Cmed056600.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- GATA-B
- Assembly
- GCA_014851415.1
- Location
- ctg164:667113-680982[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-16 1.6e-12 46.6 7.8 1 34 245 277 245 279 0.97 2 2 1.7e-18 3.7e-15 55.0 9.0 1 35 298 331 298 332 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCTAATGTGCCCGTAATTGGTCCTTATCTCTTCCGGACGAGTTTTCCAAATTCGTCGCGGCATCAGCGCGCGCAGCGAGCGCGGGAGCGAGCGCCGCGTAATGCATGCAAGCGTGTCGAGGGCGGCGCGCGCGCCGATAACGCGCCTACTTCCGAGACGTTCCGAGCCATTAGCCTCGGCTCACTTCGCTCCATTTTAACACGACGAAATAACACTAGAAGACACGCTGTCGATGAACTTACTAAACTTACCCAACGAGTTCCGATAAACAGCGGCGGCGGCGGGCCCGGCGGCGCCGTGTACTCGCGCTGCGCATACACAAACTCTTCACCCTACTTCGGCAACCCGGAGCTCCCCGTCCACACCCAGCAGCAAATATGGAGCCCTAGCACAGCGGGCGGCTCCCCCACGTACGGCGGGTCGAGCGGCGGCACGGGCGTGGTGCTGGCGGAGGAGTACCCCGGCGAGGGCGGCGCGGGCGGCGGCGAGCAGCCGGCGGGCGGCGGCCACGGCGGCTCGCTGCCCGCCTTCAGCGCGCGCTTCGGCGGGCCCTTCGCCTGCGCCACGTCGCGCGCCTCCACCGTCTACGGCAACCCCTCGCTCGCGCCCAACTCCTACACGCATCAGGACGTGTGGGGCCTGGACGGCAGCCGCCGGCCGCAGCTCTCCGCCGCCGCCAGCTTATCAGCCATCGATATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGGACCGTGCACACGCCGCTGTGGCGGCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGACGGGCACGAAGCGGCCGGGCACCACGTGCACCAACTGCCACACGACCACGACGTCGCTGTGGCGGCGCAACACGCACGGCGAGACCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTCAACCGCCCGCTGGCGATGAAGAAGGACGCCATACAGACGAGAAAACGGAAACCAAAGAATGGGGTGAAGACAGAACGAGCTCTCAAGACAGCCGTGCAGCGGACGCTCGCGGCGGGCGTCAAGATGGAAAATTTACTAGACACCGGGTCGATGGTGGGCGGCGGCGCCGGCGCGCGCTCGTCGGTGGCGCTGGGCTACTACGCCGTGCAGCACGCCTTCAAGCTGGAGGAGCCCCCGCCGGCGCACGCGCACGCGCTCGAGCACGCGCCGCTCGACGACGACTACCGCCGCGCCGACGACCGCCTCGACCGCCCCACCATCGTCTCCATGGGCAGTTGA
- Protein Sequence
- MEANVPVIGPYLFRTSFPNSSRHQRAQRARERAPRNACKRVEGGARADNAPTSETFRAISLGSLRSILTRRNNTRRHAVDELTKLTQRVPINSGGGGPGGAVYSRCAYTNSSPYFGNPELPVHTQQQIWSPSTAGGSPTYGGSSGGTGVVLAEEYPGEGGAGGGEQPAGGGHGGSLPAFSARFGGPFACATSRASTVYGNPSLAPNSYTHQDVWGLDGSRRPQLSAAASLSAIDMAEFFTEGRECVNCGTVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLTGTKRPGTTCTNCHTTTTSLWRRNTHGETVCNACGLYYKLHNVNRPLAMKKDAIQTRKRKPKNGVKTERALKTAVQRTLAAGVKMENLLDTGSMVGGGAGARSSVALGYYAVQHAFKLEEPPPAHAHALEHAPLDDDYRRADDRLDRPTIVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -