-05 0.003 19.1 1.9 1 23 333 355 333 355 0.98

12 19 9.4e-05 0.016 16.8 0.5 1 23 361 383 361 383 0.99

13 19 0.0011 0.18 13.5 0.2 2 23 390 412 390 412 0.92

14 19 0.00038 0.065 14.9 1.6 1 23 417 439 417 439 0.97

15 19 0.036 6.1 8.7 7.9 1 23 449 472 449 472 0.96

16 19 2.2e-05 0.0036 18.9 0.5 1 23 479 501 479 501 0.98

17 19 5.3e-06 0.00089 20.8 0.5 2 23 508 529 507 529 0.97

18 19 1.5e-08 2.5e-06 28.8 4.2 1 23 535 557 535 557 0.99

19 19 1.3e-05 0.0021 19.6 0.3 1 23 563 585 563 585 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.005	0.84	11.4	5.5	1	23	32	54	32	54	0.99
2	19	2.2e-06	0.00037	22.0	1.6	1	23	60	82	60	82	0.98
3	19	8.2e-05	0.014	17.0	0.4	1	23	88	110	88	110	0.98
4	19	0.0042	0.71	11.7	0.4	2	23	117	139	117	139	0.94
5	19	3.7e-05	0.0062	18.1	1.1	1	23	144	166	144	166	0.98
6	19	0.016	2.6	9.9	7.7	1	23	176	199	176	199	0.96
7	19	0.00033	0.056	15.1	0.3	1	23	206	228	206	228	0.97
8	19	6.4e-07	0.00011	23.7	0.5	2	23	235	256	234	256	0.97
9	19	2.1e-07	3.5e-05	25.2	1.1	1	21	262	282	262	283	0.97
10	19	0.0072	1.2	10.9	5.6	1	23	305	327	305	327	0.98
11	19	1.8e-05	0.003	19.1	1.9	1	23	333	355	333	355	0.98
12	19	9.4e-05	0.016	16.8	0.5	1	23	361	383	361	383	0.99
13	19	0.0011	0.18	13.5	0.2	2	23	390	412	390	412	0.92
14	19	0.00038	0.065	14.9	1.6	1	23	417	439	417	439	0.97
15	19	0.036	6.1	8.7	7.9	1	23	449	472	449	472	0.96
16	19	2.2e-05	0.0036	18.9	0.5	1	23	479	501	479	501	0.98
17	19	5.3e-06	0.00089	20.8	0.5	2	23	508	529	507	529	0.97
18	19	1.5e-08	2.5e-06	28.8	4.2	1	23	535	557	535	557	0.99
19	19	1.3e-05	0.0021	19.6	0.3	1	23	563	585	563	585	0.99

Sequence Information

Coding Sequence: ATGGCTAAGAGCAGTCTTCTCTCTTTGGAAAAGGACGAGAAACCAATCATTGAATGCGAAGTAAAGATCGAAGAAGATCAAAGTGAGTTTCCCTTTCGCTGTTCGCAGTGTTTCAAGGGTTTCCACAAAAAGATCCGGTTGAAGAGTCACATGTTGACCCACAGTCAAGAGCGTCCATTCGAATGTTCAGTATGCCAAAAAAAATTCAAAAATAAATACCAGCTCATCGTTCACAACCGAATTCACACGAAGACCAACACTTTCGAATGCGAGATCTGCCTGAAGATACTGAAATCGCAAGGTTCTCTCACAACCCATGTAAGGCGACACCTGAAGGAATACGTGGCAACTTGTGAGTATTGCAGTGCTGGGTTTGTCACAAAACAGGAGTACCAATATCATATGGGTTCCAAACACGGTCAAAGTTTATACGTTTGTGATATTTGCAATAGGTCTTGCTACGACAAAGCCGCTTTGCAGAGTCATCGAGCGAGACACGAAGAAGGCTACGAAACCAATCCGAAACATAAGTGCAAGTTGTGCGACAAGTCGTTTTTGCAGGAAAAATCCCTCAAACACCACCATTTGAGGATTCACAGTGACGGCGGTCAGAAGTACATATGCGATAGTTGTGGAAAGAGACTTAGTTCCATGACGAGCCTAAGAGATCATCAGTTGATCCATAAAGGTTTGAAACCACTGCAATGTCCAGAATGCGACAAAAGTTTCGCCTTGAAAACAACTTTAAACATGCACCTAAGGACGCATTCGGGAGAAAGACCTTATAAATGTCAAGATTGTGGCAAAGCGTTCACCCAGCGAAGTTCCTTCAAGACTCATTTGAGGGAGACGGACGAAAAACCATCCATTAAATGCGAAGTAAAGATCGAAGAAGGTCAAAGCGACTTTCCCTTTCACTGTCCCCAGTGTTCCAAGGGCTTTCACAAAAAGATCCGACTGAAAAATCACCTGTTGACACACAGCGAAGAGCGCCCGTTCGAATGCACAGTATGCCAAAAGAAATTCAAAAGAAAATACGAGGTCACCGTGCACAACAGAATCCACATGAACACCAATACCTTCCAGTGCGAGATCTGCTTGAAAATACTGAAATCTCAAGGCTCGCTCAGCACCCACATAAAACGGCACCTGAAAGAGTACGTGGCTACTTGCGAGTATTGCGGGGCTGGGTTCGTCACCAAACAGGAGTACCAGAATCATGTGGGCTCCAAACATGGTCGAAGTTTGCACGTTTGCGACATTTGCAATAGGCCTTGCTACGACAAAGCCGCTCTGCAGAGTCATCGCGCCAGGCACGAAGAAGGCTACGAAACCAATCCCAAACACAAGTGCGAATTATGTAACAAGACGTTTCTGCAAGAGAAATACCTGAAGCACCATCACATGAGGATCCACAAAAACGGCGGACAGAAGTACATATGCGACAATTGCGGTAAAAGGGTAAATTCGAAGAGGAGTCTGAGAGATCATCAGTTGATCCATAAGGGTCTGAAACCAGTGGAATGTCCGCAATGCGACAAGAAGTTTGCCTTGAAAACAACGTTGAACTTACACCTAAGGACGCATTCGGGAGAGAGACCTTACAAATGTCAAGATTGTGGCAAATCGTTCACCCAAAGGAGCTCTTTCAAAACCCATATGAGGTACCATACTGGGGAACGGCCATACCAGTGCGACTTTTGCGATCAAGCTTTTGTCAGTAGAGGCGCGATGACTTTGCATATTAGGAGACATTGA
Protein Sequence: MAKSSLLSLEKDEKPIIECEVKIEEDQSEFPFRCSQCFKGFHKKIRLKSHMLTHSQERPFECSVCQKKFKNKYQLIVHNRIHTKTNTFECEICLKILKSQGSLTTHVRRHLKEYVATCEYCSAGFVTKQEYQYHMGSKHGQSLYVCDICNRSCYDKAALQSHRARHEEGYETNPKHKCKLCDKSFLQEKSLKHHHLRIHSDGGQKYICDSCGKRLSSMTSLRDHQLIHKGLKPLQCPECDKSFALKTTLNMHLRTHSGERPYKCQDCGKAFTQRSSFKTHLRETDEKPSIKCEVKIEEGQSDFPFHCPQCSKGFHKKIRLKNHLLTHSEERPFECTVCQKKFKRKYEVTVHNRIHMNTNTFQCEICLKILKSQGSLSTHIKRHLKEYVATCEYCGAGFVTKQEYQNHVGSKHGRSLHVCDICNRPCYDKAALQSHRARHEEGYETNPKHKCELCNKTFLQEKYLKHHHMRIHKNGGQKYICDNCGKRVNSKRSLRDHQLIHKGLKPVECPQCDKKFALKTTLNLHLRTHSGERPYKCQDCGKSFTQRSSFKTHMRYHTGERPYQCDFCDQAFVSRGAMTLHIRRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -