Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_907165205.1
Location
OU015573.1:7481521-7486567[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.5 5.1e+03 -1.1 0.0 3 18 191 206 189 225 0.81
2 6 0.16 3.4e+02 2.7 0.1 22 45 271 296 267 297 0.82
3 6 5.6e-07 0.0011 20.2 0.0 1 35 303 339 303 349 0.92
4 6 7.9e-10 1.6e-06 29.3 0.0 1 46 356 405 356 405 0.95
5 6 1.2e-05 0.025 15.9 0.0 3 46 414 457 412 457 0.96
6 6 0.02 41 5.6 0.1 1 44 463 505 463 507 0.82

Sequence Information

Coding Sequence
ATGGAATTTGATGATGATGATGATGAAAGTGGTAGAACCTTTACTACCTTGACCAACTACTATAACGAACCTATGAATGATTCCAAATTGCACTTTGAGAAGTTCCTCTTTGCTGGAGACAGTGATAGTGAAGTAGAACATGAGGAAAATTTCACATACTCTGATGATTCCAATGGTTTTGAGGAAGAAGTCCAAGATATAGAAGATCCTCTGAATGTTTTATCAGATGCCTCTCAACATTTTTCACAGGGATCTGAAGATTGGAGGAACTCAGATTCGCAATGTTTAACCTTAACTGAGCTAATGAGAATGAATCGCAATGAAAAATTCCAGTTGTTACAATTATTTCATAAAATTAAAGACTTTCTTATTGACATTCAGAATAGAATGAAAATATTGAAAACATCATCACAAAAAATTAGAACCAAAGAGAGTATCATGTTTTTAGGACATGTGGGTGCTCCGTATTTTAAAACTAAGAAAGATATGTTTTGTAGTGATCCCAATCCTGATACATTAGATCGCAGGAAAAGGGGATTACTCACAATTTATCAACATGGATTTCCATCGAGATGGTCTAAAACAGAATGTGATAACCTCACTAGAGGTGTGAAATTAACTTATAATCTCAACAAGCAGAGAGCTATATTGAAGGACATAGGATATTTAAGAAGGAAAATTGTAGAGGAGACAGACTCGGCAATTATATTGCAGAAAGAATATGAAATTGAAAAAAAGGAAGGTGAAATCAGGAATCTCAAAGCAATAGGAATTGAAGATGTGCCTCCATTGTGCGAAGATAAATTTATAGATTGGGAACATATTTCAACAGAATACTTAATGGAGAAACATACTGCCAAGGAGTGTTCTATTTTCTGGCGTATATATTTACATCCCGACTTGAACAAGTCCAACTGGTCAACTAGGGAAAATAAGGTCATCAGGGAATTGGCGGAAAAATATAATTATCAAGATTGGGATCGAATTGCACAAGAGCTTGGTACTAATCGTAGTGCTTTCACGATTTTTATCCATTATTCAAGTACTTTATGCCATCAGCCAATCAAAATGCGTTTCTCAGAAGAAGAAGATCGAGCACTTTTGCAACATATTGAAAGCAAGAAAACTGGGGCCATTATTCCATGGAATACCATTGCAGAATTCTTTCCGAATCGATCTAAAATCCAACTAATTCATAGGTATAAATATTACTTGCGCAATATGTCTCAGTATACCACCGAATTTTCAGATGCTGAAGACATTTTGATTCTTCTCCTGGTAGAACGTTTTGGTCGAAATTACGTTCAGTTTCCAAAATATCTACCTTCGAAATCATACATGCAGATAAAAGCTAGATATGATAATCACTTGAGGTTCAACAGAGTGAAAGGATCCTTTACTTTAGAAGAAGATAGGCAAATAATGGATCACTTCAGTAATAAAAAATTCGAAATTACTCATCTCTCTGCTCATATGAACCGAAATAGACTCCAGTTAAGACAGAGGTATAAAAAACTAACAGAGTTCTTCAATAAACATCCAGATAAATCCTTGGAAGATGTGCGTAGAAGATTTGGCAAGAAAAATGAAACTTTCCGAAAGTTAGAATTTTTGAAATATGTAGTAGATCAATTCAAAGATCAAGTTGATATTCCCTCCCTCAGTGACATTGAGAGTAAATTGGGAAAGAAGAAATCTAAAAAGAATCAGAATTTCGATAACTTACTCGTTACTTTTTTTAGTTCTTCATACACAATAAAACAGAAATCTTTTGAAACCTCTCTTTCCAAAATTCAAAAAACTGCAGAACAAATTCATAGTATAACTAAAATATTGGGGATCAACCTTCGAATTCCTGCCGAAATAAAGAAAAATAATACATTAGATATAGTTGATATAGAAATATTGAATTTATTGAGAGAAAAGGAATATACACATATGCCTAGACCCTCAATTAATGAATTTCTTCCTCCTAACATAAATTCTCTGATTGGTTTGAGAGGTTTGTTACTGAAAAATCAATCATATAAGAGAATGAAAAATAAAGAAACAGTAATTTACAGAGGTCCAGCATTGATGAATTTGCAGAAACATAATTTAACTTCTGAACTTGATGATTTTCTAAAAAGTAAGGACAGTAATACTCAAAGTATGATACTTTTTGAAAGAAATCTTTTTTTGAAAAGATTCATATCTATGTTTATGTGGCCAGCATTACTCTCAATTGAGTCTCCAAGCTCATGTTTATTGGAAAAGGAATTTGGGCTCAATAATTCAAATCATTCGAAAGAGACAAACAAAAAAAATAACACAAGTGAAAATAAATTATTGAAAAGAAAACTTGATGGGAATATTGATATACCATTACCAAAAAAGACTTCAAGGACTTCACCTGATGATAGTGATAAAAGTAAATGCAACCATGATTCTACGCAACCAATAAGATCAAGTTCCCGACTGAGAGATAAGAAGAGAATATCAGAGAAAATAAGTTTGCAGGCGAAAATAACTGAAGAAGATATCGAAACTAGTAAACTTTCTGGACAACAATCAAACTCTTGTAAAGAAGTTGAGGAATCTATAAATGTCCGAAGTAACGCAAATTCCAAGGATAAGTTATGTGAATCTAATAAAAATAAACAAGTCATTCTTTCTAATCTAGTTAGAGTTGACAAAAATGAAGTAATGAAGTTATTGCAGAATAAGAAACCTATCAAAATAATCAAAATTCAGTGCATAAAAGAACAAGATGGTTCTTTGCCTACTCGATCACAACCTTCCCATTCAAAAACAGATAATGAATCGAAAAATATTCAAAATCTAAAAAATGTAGAAGCTTCAAGTTCAATTACTTCTGCTGATAATACAAAGAATAATGATAATACAAACTCTCTAACTATCAGCCAAAATTCAAATTCTCCTGGTAATAGGTTATTGAATTTGTATGAAATGAAGAACACATTGAACAATTCCTTTAAAAATGGTATAAGGGGTAAACCCACTTCGAAAATTAGTAATAATGATGATGCAGAGGATATCCTTAAGCTTGATGATTTACTGAATAATGTTGAGGATGAAGATAGTATAATTGATTTGACTGAAACAGAAGTTATGAAAAATGAAGTAGAACAACTGGATCAACTCATAAAACAAGAAAAATCCTTAAGTTTATTTTGA
Protein Sequence
MEFDDDDDESGRTFTTLTNYYNEPMNDSKLHFEKFLFAGDSDSEVEHEENFTYSDDSNGFEEEVQDIEDPLNVLSDASQHFSQGSEDWRNSDSQCLTLTELMRMNRNEKFQLLQLFHKIKDFLIDIQNRMKILKTSSQKIRTKESIMFLGHVGAPYFKTKKDMFCSDPNPDTLDRRKRGLLTIYQHGFPSRWSKTECDNLTRGVKLTYNLNKQRAILKDIGYLRRKIVEETDSAIILQKEYEIEKKEGEIRNLKAIGIEDVPPLCEDKFIDWEHISTEYLMEKHTAKECSIFWRIYLHPDLNKSNWSTRENKVIRELAEKYNYQDWDRIAQELGTNRSAFTIFIHYSSTLCHQPIKMRFSEEEDRALLQHIESKKTGAIIPWNTIAEFFPNRSKIQLIHRYKYYLRNMSQYTTEFSDAEDILILLLVERFGRNYVQFPKYLPSKSYMQIKARYDNHLRFNRVKGSFTLEEDRQIMDHFSNKKFEITHLSAHMNRNRLQLRQRYKKLTEFFNKHPDKSLEDVRRRFGKKNETFRKLEFLKYVVDQFKDQVDIPSLSDIESKLGKKKSKKNQNFDNLLVTFFSSSYTIKQKSFETSLSKIQKTAEQIHSITKILGINLRIPAEIKKNNTLDIVDIEILNLLREKEYTHMPRPSINEFLPPNINSLIGLRGLLLKNQSYKRMKNKETVIYRGPALMNLQKHNLTSELDDFLKSKDSNTQSMILFERNLFLKRFISMFMWPALLSIESPSSCLLEKEFGLNNSNHSKETNKKNNTSENKLLKRKLDGNIDIPLPKKTSRTSPDDSDKSKCNHDSTQPIRSSSRLRDKKRISEKISLQAKITEEDIETSKLSGQQSNSCKEVEESINVRSNANSKDKLCESNKNKQVILSNLVRVDKNEVMKLLQNKKPIKIIKIQCIKEQDGSLPTRSQPSHSKTDNESKNIQNLKNVEASSSITSADNTKNNDNTNSLTISQNSNSPGNRLLNLYEMKNTLNNSFKNGIRGKPTSKISNNDDAEDILKLDDLLNNVEDEDSIIDLTETEVMKNEVEQLDQLIKQEKSLSLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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