Csep003884.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- bab1
- Assembly
- GCA_907165205.1
- Location
- OU015573.1:1222486-1559804[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-17 6.1e-14 52.7 0.0 1 43 316 359 316 361 0.95 2 2 3.9 3.2e+03 -0.9 0.6 6 15 458 467 453 471 0.80
Sequence Information
- Coding Sequence
- ATGCAGCACACGGCGGGATCGCCTCAGCAGTTCTGTCTGCGATGGAACAATTACCAGTCGAATCTGACGAACGTTTTCGATCAGCTGCTACAGAGTGAGTCGTTTGTCGATGTGACGCTGGCTTGCGATGGGCACTCGATGAAGTGTCACAAGATGGTCCTGTCTGCGTGCAGCCCGTACTTTCAATCGTTGTTCTTCGAGAATCCGTGTCAGCACCCCATCGTGATCATGAGGGACATCAAGTGGCCGGAGCTCAAGGCGGCCGTGGAGTTTATGTACAAGGGCGAGATAAACGTGTCGCAGGAACAGATAGGTCCTCTGCTCCGCGTGGCCGAGTCCCTGAAGATCAGGGGTCTGGCCGATGTGAACGGCGAGCAAGACACCGTGACAACGGCCGCCGGCGAGATAACCACCAAGCCGTCCCCGATCAAACAGCTGTCTACCACGACTCCCGTGCCGATGACCCCGAATTCCAACAGCGCGATGGAATGGGAGTCCGGGAACGGTCATCCCGCCAAGAAGAGACGCCGTTCCGGGGAGAGGAGCAGCATCAGCAGTCCTGGCGAGAGCGCGGCCAGCACGACCGCGGACGTCCCCGAGCCCCCGCTGTCGGTGGAGATGTCCCCGGCGCCTTCATCGACCCCCTTGCCCCCTTCTAGCTCGGCCGAACCGATGCCGCTGAATTTGCCCTTGCCGTCGCACGTGGCGCACATGCCTCCCTCTGACGATATGGAGATCAAACCTGGTATTGCTGAGATGATACGCGAGGAAGAACGGGCTAAGCTTTTGGAATCTTCCCATGCTTGGCTCGGCGCTTCCACATCATCAATAGCCGCAGATAGCTACCAGTACCAATTGCAATCCATGTGGCAAAAGTGCTGGAACACAAATCAGAGTCTTGTTCATCACTTACGCTTCAGGGAAAGGGGACCTTTGAAATCCTGGAGACCAGAAACGATGGCCGAGGCAATTTTCTCCGTGTTGAAGGAAGGTTTATCGCTCTCGCAGGCCGCTAGAAAATACGACATTCCCTATCCTACTTTTGTGCTTTACGCTAATCGAGTTCACAACATGTTGGGACCCTCTGCAGATGGTGGATCAGATCTCAGGCCCAAGGGTCGTGGCCGACCTCAGCGCATCCTCCTCGGGATCTGGCCGGATGAGCACATAAGAGGTGTTATAAGAGCAGTTGTTTTCAGAGACTCCCACCATATCAAAGAAGAACAACAAATTCATTATCCCAGAATTCATGATTCGGTAAGCAGTGTCAACACATCCGGAGTGAACACTGGTACCACAGCTAATATCCAAAACTTCCCAAACACAACCTGCAACGATGCTTCGGATCCGAACGTATCCCCAGCTGCGGCCGCAGCAGCCGTTGCCGCAGTAGCGCAAGGTTTACGACAGCAGATGTGCAGCATGGTAGCGGCGGCTAATCAAAGTTCTGCCCACGAAACAAACCCCGTAGCGAGTCTGGTGAACTCTCTCGCATTCGGCAACGCTTGCGGCAACATGCAAAATAACGGTTCGCTTCCAATGGGTATGATGCCCAATATGAGCCACATAACCTCTCTGCGTAGTATAAGCAGCCCCGCCGGTTGCATACAAGACCTTAGGATAAGCCCGTCGGAATCGGCACTAGAAAGTCCCATCTCTTCCCCGCTCGGCCTAACAGTTCCCAGTTCCATGGAGCAGACCATGAACTTATCTCTGTCCCACAATATGAACACTACCAGTGCGACGGGTATGACGTACAAATCCTCGCGGCCGTACTCGTCTCCGAGACCTGAAAATCTCTTCCAAGAAGATATTAACGATCTGGTGAAACCGATCAATTCTTCCACCCCCAACACGAGAGAGTCCATGCCTATCAAACTGGAACCGATGACGGACTGTCGAGGCGAATGA
- Protein Sequence
- MQHTAGSPQQFCLRWNNYQSNLTNVFDQLLQSESFVDVTLACDGHSMKCHKMVLSACSPYFQSLFFENPCQHPIVIMRDIKWPELKAAVEFMYKGEINVSQEQIGPLLRVAESLKIRGLADVNGEQDTVTTAAGEITTKPSPIKQLSTTTPVPMTPNSNSAMEWESGNGHPAKKRRRSGERSSISSPGESAASTTADVPEPPLSVEMSPAPSSTPLPPSSSAEPMPLNLPLPSHVAHMPPSDDMEIKPGIAEMIREEERAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDSHHIKEEQQIHYPRIHDSVSSVNTSGVNTGTTANIQNFPNTTCNDASDPNVSPAAAAAAVAAVAQGLRQQMCSMVAAANQSSAHETNPVASLVNSLAFGNACGNMQNNGSLPMGMMPNMSHITSLRSISSPAGCIQDLRISPSESALESPISSPLGLTVPSSMEQTMNLSLSHNMNTTSATGMTYKSSRPYSSPRPENLFQEDINDLVKPINSSTPNTRESMPIKLEPMTDCRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00349367;
- 90% Identity
- iTF_00349367;
- 80% Identity
- iTF_00349367;