Csep011003.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- Smarcc2
- Assembly
- GCA_907165205.1
- Location
- OU015574.1:51428945-51431610[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-16 2e-12 48.2 0.1 3 44 297 338 295 340 0.95
Sequence Information
- Coding Sequence
- ATGTCTAAATCTGCAACCAAGCCTACTAAGCGAAAAAATCCCAAGTCGTCCTCAACTCCTAACCCAAAGAGATTTAAACCAACAGTTGAACAAAATGAATCCATTCCTGATATGGAAACATTACTGTCAGATTTGCCAAAGGAAGAAGGGAATATTTCTGAGAAACAAGCAGAAATCCTAAATGAAAAACATGAAGGTTCTCCAGAAGAGATAGTGAATGATGTCAAAAGTGAAGTTGTAGAAAAGGAACATGAAAATGAGAAGTCTCAGGAAAATGAAAAAGAAAAGGGAAAATCGTCTCCAAAATTGGACGATGGACCTTTTTTCGATGATGATGATAAAGTGATAGAGCAAACACATCATATCATCATTCCTTCATATTCAGCATGGTTTGATTATGATTCTATAAATGAAGTGGAAAAGAGGAGTCTACCAGAATTCTTCAACAGTCGGAATAAATCTAAAACACCGGAAGTCTATCTAGCATATAGGAATTTTATGATTGATACTTATCGCCTCAATCCAACTGAATACCTCACTAGTACAGCTTGTAGAAGAACTCTAGCCGGAGATGTTTGTGCAATAATGAGAATACATGCTTTTCTTGAGCAATGGGGGTTAATCAATTACCAATTGGAATCTAACAGTAAACCTGCTGAGATGGGTCCCCCACCAACATCACATTTCCATGTATTATCTGAAAGTGCAGCTGGATTACAAAATATTGGTACTCCAAAATTGGCTAATAATGACTCGAAAAAAATCATGCTTGATTTAGATGATCATTGCCCTGAAAAAAACTCAATGATAGGCCAGCTGGGATTGAAGTTAGATCAATATGCTGGTAAAGCTAAGAAACAAAGCAAAGCAGCACGAGAAGCTATGAGGTGTTGGACAGAGCAGGAAACCTTGCTTCTTTTGGAAGCAATAGAAATGTTCAAGGATGATTGGAATAAGGTTGCAGAACATGTTGGTTCTAGGACTCAAGATGAGTGTATATTGCATTTTTTGAGGCTTCCTATTGAAGATTCGTTTCTGGATAAATTACCCAATGGTCCTCTAAATTTTCAGCCGATTCCATTCAGTAAGTCTGGTAACCCAGTTTTGTCCATCATAGCATTTTTAGCTTCCATTGTTGATCCTAAAGTAGTGACTGTTGCAACTGAAAGTGCCATGAAATTGTATACCAAGATGAAGGACGAAGAAATTCCACACCAAATAGTAGAGGACCATTTAAACAGAATAAGGGAGTCTAAAATCGAAGGAAAGTTTGATCCGAAGTTCCGTTTGGAAGAAACAGGAATTTATGGGACTGGGTCAAATGAAAGTGTTGACGTTGATGAGATTGGGGAAAAAGAAGATACTCCTATCATTAAAGTGGAAGGAGATACCCAGAAAGATATTGAGAAAGCAGCAGTTCAGGCTCTAGTAGCAGCTGCTCTTAAAGCAAAAAAACTGGCCGATGTGGAGGAACAAAAAATGAAAGGGCTCATTCAGCTTTTAATTGAAACGCAGATGAAAAAGTTTGAGTTGAAGTTGCAACAATTCAAAGAACTGGAATTGATGCTTGTTAAGGAAAAAGAAACTTTGGAATATCAGAAGCAGCAGCTAATCACTGAGCGGCAAAGTTTTCACTTGGAACAGCTTGAAGTAGCAGAACAGAGAGTCAAACAACAAGCTCAATTGAAAGTTCACCAAGGAAGTGAATAA
- Protein Sequence
- MSKSATKPTKRKNPKSSSTPNPKRFKPTVEQNESIPDMETLLSDLPKEEGNISEKQAEILNEKHEGSPEEIVNDVKSEVVEKEHENEKSQENEKEKGKSSPKLDDGPFFDDDDKVIEQTHHIIIPSYSAWFDYDSINEVEKRSLPEFFNSRNKSKTPEVYLAYRNFMIDTYRLNPTEYLTSTACRRTLAGDVCAIMRIHAFLEQWGLINYQLESNSKPAEMGPPPTSHFHVLSESAAGLQNIGTPKLANNDSKKIMLDLDDHCPEKNSMIGQLGLKLDQYAGKAKKQSKAAREAMRCWTEQETLLLLEAIEMFKDDWNKVAEHVGSRTQDECILHFLRLPIEDSFLDKLPNGPLNFQPIPFSKSGNPVLSIIAFLASIVDPKVVTVATESAMKLYTKMKDEEIPHQIVEDHLNRIRESKIEGKFDPKFRLEETGIYGTGSNESVDVDEIGEKEDTPIIKVEGDTQKDIEKAAVQALVAAALKAKKLADVEEQKMKGLIQLLIETQMKKFELKLQQFKELELMLVKEKETLEYQKQQLITERQSFHLEQLEVAEQRVKQQAQLKVHQGSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00965101; iTF_00020177; iTF_00764675;
- 90% Identity
- -
- 80% Identity
- -