Cmed090640.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- CDC5L
- Assembly
- GCA_014851415.1
- Location
- Chr8:4909214-4919750[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-17 3.2e-14 52.6 1.8 2 46 5 50 4 50 0.97 2 2 3.3e-12 3.7e-09 36.4 0.1 1 45 56 99 56 100 0.93
Sequence Information
- Coding Sequence
- ATGATCAAAGGCGGCGTTTGGCGCAACACCGAGGATGAAATCCTCAAAGCAGCGGTGATGAAATATGGGAAAAACCAATGGTCCCGTATTGCTTCACTATTGCACCGCAAATCGGCCAAGCAATGCAAGGCGCGGTGGTACGAGTGGCTCGACCCGAGCATCAAGAAGACGGAGTGGTCCCGCGAGGAGGACGAAAAGCTGCTGCACCTGGCCAAGCTGATGCCGACGCAGTGGAGGACCATTGCGCCCATCATCGGCCGCACGGCAGCGCAATGCTTGGAAAGATATGAATATTTACTGGATCAAGCTCAAAAGAAGGAGGAAGGAGAGGACATGGGGGATGACCCCCGAAAACTAAAACCTGGAGAGATTGATCCAAACCCTGAGACTAAACCAGCTAGACCTGACCCCAAAGATATGGATGAAGATGAACTGGAGATGCTGTCAGAAGCTCGTGCTCGTTTAGCAAACACTCAGGGCAAGAAAGCCAAGAGGAAGGCGCGAGAGAAGCAGCGTAAGAAAAAACGTGGAGTTGATTACAATTCGGAGATTCCATTTGAAAAGAGGCCATCTGCTGGGTTCTACGACACGTCCACAGAGGTGGTGGATCCCATGGCGCCGGACTTCAGTCGCCTGCGCCAACAACATCTCGATGGCGAGTTGCAATCAGAAAAGGAAGAGAGGGACAGGCGCAAGGACAAGCAGAAGCTGAAGCAGCGCAAGGAGAACGACATGCCTCAAGCCATGCTGCAGGGCGACCAGCCCGCGCGCAAGCGCAGCAAGCTGGTGCTGCCCGAGCCGCAGGTGTCCGACCAGGAGCTGCAACAAGTGGTGAAGCTAGGCCGCGCCTCGGAGGCGGCTCGCGAGTCGGCGGGCGAAGCCGGCGCCGCCACCGACGCGCTGCTGGCAGACTACGCGCTCACGCCCGCGCCGCAGCATGCCCCGCGCACGCCGCACACGCAGCAGGACAGGATCCTGATGGAGGCGCAGAACGTGATGGCGCTAACCCACGTGGACACGCCGCTGAAGGGCGGGCTGAACACGCCGCTGCAGCAGAGCGACTTCTCCGGCGCGCTGCCGCAGCCCAGCGCGCGCGCCACGCCCAACACCGTGCTGGCCACGCCCTTCCGGTCATCACGCAGCGAAGTTTCAACACCAGGAAGCTTCAACACGCCCAGCAACGCGCCGGGACAGCCAGGATTAACGACTCCTGGATTGCGTGACAAGTTGAGCATCAACCCAGAAGACAGATTAAGCGGAGGAGATACGCCACAGCTTGCAAATCAAATGCAGAAACAGCTGAAGGCGTCTGTGCGGTCGGCGCTGGCGTCGCTGCCGACGCCGCGCAACGACTACGAGATCGTGGTGCCCGACACGCCCGCCGCCGACGCGGCCGATGCCGCCGGTGTAACCGCCGCCGTCGAGGACCAGGCCGACGCCGACGCGCGGCTACTGCAGGAGCAGGAGGAGAAGAGGCTAGCGGCGCTGGCGCGTCGCTCGCAGGCCGTGCAGCGCGGCGCCGCGCGGCCCGGCGAGGTGAACGCTGGGGTAGTCCGCGCCGGCGCCGCCGCGCTGTCCACGCTGTCCGCGCTGCAGCAGGCCGAGGAGCTGCTCAAGGCCGAGATGGTCACCATGCTGCACTACGACGCGCTGCGCGACCCGCCGCCAGGTATAGACAAAAAGAGGATAGTGCAATCCCAAGCGGCGCACCTGGCGTACCTCGAGCAGCACCCGTACGAGGAGTTCTCGCCGGCGGAGCTGGACGCCGCCAAGCAGGAGATGCGGCGCGAGATGGAGGTGGTGCGCGCCGGCATGGGCCACGGCGACCTCAGCATGGACGCCTACACGCAAGTCTGGGAGGAGTGCCTGGCGCAGGTTCTTTTCTTACCTGGTCAAAACAGATATACCCGTGCGAATTTAGCCAGTAAAAAGGACAGATTAGAATCAGCTGAGAAGCGGTTAGAACAGAACAGAAACCACATGGCCAAGGAAGCTAAGAAGTGCTCAAAGATAGAAAAGAAGCTACGAGTACTTACAGGGGGTTACCAGAGTCGAGCAGCATCACTTATAAAACAGTTCCAGGAGTTACAAGACCAGATAGAACAGTCAAATCTAGAATTGTCCACGTTCAAGTTCTTGGCTGAACAAGAGAAGGCTGCCATTCCACGAAGGATAGAGTCATTGACAGAGGACGTAAATCGCCAAACGGATAGAGAAAAACAACTGCAAAAGAAATACAGTGAGCTGCAGGCTGAGTTAGAAGACATCCACAAAGGACGGCGGCCGGTGGAAGCCGAAGCCAAGAGTACAGAAGAGCAGCATTAG
- Protein Sequence
- MIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQRKKKRGVDYNSEIPFEKRPSAGFYDTSTEVVDPMAPDFSRLRQQHLDGELQSEKEERDRRKDKQKLKQRKENDMPQAMLQGDQPARKRSKLVLPEPQVSDQELQQVVKLGRASEAARESAGEAGAATDALLADYALTPAPQHAPRTPHTQQDRILMEAQNVMALTHVDTPLKGGLNTPLQQSDFSGALPQPSARATPNTVLATPFRSSRSEVSTPGSFNTPSNAPGQPGLTTPGLRDKLSINPEDRLSGGDTPQLANQMQKQLKASVRSALASLPTPRNDYEIVVPDTPAADAADAAGVTAAVEDQADADARLLQEQEEKRLAALARRSQAVQRGAARPGEVNAGVVRAGAAALSTLSALQQAEELLKAEMVTMLHYDALRDPPPGIDKKRIVQSQAAHLAYLEQHPYEEFSPAELDAAKQEMRREMEVVRAGMGHGDLSMDAYTQVWEECLAQVLFLPGQNRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKIEKKLRVLTGGYQSRAASLIKQFQELQDQIEQSNLELSTFKFLAEQEKAAIPRRIESLTEDVNRQTDREKQLQKKYSELQAELEDIHKGRRPVEAEAKSTEEQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282289;
- 90% Identity
- -
- 80% Identity
- -