Cfuc010923.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- hang
- Assembly
- GCA_001014335.1
- Location
- JXOR01000073.1:276749-284127[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.00067 0.056 13.4 2.7 2 23 248 270 248 270 0.96 2 25 1 83 3.4 4.5 2 23 351 374 350 374 0.90 3 25 0.078 6.5 6.9 0.8 3 22 381 400 380 400 0.95 4 25 0.039 3.3 7.8 0.7 3 23 445 466 443 466 0.89 5 25 8.7 7.2e+02 0.4 0.2 3 21 479 497 478 498 0.89 6 25 0.065 5.4 7.1 0.2 3 23 507 528 505 528 0.89 7 25 0.00021 0.017 15.0 0.8 3 23 573 594 571 594 0.95 8 25 3.6e-05 0.003 17.4 0.3 1 23 602 625 602 625 0.98 9 25 0.06 5 7.2 1.2 3 23 668 688 666 688 0.98 10 25 0.0007 0.058 13.3 0.9 1 23 692 715 692 715 0.97 11 25 5.7e-05 0.0047 16.7 0.7 2 23 783 804 783 804 0.97 12 25 0.0029 0.24 11.4 1.2 2 23 846 868 845 868 0.95 13 25 0.00063 0.052 13.5 0.2 2 23 877 899 876 899 0.96 14 25 0.24 20 5.3 1.5 1 23 931 954 931 954 0.92 15 25 0.02 1.6 8.7 1.5 1 23 984 1006 984 1006 0.98 16 25 0.0024 0.2 11.6 3.1 2 23 1015 1037 1015 1037 0.96 17 25 2e-05 0.0016 18.2 0.3 2 23 1045 1066 1044 1066 0.96 18 25 0.0057 0.47 10.4 4.7 2 23 1094 1115 1093 1115 0.96 19 25 0.00088 0.073 13.0 0.0 1 23 1155 1177 1155 1177 0.93 20 25 0.00026 0.022 14.6 0.2 3 23 1215 1236 1214 1236 0.94 21 25 0.024 2 8.5 0.8 2 23 1257 1278 1257 1278 0.87 22 25 4.6e-05 0.0038 17.0 0.1 2 23 1291 1312 1290 1312 0.96 23 25 0.0027 0.22 11.5 1.0 2 23 1513 1534 1512 1534 0.96 24 25 0.48 39 4.4 0.2 1 14 1574 1587 1574 1591 0.86 25 25 0.019 1.6 8.8 3.6 2 23 1603 1625 1602 1625 0.95
Sequence Information
- Coding Sequence
- ATGGCGGACGAACTATTGAATAAAGCAAGACGGATTTGCTGTCGACTGTGCTTGGCACCAGAAAACGAGTGTGTTCCAATTTTCACATCGACAGCTGCTGATAAAGAGCCCAtcgcatttaaaataaatgccTGCGTCAGTATAAAGGTGGAAATATCAGATTCGCTATCTTCAAAAATATGTCATGCTTGCATAAGCTATTTGAATTCCTGGCAGAGTTTCAAAAATCGATGTCTTGTGGCacagaagaaacaaaaaatatggaTGGATATGTTAATATCGAAAGAGAACAACCGAATACGACAACAGCAGCAGCACAATCAGTTGCAGTCAAGTGGCGTCTCACCTCAATCGGGCAAGGATAATGGCCCAAATATCAATGGAACATTAGATAATGCAGATAATATCGAATCAATGTTACTGGATCCTAAAGTGGTAATTAAGGAAGAGCCAATCGATTTACCATCAGATGATGAATTAATGGAAAAGGAAGAAGATATCGATCCAGCGCAATTTTTAGCCACATCGAATGACGTGGACCCTTATCACACGGACAGTAGTATACGAGAATCTACTGATGGGCCACCAATACTAACGTCGTTAGGGCTTACACATATAAATAGTGTAAATCCATTCAGTTTTCTTaGTACTGAACTAGGTCACGATTCAACAATGGCTGAATTGGACTCATCAGCCGGTCCAATGCCAGGTGTTATACCAGAACAGCCTAGAGCTCAACCAAAGTGTTCAATTTGTCATATGAAATTTTCGAATAGAGCAAATGCACGTCGTCACGAACGTAATATTCATGGTAAAGCATCCACTCATGGGCAATTAGCTCAACAAAAACAGctattaaattcatctataTCTCAACTAAAACCGAATCAACCAATaacgtcatcatcatcaaaaccGAAGAAACAAGTACAACCACCAATCGatccaaatatttataataatccaGAAAATTATCGTGAATTATTGACGGATGCAAAAATTCAGTTTATCCGGAGGAATCTAGATTTCTTGGAACAGTATCAGCATTTACGTTGTAAATGTTGTAATAAAGAGTATCcgtcatataaatttttcatggCCCATATGAGGAAAAAATATCACAACTTAGCAAGGAATTTGTGTTTCAAGTGTTTGAAACAATTCCAGACTAAAGCACAGTTTATTGCGCACTTGAAAcgtaaaaattgtataaatctCTATCGATTGTACAACGCGGATGATACAATACCTAAAAACTTGGGATCCGATGAAGTGGGACAATTGAAAGAACGACAGAGTGCTAAAGAAATGCtgacaaataaaatgtacGGTTGTAAAATGTGTACGAAAACATTCAGattaaaaatggattttcGTGGTCATGTTTATGAAGCACACGCCGATCAACAAAAACGTGATGCGCCTAGCTCTCTTTGTCCGTTCTGTAACGTTGATTTTGGTGATTCGCAAGTACGGCGTCGCCATTATAATAACATGGAgtgtatattatttataatttgcgGCACATGCGATGGACGGTTTGAAaataataccaattttataaCTCATGTATATGAGACTCATATGTTAACGGCAGCTGATCAAAATGGTGTTGAAGATGTGCCACTGGATGATAGTAATTTAGAAAGTATAAGCggaattaaattggaatgtGAAAATCTATCACCATCCGCAACATTACGACAACCACAAAATTGTACAGTTTGTGgcaaacaatataataattattataatgtgttACGACATATGGAATCAAAGCATCCTGATCAATTACCGGCTACCTATCGTTGTGAATTATGTAACATTGGTTATCCAAGACAGACAGAACTAAGGGAACATATGTTAACACGACATGGTGGTGAAATGCCAATTAAGGTAAAGAAACCTGATGCAATTTCATGTAGATTTTGCGTTGGTCTCAGTTGTGATACAAAGGAGGATTGGGTAAATCATCAAGCCACCGTTCACAGAGAATTTGGTTGTAACCATTGTATATATACCAcaacaaatcaaattgaatttgaggCGCATTTAAATACCCATGAGAAAAAATATACATGTGAAATTTGTGAACACTCGTTCCAATCGATTAAATCATTAACAACGCATGTTCAAGTCGTTCATGAAATGAAAGCAGATGGTAGCGAAAATGTTGCTGGTAGTAGTCACAGTGCATCAGGACTGTTCATGGATGATGGTTACGATGAGGatttagatgatgatgatggattTGATGACGGTAACGATGCTGATAATGATGAAACTATGGATCCTGCTGCTAAACGACGAAAATTAATGGCTTCACCAAATGTGTCAACGATTCGCGAATGCAAACTGTGTCACGCTGTATTTAATAATAGTGTTGGACTAGCAAATCATATGAGAAGTCATCCGTCTGGAAGTAAGATCACTCTCAACACGTTAAATGCATCCAATACCATTAAACAATCATCGCAAAGCTTATTGCAACCGAACAGAGGTGATGCCGCCGCCACACCGTCGGTCAGTAGATTACGTTGCCATATTTGCAAAAAGAGAATTTACACAAAAGCTGGCTACGAACAGCATATGCAGGAAGTGCATCAAGTGAATAcacttgaatttaaaaaatgtgaATTGTGTCCAGCCGAATTTAGTAACAATAAAGGTTTGAAAGTGCACATCTATCGGGCTCATCGACAGCAAGAGGAAATGAAATCATCTATGATGGATTCTAGTAACACTTCACTATCAGACTTAATTGCTGCTAAAACGTTTGGTTCAATGTTACATGAATGCGATATCTGTTTAACGGTATATCATACCGATGAGCAATTAAGAGTCCATAAAAGCTTAATGCATAATACATCGTCCGAgaGTTTCAAAAATAGTACGATTAAATTGGATTCTGATTTTGATAATTCATCAATGGATCAAATGGAATTACTATTTCAATGTCGATTTTGTGCTGCCACTTTTAATGCCAGGAAGAAATTAACATTACATATGAACAATCATACTGAATATGATCCATCAGATAATACATGCAAAGATTGCGGAAACGTATATAGAAGCAGGAAATCATTGTGGGTACATCGACATAAAAAGCATCCAATGAAACCGGATCCGTCCCCTTGTGATTTatgtgataaaatattttacgaTAAATCTgaactttttattcatttgaaaaatcaTTCTGATGAAGATGCTTTACCATTATTACAACAATTGCAAATCCAAATTGAACAACAGCAAGTGACAAAAACTGAAGAGTTGAATTGCCATATTTGTCATCAGCAGTTTTTCGATAAGCGAGTACTGAGTAAGCATCTACGAATCCACGAAATGGATAATTCCTATAATAGCTCTCAGCTTGTCGCTATGTTGGATACGGGAGATGATGATTCAGTGCAAGAAGCCGCTCATATGCCTTACCAAAAGCAATTGGTTAACGGAGAATATGCCTGTGATATATGCCCTAAATCATTCCCTCTGCTGACTGCATTGAAAGTTCATCGTGGTTGGCATTTCCGTGGCCCGGATGGACGTCAAGTAACTGACCCAGATAATATGTGGCAGCCAGGTGTCGGGCCACCAAGTAGGGCACGACGTCTCCGTAATCCAATGAGACCACCAATTTGTCCGTACTGTAATTCGAAATTCGCTAGTACAAATAATTTACGACGACACATAATCGAAGTGCATAAACGGAATGAAGCTCGATTACAAAAAACTGGTGAACAATTAGTAACAGAGAAGGAAAATGAATGTAAGCAgtgtaataaatcatttaattcaagaCTAGAATGGGTTGAACATAAAGTCCAACATGTGAAAACAATGAAACCAAGTGCTACATTCGAGTGGATTTGCGATATTTGTGCTAAAGTATTTACAAGGAAAGAGCGACTACTTGCCCATATGATTTCTCACGTTAGTAAAGAAGATCAGGATCACGTGGAAAATGGAAATGTACAAGATGACGGCGGAGTTGACATTGGATTTGATAGTAATTCGCAAAGTACAGTTAGTTCGAGTCAGCGaaatattgatgaattaaaagatGGAAACGGTATTAATCAAGAGTTCAATAACAAAGTAAATATGattgacgatgatgatgaagaagatTTTGAAGGTgttgaagatgatgatgatgatgaggatGATGTAATTGAAGATGGTGTTGAAGATGAAGAGGATGATGTCGATGAGGATGGAATCGATAATAATGAGGTTCAAGAGattgacgatgatgatgatgaggatgatgatgaagatgatggagatgatgatgatgatgctgaAATAATTGAGGATAATGATCAACCGGGTGAGATGAGACAAAATTATCGTCAATACGTTGAAGATCTCGATGAGGATGAAGAAATGGATGATGCAGAAGAGGCAGATGATGATGTACATGAAGTCGAGGAcgatgatgacgatgacgTTGAAATCATTGAAGACGATGAGGATTATGACGATGAATCAAATGATGGATCGAATGCTGAAGAAAGTAATGCGCTTAAATCGTGTGATTTATGTCAAGTATTtttcaaaacagaaaaagagtTACGATTACATATCACGTCTCATATATTTAATACACCGATGCCGCCAACATCAGCAACCGGAACAGGCGATACGCCGTTAAAGAAATCACCATCTGTACAACAGAATAGTAATACGACAGTTTCAACTGGAGTCgtatcatttaaatgcaaattatgtGGCAGCGCATTTGATTCACAGCAGAAGATGTTGAATTGTTTGGATGATCATAGGAAaggaacaaataataaatgcaCGGATTGTAATGTCTTTTTCTCCAATGATAATCAACTGAATGATCATAAAAAATTGTGTCATTCGACAACAAATGCTTAA
- Protein Sequence
- MADELLNKARRICCRLCLAPENECVPIFTSTAADKEPIAFKINACVSIKVEISDSLSSKICHACISYLNSWQSFKNRCLVAQKKQKIWMDMLISKENNRIRQQQQHNQLQSSGVSPQSGKDNGPNINGTLDNADNIESMLLDPKVVIKEEPIDLPSDDELMEKEEDIDPAQFLATSNDVDPYHTDSSIRESTDGPPILTSLGLTHINSVNPFSFLSTELGHDSTMAELDSSAGPMPGVIPEQPRAQPKCSICHMKFSNRANARRHERNIHGKASTHGQLAQQKQLLNSSISQLKPNQPITSSSSKPKKQVQPPIDPNIYNNPENYRELLTDAKIQFIRRNLDFLEQYQHLRCKCCNKEYPSYKFFMAHMRKKYHNLARNLCFKCLKQFQTKAQFIAHLKRKNCINLYRLYNADDTIPKNLGSDEVGQLKERQSAKEMLTNKMYGCKMCTKTFRLKMDFRGHVYEAHADQQKRDAPSSLCPFCNVDFGDSQVRRRHYNNMECILFIICGTCDGRFENNTNFITHVYETHMLTAADQNGVEDVPLDDSNLESISGIKLECENLSPSATLRQPQNCTVCGKQYNNYYNVLRHMESKHPDQLPATYRCELCNIGYPRQTELREHMLTRHGGEMPIKVKKPDAISCRFCVGLSCDTKEDWVNHQATVHREFGCNHCIYTTTNQIEFEAHLNTHEKKYTCEICEHSFQSIKSLTTHVQVVHEMKADGSENVAGSSHSASGLFMDDGYDEDLDDDDGFDDGNDADNDETMDPAAKRRKLMASPNVSTIRECKLCHAVFNNSVGLANHMRSHPSGSKITLNTLNASNTIKQSSQSLLQPNRGDAAATPSVSRLRCHICKKRIYTKAGYEQHMQEVHQVNTLEFKKCELCPAEFSNNKGLKVHIYRAHRQQEEMKSSMMDSSNTSLSDLIAAKTFGSMLHECDICLTVYHTDEQLRVHKSLMHNTSSESFKNSTIKLDSDFDNSSMDQMELLFQCRFCAATFNARKKLTLHMNNHTEYDPSDNTCKDCGNVYRSRKSLWVHRHKKHPMKPDPSPCDLCDKIFYDKSELFIHLKNHSDEDALPLLQQLQIQIEQQQVTKTEELNCHICHQQFFDKRVLSKHLRIHEMDNSYNSSQLVAMLDTGDDDSVQEAAHMPYQKQLVNGEYACDICPKSFPLLTALKVHRGWHFRGPDGRQVTDPDNMWQPGVGPPSRARRLRNPMRPPICPYCNSKFASTNNLRRHIIEVHKRNEARLQKTGEQLVTEKENECKQCNKSFNSRLEWVEHKVQHVKTMKPSATFEWICDICAKVFTRKERLLAHMISHVSKEDQDHVENGNVQDDGGVDIGFDSNSQSTVSSSQRNIDELKDGNGINQEFNNKVNMIDDDDEEDFEGVEDDDDDEDDVIEDGVEDEEDDVDEDGIDNNEVQEIDDDDDEDDDEDDGDDDDDAEIIEDNDQPGEMRQNYRQYVEDLDEDEEMDDAEEADDDVHEVEDDDDDDVEIIEDDEDYDDESNDGSNAEESNALKSCDLCQVFFKTEKELRLHITSHIFNTPMPPTSATGTGDTPLKKSPSVQQNSNTTVSTGVVSFKCKLCGSAFDSQQKMLNCLDDHRKGTNNKCTDCNVFFSNDNQLNDHKKLCHSTTNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -