Cmed053170.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- CAMTA2
- Assembly
- GCA_014851415.1
- Location
- Chr13:6714280-6748315[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-15 1.8e-11 43.6 5.0 40 79 2 40 1 48 0.91 2 2 0.009 1.4e+02 2.0 0.2 106 116 42 52 39 52 0.79
Sequence Information
- Coding Sequence
- ATGCTGCTGTACAGCCGGAAGAAGGTCAGGTACCGAAGAGACGGGTACTGCTGGAAGAAGAGGAAAGACGGAAAGACTACCAGGGAGGACCACATGAAACTCAAGGTCCAGGGGACTGAGAACCCAGACATAGTCCTGGTGCATTACCTGAATGTTCCGTACCCTGACGACAACAAGCTGGCGACGGTGGCGCCGAGCCTGGCGCTGTGGGCCGACAAGAAGGAATGGACCAAGGATGAGCTGGTCAGCCAGTTGAAGCCCATGTTTTTCAGTGAAGATGAGCCGGACATCAATAGTGATTTGGAAATATCTGGAAAAATGTTCCAGACGGCGGAAACGGTGGAAGCCATCGTCGGACAGCTGATGGAGAAACAAAGAGCTGCAAGAGCCGCGGCGCTGGCCAGACAACTTGAATGCGGGTGCCCAGACTCCACCTGCCAAGACTCCCGGACATGCGCTCACCCACTTCGCCGCATACAGGCTGCCAAACCACCTCCTTCAGACCATCATGTCTCGTCTACAACTGGTCCCTCACCGCGACCTATGTCGCAGCCCCCCAGGCAGTACACGAGAGACCACCGGCCTGCACAGCAATCCGCCTCTCCGTTACTCCTATCACTTGGCCAAATTCAAGGCGGTGGTGGTCTCCTCATCTTAAATGGGACAACCAACACTACCCAGCAGCACTCGTCTTTAGTCTCACCTCTATCAGTGACGTCATTCGTCTGTGAAGAACCCAGAGACAGGTATCGACAGCAGTACAAACCAACGTTTGTTCTCAAAAGAGAAATACCTGATACTCAGCCTACATCTTGTCTTCACAACACCGAAACGACTTTTGAAGTGGAGACCCAAGTAGAGGAGAAAATAGAAATAAATACGTTTGAAAAGAAAATTAAAATGGAACCGAAGAGTAGAAATCAAATGATTGCGAGCGCGCCCGCCACGCCCTCGCGGTACCCAGACTTAGTTGAGCGATTAGAAAGGTCTAGTGGATTTTTTGATGAAACGTTGGAATTGTCACACGAGGACATACAGAAAACGCTATCAGCGAATATGCCTACGTGTGAACTAGATAGGAGTGTAGTAAGATCTTCCGATACGGCCAATGTGATGGTCTCTGGAATTGATACGATGGACTTTATAGAGAGTTGTGAAGCAGTAGCGTCGCCCACGCATGTTGTAGACGATAATGTATTTGTTAATCTGGATGCATTTGATATGCTTGGTGACTTCCCAGAATTGGAAGTTTTGGACCCCAGTTCACTATCGACAAATCCTGTGACTATGACCTTAAAGGTCATTTCCTTCCAGTCGTCCTGCGGCAAGTCCCCTCCAGCTGAAGACGCCACCGAAAAGATGCAAACAGAATGCAGCACTGAAGGAGCCCTGAGTATAACGGACTATTCTCCTGAGTGGGCGTACCCTGAGGGCGGAGCGAAGGTCCTGGTGGCAGGGCCTTGGACGGAGACGTCGGATCAGTATACTGTGCTGTTTGATAACTTTCCGGTGCCGTCGATACTGGTGCAGAATGGACTGTTGAGGTGCTATTGTCCAGCCCACGAAGCCGGCTTAGCCGCTCTCCAAGTCGCCCGCGCAGGTCGCGTGGTCTCAGACACCGTTGTGTTCGAATACAAGGCGGGCCCCGCGCCCGCGCCGTCGTCACCGGCGTCCGCGCCGCTGCCGTCGCTGGATTTTAGGCGCTTCACGCTGCTGCAGCGGTTGCAGCGGCTGCACGGCCGGCTGCAGGTGAAGAGTGAGCCGATGGATGATAACAATCAGATTGAAGACGTCCAACTCTACTCGAACCCAAAATTTGAAGAGCGGTTGGTATCCTTCTGCCGATCTCTCAGCCTGAGGTCCACAGGCATGTCAGAGGGGTTCACCACGGAGCCTGGCGAGGACGGGTCTACGATCCTACACTTGGCAGCGGCGCTGGGGTACACGAAGCTGACGACAGTCCTGCTGAGATGGAAGCAGGATGATAACAGCCTGGCGCTGGAGAAAGAAGTCAATTTGGGGGCGAGGGATGTGGATAACTGTACCCCTTTAATGCTAGCCAGTGCAGCGGGACACGTAGAAACTGCAGTGGTCCTGGCTCGATGGTCAGCCGGCACCAGGTGCGAGGCGGGCGCGCGCGCAGCGGCGGCCGCGGCGCGGCGGTCGGGCCACCAGCAGCTAGCGGCCTTGCTGGACAGGATACACCCACCGCCGAAAGATGCGGTTTTTCTGAGGCCTCATTCTCACAGTTTATCCCAAAAGGGCCGAGCTGGTAGTCTCGAGAGCAACCTGGTGAAAAGACCATCAATAGATAGCGGAATCAACATGGCTGATGCTTTCAGATCTAGTTCCGCCATCGACAAATCTGATACCAGCTCTGCTAGATGGGAACGAAGTATGTCCCTGCCGCTTGACTCCGACACGTCGGAAGATAGTCTCGGTGACGCCAAGATCGGCCGACGAATGGACCTAGCTCTTTGCGAGACCGCGTGGCGGCGCCCGGCGAGCCCGATCATAGACGTGGAGGCGCTGTCGTCGCCGTCGCCGCCGCCCAGCCCCGAGCGACCCAAGCCCCAAGGGGAGCAGGATGACCGAGTGTTCACGCTGGCGGAGCAGATCATAGCCGCTATGCCGGAAAGGATAAAGAACGAAAGTTCATCCTTGCTCTCTGGATGCGGGCTCGAAGGCAGCGGAGGCAGCGGAGAGGACACCCTCATGGTGCCTCTGCTCGATGACACGACCACCTTCAACACAGAGTTCAGCTTTGAATTCTGCGACAATACTTACAGGTTGGTCTGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTENPDIVLVHYLNVPYPDDNKLATVAPSLALWADKKEWTKDELVSQLKPMFFSEDEPDINSDLEISGKMFQTAETVEAIVGQLMEKQRAARAAALARQLECGCPDSTCQDSRTCAHPLRRIQAAKPPPSDHHVSSTTGPSPRPMSQPPRQYTRDHRPAQQSASPLLLSLGQIQGGGGLLILNGTTNTTQQHSSLVSPLSVTSFVCEEPRDRYRQQYKPTFVLKREIPDTQPTSCLHNTETTFEVETQVEEKIEINTFEKKIKMEPKSRNQMIASAPATPSRYPDLVERLERSSGFFDETLELSHEDIQKTLSANMPTCELDRSVVRSSDTANVMVSGIDTMDFIESCEAVASPTHVVDDNVFVNLDAFDMLGDFPELEVLDPSSLSTNPVTMTLKVISFQSSCGKSPPAEDATEKMQTECSTEGALSITDYSPEWAYPEGGAKVLVAGPWTETSDQYTVLFDNFPVPSILVQNGLLRCYCPAHEAGLAALQVARAGRVVSDTVVFEYKAGPAPAPSSPASAPLPSLDFRRFTLLQRLQRLHGRLQVKSEPMDDNNQIEDVQLYSNPKFEERLVSFCRSLSLRSTGMSEGFTTEPGEDGSTILHLAAALGYTKLTTVLLRWKQDDNSLALEKEVNLGARDVDNCTPLMLASAAGHVETAVVLARWSAGTRCEAGARAAAAAARRSGHQQLAALLDRIHPPPKDAVFLRPHSHSLSQKGRAGSLESNLVKRPSIDSGINMADAFRSSSAIDKSDTSSARWERSMSLPLDSDTSEDSLGDAKIGRRMDLALCETAWRRPASPIIDVEALSSPSPPPSPERPKPQGEQDDRVFTLAEQIIAAMPERIKNESSSLLSGCGLEGSGGSGEDTLMVPLLDDTTTFNTEFSFEFCDNTYRLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358573; iTF_00007099;
- 90% Identity
- -
- 80% Identity
- -