Cmed138700.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Kdm5
- Assembly
- GCA_014851415.1
- Location
- Chr10:9489231-9491673[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-23 1.3e-19 70.2 0.1 3 89 94 176 92 176 0.93 2 2 5 1.6e+04 -3.9 0.0 60 83 742 761 741 762 0.70
Sequence Information
- Coding Sequence
- ATGGATAGTAAAAACATTCAGAAAAATGCGATGCAAAAAAGTGCAGAGTTCACTTTTAATCCACCACCGGAGGCTCCTGTATTCGAACCTACGCCCGAAGAGTTTTTGGATCCACTGGGGTACATCGCCAAGATTCGACCCGTCGCAGAATTAACGGGCATCTGCAAGATTAAACCACCAGCGCGATGGCAGCCACCGTTTTCGTTAGATGTTGATAAATTGAAATTCGTTCCACGAATACAGAAAGTGAACGAACTGGAAGCCATAACACGATTGAAGCTTTTGTTTCTTGAGAAAATTCTAAAGTTTTGGGATTTGCAAGGATCGCCGTTAAAAATACCTATGATTGAAAATAAAACATTAGACCTTTACTGTTTAAAGTTTTGGGTGGATGAAGAAGGAGGATTTGAAAATTGTAATAGTCCCAAAAAATGGCGTAAGATTGCTAACGCCATGGGTTACAGCCAAAACACGAACACAATGAATTTTCTTAGGGGTAATTATGAGAAAATTTTGCTTCCTTATGATATATTTGAAAAAAGTAAAGCTGATATACTGAAAACTGTTAAAAAGACTGAACCCAAAACTGAAATAAAAGATGATGGTGAGTGTGGGAAAGCATTATTCAAAGAAATTTCAATAGAGTCTATCACACAAATAAAATCTGAAACTGACATCAAGAGTGAAAAACCCCATGCAGGTTTTATAAAAAAGGCTAAGACAGGTTCAGACATTAGACCTGATGCAGACTGTAAAATGAGAATTGATGAAGAAATAAAACGTAATAGAGAATTAAGGCGGTTGGCTTGTTATGGACCAGGACCAAAAATGCCTGGGTTAAATGATGAGGAGTTTGACATCACAAAATGTAGGAAGAGGCCTAGATATGATTTGGATCCCTTAGCAATATATAAGGTGACTGGCGGTGTCCATGTTGCATTGCAGAAGAAGTTCATAAACCAGCTGAAGCATTTGGATTTGCTCAGGCAGAAAGAGAATATTCCCTTCAGCAATTTGGAGAAATGGCTGATAAATTTAAATCATGATTATTTTGGCACATCTGGTCATTTAGTGCCAACAACGGTTGCTGAGAAAGAATTTTGGAGAATCATATCATCAGTTGAAGAAGATGTTACAGTTGAGTATGGGGCTGATCTTCATTCTATGGACCATGGTTCAGGGTTTCCTACTAAGTCTTCCTTAAACCTATATCCAGGAGATCAAGAATATGTTGACTCAGGATGGAATTTAAACAATCTTCCTGTCTTAGATGGCTCTGTGTTGAGGTTTATTAATGCTGATATATCTGGAATGACAGTGCCCTGGATGTATGTTGGTATGTGCTTCTCTGCTTTCTGCTGGCACAATGAAGATCACTGGAGCTACTCCATTAATTACTTGCACTGGGGAGAAGCAAAGACTTGGTATGGTGTCCCAGGAAGTGGTGCAGAGTTATTAGAGAATGCTATGAAAGCAGCAGCACCTGATTTGTTCAAATCTCAACCAGACTTATTGCACCAGCTTGTAACAATAATGAATCCTAATATTCTTATGAATGCAGGAGTACCATTATATAGAACAGATCAAAATGCTGGGGAATTTGTTGTTACTTTCCCTAGAGCATATCATGCAGGTTTCAACCAAGGGTACAATTTTGCAGAAGCTGTTAACTTTGCTCCACCTGATTGGCTTAGAATTGGAAGAGAATGTATAATTCACTACAAGAATTTAAAAAGATTTTGTGTCTTCTCTCATGATGAACTCATTTGTAAGATGGCTCTAGAAGGTGATAGATTAGATTTAGAAACGGCTTTGGAGACTCAAAAAGAACTGGTTCGCGCTACTGAAGAAGAAGGTTCATTAAGAAAATCAATATCAACTCAAGGTCTGACTAAGTTGAAGAGAACTGCTTTTGAGCTGCTTGGAGATGACGAAAGATTGTGTGAAGTGTGTAAAACAACTTGCTTCCTATCTTCTGTATCATGCCCTGAATGTAAACACATGGCATGTTTGCAGCATGCTGCCAAATTTTGTCCATGCCCAATGGGAAACAAAGTATTGAACTTTCGTTATGATATGGATGAATTACTGATTATGTTGCAGACAATAGACTTCAGAGTTAACAGCTTTCATAAATGGATGGCTGATGCGAAAAATATTTTGCTTCCAACTGCTCCAGACATTGGAAGACTACAAAAATTAAAAGTATTGATAGATGAAGCAGATGAACTGAAGATACCAAAATCCAATATGCTGACACAGCTCAAAGAAGAGTATACAAAAGCAACAGAAAATGTGGAACCGATTGTTATAGAGCTAGATGATGATTGA
- Protein Sequence
- MDSKNIQKNAMQKSAEFTFNPPPEAPVFEPTPEEFLDPLGYIAKIRPVAELTGICKIKPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWDLQGSPLKIPMIENKTLDLYCLKFWVDEEGGFENCNSPKKWRKIANAMGYSQNTNTMNFLRGNYEKILLPYDIFEKSKADILKTVKKTEPKTEIKDDGECGKALFKEISIESITQIKSETDIKSEKPHAGFIKKAKTGSDIRPDADCKMRIDEEIKRNRELRRLACYGPGPKMPGLNDEEFDITKCRKRPRYDLDPLAIYKVTGGVHVALQKKFINQLKHLDLLRQKENIPFSNLEKWLINLNHDYFGTSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMNAGVPLYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLRIGRECIIHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVRATEEEGSLRKSISTQGLTKLKRTAFELLGDDERLCEVCKTTCFLSSVSCPECKHMACLQHAAKFCPCPMGNKVLNFRYDMDELLIMLQTIDFRVNSFHKWMADAKNILLPTAPDIGRLQKLKVLIDEADELKIPKSNMLTQLKEEYTKATENVEPIVIELDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487498;
- 90% Identity
- -
- 80% Identity
- -