Cfuc010352.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- bab1
- Assembly
- GCA_001014335.1
- Location
- JXOR01000200.1:86181-91628[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-17 1.9e-14 52.5 0.0 2 45 442 486 441 486 0.95
Sequence Information
- Coding Sequence
- ATGTCCGTGCAACAATTTTGTTTGCGGTGGAATAATCATCAGCCAAATTTCATATCAGTGTTTTCCTCGCTTTTGCATAATGAAGCATTAGTGGATGTTACTTTGGCTGCTGAGGGCAAACAATTACAAGCGCACAAGGTGGTACTCTCGGCATGCAGTTCATATTTTCAGACGCTGTTCACAACAAATCCATGTCAACATCCGATTGTAATCCTTAAAGATGTCCACTATAATGATCTTAAGACAATGGTGGACTTTATGTACTACGGTGAAGTGAACGTGTCACAGGAACAGTTGCCACACATACTTAAGACCGCCGAAATGTTAAAGATAAAGGGTCTGGCTGAGATGCCCGAATCATTAACAAAATCTGATAATAAATCATCGGATCAGACCGATCAAACGAATACTGGAAATGGCGGTGACACTCTGTGGGGAAGCAACGAATCTCAGCCACAATACTTGCATCATCAGACACAGCAACGTAAATCGCCATCACCTGTGGCCGGAATGTCACCATCAGCAAGACGAAAACGTTTACGAAAGCCATCTACAGAACGGCTAACTGATGAACACGGCAGCATTATTGAAGGACATACTGGACTTAAATCATCAAAAGAAAGTGTTGATATGGATTCTGGACACCAGGATGTAACCCATGAAACTATAGATGATTCATCATCCCATCAAGTACAACAAATTATCCCGATGGCAATGTCTGGAAGTCCAGCAACACCAACAAATAGCGATCCCTCGACATCGACCACGCATATTTCACATCATCAGCAGCACACAAGTGTGCAATGGGCTGTTGTCGACCCAACCTATCCACGTTTTGCGATCTCCTCGTGTGCATCTAATATTGGACTGTCGTCAAATCAACCGAACAATCCAAATTTAGAAGCGACCTCAACTAGCACATCAGCAGTTAACTCAACACTGACATCAACTGGAAGTGGTGCAGCAACTAATAATGGTGCTGGTAATAGTGGTGGTGGCCAACAGTCTCATATTCAAATGCAATATTCAGGTGGTTCACCATATTCATCgcaaataatatcaattaatccGAATAATACGgtaaatcattcaaattatccGTCTACAATGTCGACGTCCACATCACCTCATGAGGGTGAATCGGCAACGGTGAATGTACAAACAGTTTATAGTCAAGGGCCAACACCAAATCAATCGCCTGGTCCACAGATTGCATCACATGGACAAGCTAATACTTCACAGCATCATGCATCTGGTTCAGGTAATGCATCTAGTGGAACGCCTGCaccacaaaaaagaaaacgttcCGTAAATCCACAAGGTGATGAGAATTTTGTACGGGCATTGGAAGCGGTACGTTTTGGTGGTATCGGTTTTTGTAAAGCGGCACGACTGTACGGCGTTAATAATCGAACGTTATGGTTAGAATACAAGAAACGTGGATACCCAATCAGTCGACCAAGTATAAAGAATCGAAAAATTGAACTGAAACTGGAACCAGATATGTCACCGGGACCATCAACACCGCCGAATGAGGAGAACACATCAATGGAAAACTATAATAATATGTCACAATCTTCTATTAATATGTCTGGTACAACGTCAACGGAAACATCAACACCATTAATGTGTCCTCCGCATGCACATTCAATGGGTGTTATGAGTTTTTTAGATACGAGACAAGTGGAATTTCCATCCGGGATTCATCCGATGAATCGGCAAAGATATACGGATGGAACGACGGTTAATGTAAATTCAACGGCAATGAATCTACAGGGcctgaattttaattcaatgtaa
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVFSSLLHNEALVDVTLAAEGKQLQAHKVVLSACSSYFQTLFTTNPCQHPIVILKDVHYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPESLTKSDNKSSDQTDQTNTGNGGDTLWGSNESQPQYLHHQTQQRKSPSPVAGMSPSARRKRLRKPSTERLTDEHGSIIEGHTGLKSSKESVDMDSGHQDVTHETIDDSSSHQVQQIIPMAMSGSPATPTNSDPSTSTTHISHHQQHTSVQWAVVDPTYPRFAISSCASNIGLSSNQPNNPNLEATSTSTSAVNSTLTSTGSGAATNNGAGNSGGGQQSHIQMQYSGGSPYSSQIISINPNNTVNHSNYPSTMSTSTSPHEGESATVNVQTVYSQGPTPNQSPGPQIASHGQANTSQHHASGSGNASSGTPAPQKRKRSVNPQGDENFVRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRKIELKLEPDMSPGPSTPPNEENTSMENYNNMSQSSINMSGTTSTETSTPLMCPPHAHSMGVMSFLDTRQVEFPSGIHPMNRQRYTDGTTVNVNSTAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00348277;
- 90% Identity
- iTF_00348277;
- 80% Identity
- iTF_00348277;