Csep016603.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- clz9_7
- Assembly
- GCA_907165205.1
- Location
- OU015581.1:14611753-14613027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-08 7.1e-05 23.7 0.1 2 38 16 53 15 58 0.92 2 2 1.8 1.5e+03 0.2 0.0 23 29 309 315 309 316 0.94
Sequence Information
- Coding Sequence
- ATGGTCCGAAATTATGAAAGAAAAACTAATAGAGGAAAGTGGAGTGAAGCACAAATGAAATTAGCCATTCAAGAAGTTTTGGATGGAAAAAAGGGTTACAAATCGGCCAGTAAGGCTTATAATGTTCCTCAAACAACACTCGAGCGTAAAGTTAACCAAGCAAGAAAAAGAGAAAATAGTGTACAGAATGTCAAGGTTCCCTTAGGTCCAATTACAACAGTGTTTTCTGAAGAAGCAGAACAAATACGTGTTGACTATTTGAAGGAAATGGAAGGAAGATTGTTTGGTTTGTCAACATCCGAATTCCAGAAGTTAGCCTATGAGTTAGCAGTTCGTAACAGACAACACAAATTTAATGAACTCAAGGAAAAAGCTGGTAAGGACTGGCTGCGTGGATTTCTAAACCGTCATCCTCATTTGAGTTTACGAAAGCCTGAAAATACTTCAGCGGCTCGTGCTGCTGGATTTAATAGTGTCGAAACATTTTTCGAACGGCTAGGAAAAACACTTGACGAAAACCGTTTTACTCCAGACAGGATATATAACTGTGACGAGACAGGTGTTTGGGTGGTGCCAAAATCACGGTCCAAAGTGATCGCAGCGACGGGTAAAAAGCAAGTAGGTGCTCTGACATCGGCCGAACGAGGCACGACTATAACGATTGAAATTTGTTTCAACGCTGCAGGGTCATACCTTCCTCCAATGTTCATATATCCCAGAAAACGTATGAAGCCCGAACTTCTCAATGGAGCTCCACCGAACTCATGGGCTGAATGTTCAGATTCTGGGTGGATTACTGCAGAAATTTTCTTGAAATGCTTTCAGAAGTTTGTAATACTCACCAACGCTTCTAAAACCAACCCAGTTATGCTGATTTTAGATGGCCGCGCTACTCATACCCAAAATCTGCAGTTAATCGATGAAGCACGTAAATACGGTGTGCCGATAATATGCTTCCCACCACACACCACTCACAAACTACAGCCCGCAGATGTTGGTTTTATGTGGTCTTTGAGTATATTTTATGATCAGGCTCTAACAGCATGGTTAAGATCTAATCCTGGGAAAGTAGTTTCGCAATTTCAAGTGGCTGACTTCTTCGGGCAAGCGTTTATCCGGGCAGCAACAATGCTAACTGCAATTAATGCATTCAAAGCATGTGGGATCTCGCCTTACAATCCACATATTTTTACCGAAGATGATTTCATTGCTGCAGAGGCTACCGAAATCGAATTGAACGCTGAAAAGGAACCCGAAGCTGATACAACTCACTGA
- Protein Sequence
- MVRNYERKTNRGKWSEAQMKLAIQEVLDGKKGYKSASKAYNVPQTTLERKVNQARKRENSVQNVKVPLGPITTVFSEEAEQIRVDYLKEMEGRLFGLSTSEFQKLAYELAVRNRQHKFNELKEKAGKDWLRGFLNRHPHLSLRKPENTSAARAAGFNSVETFFERLGKTLDENRFTPDRIYNCDETGVWVVPKSRSKVIAATGKKQVGALTSAERGTTITIEICFNAAGSYLPPMFIYPRKRMKPELLNGAPPNSWAECSDSGWITAEIFLKCFQKFVILTNASKTNPVMLILDGRATHTQNLQLIDEARKYGVPIICFPPHTTHKLQPADVGFMWSLSIFYDQALTAWLRSNPGKVVSQFQVADFFGQAFIRAATMLTAINAFKACGISPYNPHIFTEDDFIAAEATEIELNAEKEPEADTTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121534;
- 90% Identity
- -
- 80% Identity
- -