Cfuc002035.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- grn
- Assembly
- GCA_001014335.1
- Location
- JXOR01000078.1:549677-600032[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.16 3.7e+02 0.2 0.1 6 17 6 17 5 19 0.88 2 3 1.2e-19 2.7e-16 58.3 4.7 1 35 280 313 280 314 0.98 3 3 5.7e-19 1.3e-15 56.1 6.8 1 35 337 370 337 371 0.97
Sequence Information
- Coding Sequence
- atgGATATGTCTTCATCAACTGAAACGGCACGTTGGTATGATAATCCACGTCTTGGTGGGTCACCAAGTATGGGCCATCAAAATGCATCGGGTAGTGTGGATGCATCCGATATGGGTGCTTTATATGCATTAGAAAATAGTGGACATAGACGATACTATTCTGGATATGCACCTCATACATCAAGAATGCCTTCATCGCATGGTTCACCGCAAGTATGTAGACCACATTTTCCTGCACCATTACATCCTTGGCTGACGGAACCAAAATCATTACCATCCGGTACATGGGGTAATCCGTTTGCATGTCCACAGGAGCCACAGGATAAAGTAAGCCAGGTGCAATCACATCAATCTGGTCAacatatattttcattccCGCCAACACCACCAAAAGATTCAACACCTGATTCAGTACAAACGGGACCAACCGAATACCAGGCAGCCGTAAATGCATTTATGCATCAAGCACAACAACAAACGTCTTCAACTACCTCAGGCTCAGCATCAGAGAATTGTGTATTGGACGTAAAACCAtcaatacaacaaaataatagtGGTCAATCGGCACCAAAACAACGTGAAGGTACAACCAGCAGTAATAATCATtctagtaataataataataatacgaCACAATTAAACGGTGGTTTATTTGAAACACCGCAAAGTTCATATGAAGGATATGAAAATAGTTATGGTGGTTATCACCAGAATGGTGGTACTGGTGGAAgtggcggtggtggtggtgtATTTCAAACAAGTGCCAGGACCAATATGAGTCCACATCATTCAAAACCGCAGAGGACTAAACAAAGAACTAGCGCCGAGGGTAGAGAGTGTGTTAATTGTGGAGCAACATCAACACCTCTATGGCGACGAGATGGTACCGGTCATTATTTGTGCAACGCATGTGGGCTTTACTACAAGATGAATGGACAAAATCGACCCCTAATAAAGCCCAAACGTAGACTGTCGTTACAAAGTGCAGCCCGTCGTGCTGGTACATCATGTGCAAATTGTAAAACCACAACGACAACCCTTTGGCGACGTAATCAAAGTGGTGAACCCGTTTGTAATGCCTGTGGTCTCTATTATAAACTACATAATGTAAATCGACCGTTGACAATGAAAAAAGAAGGAATCCAAActagaaatagaaaattatcatcaaaatcaaagaaaaagaaaggtATGGGTGGTGGTTGCTTACCAATGGGTGGACATTTAGGTGTTGGTATGAGTGACCTGATGAAACCATTGGATCCATCAAAAACATTTGGTGGTGGATTCTCCTCAATGGGCCAACATGGTCATTTATCTGGTGGCCTCCATCCAGCTCATATGCATAGCGGATGGTATACAAGCAGTATGAGTGCATTAGGTGCATCTGGTGGACTTCAAGGTGGTTTCTCAACAACCGGTGGCTTAGGTGGTGGCGTTGTACCACATTCACAATCATATCACTTAGGACTTGGTTCAATGgGCACATGGCGACCAGATTATACGTGA
- Protein Sequence
- MDMSSSTETARWYDNPRLGGSPSMGHQNASGSVDASDMGALYALENSGHRRYYSGYAPHTSRMPSSHGSPQVCRPHFPAPLHPWLTEPKSLPSGTWGNPFACPQEPQDKVSQVQSHQSGQHIFSFPPTPPKDSTPDSVQTGPTEYQAAVNAFMHQAQQQTSSTTSGSASENCVLDVKPSIQQNNSGQSAPKQREGTTSSNNHSSNNNNNTTQLNGGLFETPQSSYEGYENSYGGYHQNGGTGGSGGGGGVFQTSARTNMSPHHSKPQRTKQRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQSGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGMGGGCLPMGGHLGVGMSDLMKPLDPSKTFGGGFSSMGQHGHLSGGLHPAHMHSGWYTSSMSALGASGGLQGGFSTTGGLGGGVVPHSQSYHLGLGSMGTWRPDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -