Cmed039020.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Gata5
- Assembly
- GCA_014851415.1
- Location
- Chr16:7077031-7078621[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-09 2e-05 23.9 0.1 22 35 36 49 34 50 0.90
Sequence Information
- Coding Sequence
- ATGAGACGTGACACGATCCACACGAGACGCCGGCGGCCGAGACACGACGCCAAGCACAACCGGAACAGTAAGCTACTTATATATCTAGACTGCTATATAGAGATGGTCTGCAACGCCTGTGGCTTGTACTACAAGCTGCACGGGGTCCCGCGCCCTACCGCCATGAGACGTGATACGATCCACACGCGACGCCGGCGGCCGAGACACGACGCCAAGCACAACCGGAACAAGTCTCGACGGAACGGCGGCGCGTGCGCGGACGGCAGCGAGACGGGCGGGGGCGGCGGGGCGGCTGCGGGCGGCGGGGCGGCGGGCGGCGCGGGCGGGGCGGAGGCCGGCGCGGAGGAGGCGGTGCTGGCGGCGCTGCGGCGGCAACTGCAGCCGCACCTGCTGGCCGCGTTGCACGCGCACACTGCTCGCGCGCCTAGGTCGCATCGCCCGCAGGTGGGACTGAACGCTCCGGAGTACGACGAAGCGCCCCTGAACCTGGTGGCGAGCCACGTGGCCGCCGAGGAGACGCACTGA
- Protein Sequence
- MRRDTIHTRRRRPRHDAKHNRNSKLLIYLDCYIEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHNRNKSRRNGGACADGSETGGGGGAAAGGGAAGGAGGAEAGAEEAVLAALRRQLQPHLLAALHAHTARAPRSHRPQVGLNAPEYDEAPLNLVASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -