Cfuc008284.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- SMARCC2
- Assembly
- GCA_001014335.1
- Location
- JXOR01000629.1:358895-362858[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 2.8e+02 1.2 0.0 33 44 199 210 195 212 0.89 2 2 5.9e-14 3.7e-11 42.4 0.2 3 44 641 682 639 684 0.95
Sequence Information
- Coding Sequence
- ATGTCGCTGGGACCCAAGAAAGATGGGAGTCCCAATATGGACTATTTCAACTCGTCGGAAGTGCTGCAAGGCTTCGAAACAGTGAGACTGTGGCTCCAGAAAAACTGCAAAAAGTACATGCAACCGGACCCGCCGACCAAAGAATCTCTGGCACAGTTGTTGATCCAACTATTGCAGTACCAGGAGACCAAATTAGGGAAGAATGCCACCGACGCTGGCACTACCAAGTTGCCGATGAGCTGCTTCATGGACTTCAAACCAAATGGTGCTTTGTGTCACATATTTGCAACTATGTATCGGTACAAGGCGGATCAGCGGTGGCGTAAATTTGATTTCACGATCGCCAAGAATCAGTCACGCAAAGACCCGTACACCCAAATGTTAATAGATATTGAAACAGCTCTCGGTGATGCTGATTGCTTACGATATCCCGTTGTTTACATACGGCCTGAAGTTGATAAGAACTTGGCAACTAAAATCAAAGGCATCGTTACTAACCATCAAGGTGAAGTGACCGAAGACGAAGAGGAAGCATCTCACATAATTCACCCGGTAATTGACCCGGTACCAGAAGAGTATGCTCGTCCCTTCTTCCGCAAAGACAAACAAGTGATGTTGCATTGGTATTATTTCCCCGATTCATATGATACGTGGGTTCCAGTTAATTTCGATTTACCGGAAAATGTTCCCGAGAGTCCGCCAACTCCACCAAACCATTGGAACGTAACAGCTTCTTGGGTATTAGATTTAGAATCTTATAATGAATGGATGAATGAAGAAGATTATGAAGTCGATGAGCAGGGAAAGAAGAAGGTCCATAAGTTTAGATTATCGGTTGATGATCTAATACCGAATTGTCAGGATGACAAAAAGACACCCGCCAAAACAGGTGTAACTAAGCAGAAACGAAAACGTTCCCCATCACCACCGGCCAAAGGCGCTGGTAAACGTAAAAGTGCTAGATCTCCTGCTGTTTTTCAAAAGAAATCTCGTGCTGGTGACGGTGATGACGAAGAGGATCTAACGAGAGACATGGAAGACCCAACACCAGAGCCAAACATAACTGAAGTAACAAAATCAACATCTGCATCGAGCAGTTCATCAGGTAATATGGGTGGAAATCCAGCTACACCATCAACTAAACAAAAAGATGCTGAAATGCTACCAATCAAGGGTGGTACAGTAGCTGATTTAGACGAAGAGATGGAACGTGGCGCTGAAGATTCACAAACAGGCAAAACGAGTGATAACAGTAACACACAAGATTTTCCACACAAAGATGATTTAGAGGACAACGTCACCGAACAGACGCATCACATTATTGTTCCATCATACTCTGCATGGTtcgattataattcaattcatgtgATTGAGAAACGAGCTATGCCTGAGTTCTTTAATGCCAAGAATAAATCAAAGACTCCAGAAATCTATATGGCATACAGAAATTTCATGATAGATACGTATAGATTGAATCCAACGGAATATTTGACGAGTACAGCTTGTAGGAGAAACTTGGCTGGAGATGTGTGTGCTATAATGAGAGTCCATGCATTTTTAGAACAATGGGGATTGATTAATTACCAAATTGATGCCGAATCACGGCCTACACCAATGGGTCCTCCACCAACATCTCATTTCCATGTATTAAGTGACACACCATCTGGTCTACAACCGGTAAATCCTCCGAAAACTGTTCAACCATCAGCAGCCAAGACATTATTCGATCTTGATAAAAAGCCTAAGGATAAGGACAGTACCGAACCGGTACCAGCTGGTGCTGAAGCAAATCCAACTGGAGTTACagtgaaacaagaaaataatgttcTCGATCCAAATGCACAATTCGGTTTGAAATTAGATCAGTATACAAAGAAACCATCGGCTATGCGTAATAAAACGGCAGCCAGTATGTCTAGAGAGTGGACAGAACAAGAGACATTGTTATTATTAGAAGGTCTTGAAATTTATCGTGATGATTGGAATAAGGTTTGCGAGCATGTTGGCACACGAACACAAGATGAATGTATTCTACACTTCCTGCGATTACCAATTGAAGATCCTTATCTGGAAGACGATAATGGATACTTAGGTCCATTAGCATATCAACCCATTCCATTTAGTAAATCTGGTAATCCAATTATGTCGACAGTGGCTTTCTTAGCCTCAATCGTTGATCCACGAATCGCTGCTGCTGCTGCCAAGGCTGCTATGGAAGAATTTGCTACAATAAAGGAAGAAGTACCACCTGGTATTTATTATGCCCATTACATGAATGTGGAAAAGGCTGCTCAAAAAGGAAAGTTTGATCCGAATGCTGGACTTGCTAATAGTGGTATTGCAGGTACAGGACCGGATAAGGAGGAGGAAGATGgtaaaaatgttaatcaagatgaagaaatgaaagagACGCCAAAAGAAAGTGAAAACAAACCTGAAGAAAAATCTGACGAAAATAAGAGCACAGATCAATCATCGCCTAGTTCCGGTGACAAGACTATTACACCATCATCTAACAGTTCTGACGCTCGTAAGGAGAATGCTACTACCGGTGAACAATCTCaagatcaaaatgaaaaatcttctGACGAAGTGGTTAAAGTAAACGGAACAACAGAAGATGGACAACAGCAATCAGAGGAGCAAAGGAAGTTATTTAATGAGGCTGATTTACAAAGGGCAGCCGCTGCAGCACTCTCAGCTGCCGCAGTTAAAGCAAAACATATGGCTTCATTAGAAGAACGAAAAATTAAGAGTCTAGTGGCGTTACTCGTGGAAACTCAAATGAAGAagttagaaataaaattacgtCACTTTGAAGAATTAGAAACAACTATGGAACGCGAACGAGAAGGATTAGAATATCAAAGGCAACAGTTAATAACTGAACgtcaacaatttcatttagaacAATTAAAAGCTGCCGAATTCCGGGCGCGACAACAGGCACATCATAGGCTGCAGCAAGAACAAGGCCAGCAATGGCAACAATCTGGAAATGTACCGCCAGCAGGAGTTCCACCACCTGAAGCCACAAGCCAACATCCAGTGGCACCTCCTCATGCAGCCCAACAAAACGGACAAGGGGCTCAACCTGTACCACCAACCGGTCAAACAGTCCAACCAATTCCAGCCGGCCAGCCAATGGTGCCGCCAATTGGAGGCGAAACTAATCCTGTTAATCCGTCACAAGCAGCACCACCACCTGCAATTCCAGTTAGCCAGTAA
- Protein Sequence
- MSLGPKKDGSPNMDYFNSSEVLQGFETVRLWLQKNCKKYMQPDPPTKESLAQLLIQLLQYQETKLGKNATDAGTTKLPMSCFMDFKPNGALCHIFATMYRYKADQRWRKFDFTIAKNQSRKDPYTQMLIDIETALGDADCLRYPVVYIRPEVDKNLATKIKGIVTNHQGEVTEDEEEASHIIHPVIDPVPEEYARPFFRKDKQVMLHWYYFPDSYDTWVPVNFDLPENVPESPPTPPNHWNVTASWVLDLESYNEWMNEEDYEVDEQGKKKVHKFRLSVDDLIPNCQDDKKTPAKTGVTKQKRKRSPSPPAKGAGKRKSARSPAVFQKKSRAGDGDDEEDLTRDMEDPTPEPNITEVTKSTSASSSSSGNMGGNPATPSTKQKDAEMLPIKGGTVADLDEEMERGAEDSQTGKTSDNSNTQDFPHKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNAKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTVQPSAAKTLFDLDKKPKDKDSTEPVPAGAEANPTGVTVKQENNVLDPNAQFGLKLDQYTKKPSAMRNKTAASMSREWTEQETLLLLEGLEIYRDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDNGYLGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRIAAAAAKAAMEEFATIKEEVPPGIYYAHYMNVEKAAQKGKFDPNAGLANSGIAGTGPDKEEEDGKNVNQDEEMKETPKESENKPEEKSDENKSTDQSSPSSGDKTITPSSNSSDARKENATTGEQSQDQNEKSSDEVVKVNGTTEDGQQQSEEQRKLFNEADLQRAAAAALSAAAVKAKHMASLEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQGQQWQQSGNVPPAGVPPPEATSQHPVAPPHAAQQNGQGAQPVPPTGQTVQPIPAGQPMVPPIGGETNPVNPSQAAPPPAIPVSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -