Cfuc006478.1
Basic Information
- Insect
- Coboldia fuscipes
- Gene Symbol
- kn
- Assembly
- GCA_001014335.1
- Location
- JXOR01000295.1:220396-242404[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-233 7.8e-229 760.2 0.0 12 385 21 410 12 414 0.97 2 2 7.5e-10 8.8e-06 23.7 15.7 420 512 412 506 408 536 0.72
Sequence Information
- Coding Sequence
- ATGTTTGGACTACCGCCGAGTGGTAGTGAATTAAATCAACCCAGAGGACCAGTGACATCGTTAAAAGAGGAACCACTTGGTGCCAGAGCATGGATGCAACCACCAGATCAATCAAATTTGGGGATAGCTAGAGCACATTTTGAGAAACAGCCACCAAGCAATttgagaaaatcaaattttttccattttgtcaTCGCATTATATGATCGAGCTGGAcaaccaattgaaattgaacggACTGCATTTATCGGATTTATTGAAAAGGATCAGGAGGCTGATGGtcagaaaacaaataatggtATCCAATATCAACTGCAACTTCTTTATGCTAATGGTGCTCGTCAACAACAAGATATTTTCGTACGGCTAATTGATTCGGTTACAAAACAGGCAATTGTATATGAGGGACAGGATAAGAATCCGGAAATGTGTCGAGTATTGTTGACACACGAGGTCATGTGCAGtcGATGCTGTGACAAAAAGAGTTGTGGTAACCGAAATGAAACACCATCAGATCCGGTTATAATTGACAGattctttttaaaattcttcttaAAGTGTAATCAAAATTGTCTTAAGAATGCTGGTAATCCACGTGACATGAGACGTTTTCaaGTGGTGATTGCAACCCAAGTGGCTGTTGAAGGTCCATTGTTGGCTATTTCGGATAATATGTTTGTCCATAATAATTCAAAGCATGGACGCCGTGCAAAACGGATGGACAACACGGAAGGTACAACATCTTCATCTCCATTGGCCATTTCGGGTCATCCATTAGCGCCGGACAGTACGTACGACGGTCTTTATCCACCGTTACCGGTAGCAACACCATGCATAAAAGCGATCTCACCAAGTGAGGGATGGACAACGGGCGGTGCCCAAGTTATAATTGTAGGTGATAATTTCTTTGATGGACTACAAGTTGTTTTTGGTACAATGCTCGTATGGAGTGAGTTAATCACATCACATGCAATTCGTGTTCAAACACCGCCAAGACATATACCGGGTGTTGTAGAAGTTACTTTGTCTTATAAAAGTAAACAATTTTGTAAAGGTTCACCAGGTCGTTTTGTTTATGTTTcaTTAAGTGAACCAACAATAGACTATGGATTTCAACgattacaaaaattaattccacGACATCCAGGTGATCCAGAAAAATTACCAAAGGAAATAATACTAAAACGAGCTGCTGATTTAGCTGAAGCATTGTATTCGATGCCAAGGTCACCGTCATCAAGTGCAGCtggatttaattcatattcaggCCAATTGGCCGTTAGTGTCCAAGATGGTAGTGCACAATGGGCTGAAGatgAATATCAACGGGCCCAAAGCAGTAGCGTTAGTCCACGTGGTGGTTATTGTAGTAGCGCATCAACACCACATTCATCAGGTGGTGGATCATATGGTGGTGGTAATGGTTATGGTCCATCAGCTAATATGGGCGCAATACCATCATCACCAGCAAGTGTATTTAATACGACATCGAgTAGTGCATTTAATACGTTAACTGGaccatatgaaaattcaacagcATATGCATGGCATCAGTCCCAATATATTCTACCGATGCATGTATCATCAACCGCTTCGTTTGCatcaacaacataa
- Protein Sequence
- MFGLPPSGSELNQPRGPVTSLKEEPLGARAWMQPPDQSNLGIARAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQEADGQKTNNGIQYQLQLLYANGARQQQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVAVEGPLLAISDNMFVHNNSKHGRRAKRMDNTEGTTSSSPLAISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPSSSAAGFNSYSGQLAVSVQDGSAQWAEDEYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGNGYGPSANMGAIPSSPASVFNTTSSSAFNTLTGPYENSTAYAWHQSQYILPMHVSSTASFASTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320381;
- 90% Identity
- iTF_00347941;
- 80% Identity
- iTF_00347941;