Cmed043000.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cnaphalocrocis medinalis
Gene Symbol
Arid4b
Assembly
GCA_014851415.1
Location
Chr21:8730530-8747555[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-30 7.7e-27 93.4 0.1 1 89 280 366 280 366 0.96

Sequence Information

Coding Sequence
ATGCAGGGTGACGACCCTCCCTTCTTGCCTGTTGGTACTGATGTCAGTGCCAAATATAAAGGTGCCTTTTGTGAGGCTAAAATAAAGAAGGTGGTCCGCAATATCAAGTGCAAGGTAACTCTGAAAGCTGGAGGAGGTACTCTGACTGTGAATGATGATGTCATCAAGGGCACCCTCAGAGTAGGCAGTACTGTTGAGGTGAAACAGGACCCCAAGAAGGATGCAATGGAGGCTGTTATCACCAAGATACAAGACTGCAGCCAGTATACAGTTGTGTTTGACGACGGCGACATAACGACGTTGCGGCGGTCGGCGCTGTGTCTCAAAAGTGGGCGGCATTTCAACGAGAGCGAGACGCTAGATCAGCTGCCTCTCACGCATCCAGAGCACTTCTCCACGCCCGTCATAGCGGGCCGCCGCGGCCGCAGGGGGAGGGCTCAATCGGACGAGAGCGAGGGCGAAGGCCCCGCGCGGCGCGTGAAGGCGGACTCGGAGCCGCACGTGGGGCGCGTGGTGCTGGTGGAGGCGGCGGGCGGGGCGGAGCGCCGGCGCCCGCACCAGCCCGCCTTCCCCGCGCTCGTGGTGGCGCCCACCGCGCAGATCAAGGTCAAGGAAGACTACTTGGTGCGCTCTTTCAAGGATGGCAGATACTACACGGTCCCGAAGAAGGAGGCCCGCGAGTTCCGCAAGGGCAGCGCGCCGCTGGAGTGGGCGGGCGTGGAGGCGGCGCTGCAGTACCTCAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGACGCGCTCTTCAACGAGCCGAGGAACACCTCCGACGATAGTTCGGATGACGAGCCCCGTGAAGAAAAGGACCACTTTGTAGCACAACTGTACAAGTTCATGGATGACCGCGGGACGCCGCTCAACAGGAACCCCACCATAGCCAACAGAGATATTGACCTGTATAGATTGTTTAGAGTGGTCCAAAAACTTGGAGGATACAACAGGGTGACCAATCAAAACCAATGGAAGACGATTGCCGATAAGATGGGCTTCCATCCAGTCACTACGAGTATCACTAATCTCTGCAAGCAGGCTTATAAAAAGTTCCTGCACAGCTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGCTGGTGGCGCACCCGCGCGGCGCGCGCACGCCGCCCGCCGGCCGCTCGCTCATACGCGACAAGGACAAGCTGCCGCCCGCCGCCGCCTCCCCCGCGCCCGCCGCCGCCCCCGCCGGGGCCCCCGCGCAGCAACGCGGCAAAGATAAAGACTCTGATAAGAGTGAGACAGAAAAAAGTGATAAAAGCGAGAAAGAAGAAAGAATAGAGAAGGTGGAGAAAGAGAAACCTCAAAGAGAAAAGGAAAAGCCGCGAGCGAGCGACGGTGAAGACAGTGCAGACAACCAGCCGCTGATCACAACCACACCCAAAATCGAAAAGGACAAGGACAAAGAAAAAGAAAAGGACAAAGAGAAGGAGAAGGAAAAAGAGAAAGAAAAGGAGAAAGAGAAGGAGAAGGAAAAGGAGAAAGACAAAGAGAAGGAGAAAGAAAAGGAAAAAGAGAAGGAGAAGGAAAAGGAGAAAGATAAGGAGAGGGATAAGAGCTCGACTACTAGTGAAGAGAAGGTGAGCGTGATCAAACCGCGCTCGCAGTCCAAGACGCGCAGCATGATCCCCGTCAAGACGGACTCGCACGAGAAGCGGACGCCGAAGAGGAGGCCCCTGTCCTCCAAAAGTGAGGCGAGCTCGAGCGCATCGCGAGCGTCGCGCCGCCCCCACGTGTCCACCGACAGCGATAGCTCCGGGCGTGCTTCCAGCAGATGCGGTCCAACAAAGAAGATGCAGGTTCGTCGCAGCCAGAGCGCCAACTCGGCGAGCAGCGGCAACACCATCGTGTCAAACAGCAGCAAGCGCCCGCGGAAGAGAAAGAATACCGAGCCTTCAAATGAACCCACGCGCTCTGGCGGGACTAACGTGAAAGCGCAAGTAGGAGATAAATTGAAAGTTTACTATGGACCGACGCAGTCAGAATCAAAGGTGACGTACGAGGCGAAGGTGATCGAGGTGTCGGCGGAGGGCACGCTGCGGGTGCACTACACGGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAGCGCATCGCGCTCAACGTCACGCACCACGAGCAGCGCAACAAGAAGAATACAAGCATTAGCAGGCGAGTGAGGTCTAAAAGAACAGAAGAGTCCTCGGCGCGGTCTGATTCCGATAGCGACTCCGACAGCGATCGCTCCGTCAAACGACCGCCCAAAAAACTTGACGACAAAGGCAGTTCAAAATCTCCATCACGGTCGAAAGACGCAAAATCGAGCGACAGCAGCAGCTCGAGCAAACCTCGCAAGAGGCCGATGCGGACCATCTCCACGCCCACGGCCGTGTCCCCCGCCAAGAAGCCGCGGCCCGCGCAGCCCGGCCACCAGGGCCGCGACTACGACCTCAACGAGATCCGCTCCGAGCTCAAGGGGCTGCACACCCCTGACAAACAACCAGAGGACGTTTACGAGTTCAAGGAGCCCGAACCGTTTGAACTGGAACTGCACGACGAGAAGAAGAAGCGAACGCACCGAATATTCGATGACATCTCCCCCAGCAAGTACACCTCGACGCTTTCTAAATCGCTGAGCGAGGAGATATCCGAGGACCCCCTGCGGCCGCGCCCCTCCTCGCTCCGGTCGCCGTCCTTGTCCCCGTTCCGAGACTTTGGCTCGACGCGCGACGCGCCGGGCCGGCAGAGCCCCGAGGAGGACTCCAAGGATGGACTCTTCTCTTTGGACGACGACTCTTTCCCCGGTGATGGCAGTTCCGGCCCTATTTTCGAAGGTTTCACTCCAGCTAAAAACCAGGAAACGTACTCAAAGAAGAGCAAAGTTTCGAAATTGAGAGAGCTAATAGATGACTCCCCGGACAGCCCCGCTGACGACGAGCAGTCGTCGGATGATTCCGACGATATACCTATGAAGGAGGAGGAGGAGGAGAGAGAACCCAGCCCAGTTGTACCCAAAGTAGAACCTCCCAAAACTCCGGAGGTACCCGAAGTGCAACCAGAGGTCAAGGAACCCGAACCAGAACCTGTAAAACAAGAAAAGAAAGAAGTAGTTGAGCCTGTAGAGGAAGTGAAAGAAATCATTCCTGAGCCACCAAAAACTCCGCCTCCGAAGAAGTTGGAACTGCCCACCGCCGAGCCTAAGGAGAATGTTCTTAAAGTGAAAATCGAAAAGAAGCCGCTTGAACCGGAACCAATAGTTGCTAAACTTGAGCCACCTTCGAGTCCTCTGATAGACACAGAGGAAGACAAATCTGAGCCCGATAGTCCCGCGCGACTCGACGTGCTTCCCGAGCCGCCTCCTGGCTTCCTCCTACAATCGGAGGGTCCCAAAATAGCCGAGAAGCTGCTCAAAGCTATCAATAGTGCTAAAAGATTATCCATGTCCCCGCCTCCGGTCGAAGACAGGCCGCTCACGCCAAAAGACGTACTGAAATTCCCAAAACCAGATGGCAAAATATCTCCCATCGCGCCCGAAGTGAAAACTACCACGAGCAAAACGGAACCACTAAAACCGTTGCCTAAAGTAGAGCCTATCAAAAAGTTCAGCGCTGAGTTAACTGATTCAATATTTGGAGAGCCGTCTAATTTGATAGATGTAAAACGTGACCTAGCGGAAATAAAGAAAGTGAAGCCAAAAGAACCCACTCCTCCGAGATTGCAAAGTCCTTTGAGTATCTTGGAGCGACGGAAGAGTGTGTGTGACCTGCCTCTAGGAAACCCCGGTAAAAACAACAAGGTGTTGAGTGACACAATACAAAAGTTGTCGAGCCAGATAAACCAGTCGGCCGCGACGGTCGCCGCTAACATTCCTCTGCCACCGTTTCCGCATGAAGATAGAAGCGATTCCAGTGACTCCGACGATTCGGATAGAAGGTTAATAATCGACAAGCTGTCGCTGGAGGAGTGGGGCAGCGGCAGCTCGGAGGCGTCGCGCGGCGTGGCGGCGCCGCCCGCGCTGGCGGCCGTGGCGCGCACGTCGCTGCACGCCGGCAAGTCGCCCGGCGAGTGGAGCGCCGGCGAGTCGCTGCTCATGCTCGAGGACGCGTGCAAGAACGAGAGGAAGCACAGTGCGAGCGTAGTCGTGGCAGGCAGCGGGCGCGTCAGCTCCGCCGCGGCGGCGGCGGCGGCGGCGAGCCCCGTCGCGGCGGGAGCGAGCGCGGTGCCGGCGGAGGAGGACAGCAACATCTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACAGCGAGCCCGCGCCGCCGCGCCAGCGGCTGCACATGCCCTTCGCATGCGCCCCGCCGCACCAGTCCAGCTCCAAAGACGAGGCGAGAGTGGGTCATCTAGGCGCGCGGCCGGCGGCCGGAGCGGGGGCGGGGGCGGCCGGGGGCGGGCGGGGCGGCGCCGGGGCGGGCGGTGGTGGCGCGGGGGCGGAGGGCGCGGGGGCGGCGGGCTGGGCGCGGCGCCAGGCGCTGCTGGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGATATGTCGCCGCACAGAGAACGACGAATGTCAGAACGTGATAGTCCGTCGGAAAGGAAAGAAGACGAAGACGACAGTCGACCTAATAACAATTCTCCTCTCGATATGGATAAAGCACATGGCTGCCGCTCGCGCAAGGCGTCGGAGAGCTCGGTGGGCGCGGGCGCGAGCGGCGCGGGCGGCCGCACGCGCGCCCGGCGCTCGCGCCGCGACACCGACGACCACTCCAACTCGCACCACCCCCCGCTCAAGTACAACTTCTATGTCGAACTCGATCCATCGTGGGACTGTCAGACTCGCATCAACGTGTTGACGTCGCGGCTCGCAGACCTGCGCAAAGCATACCACTCGGTCAAGGCGGAGCTCGCCGCCATCGACCGCCGCCGGAAGAAGCTTCGACGGAAGGAGAGGGAGGCTGTGAAAGCTGCAAAGGCGGCGTGCTCATGA
Protein Sequence
MQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTLTVNDDVIKGTLRVGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDESEGEGPARRVKADSEPHVGRVVLVEAAGGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNNGVLPPHWDRDALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDKDKLPPAAASPAPAAAPAGAPAQQRGKDKDSDKSETEKSDKSEKEERIEKVEKEKPQREKEKPRASDGEDSADNQPLITTTPKIEKDKDKEKEKDKEKEKEKEKEKEKEKEKEKEKDKEKEKEKEKEKEKEKEKDKERDKSSTTSEEKVSVIKPRSQSKTRSMIPVKTDSHEKRTPKRRPLSSKSEASSSASRASRRPHVSTDSDSSGRASSRCGPTKKMQVRRSQSANSASSGNTIVSNSSKRPRKRKNTEPSNEPTRSGGTNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEVSAEGTLRVHYTGWNTRYDEWIKPQRIALNVTHHEQRNKKNTSISRRVRSKRTEESSARSDSDSDSDSDRSVKRPPKKLDDKGSSKSPSRSKDAKSSDSSSSSKPRKRPMRTISTPTAVSPAKKPRPAQPGHQGRDYDLNEIRSELKGLHTPDKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSSLRSPSLSPFRDFGSTRDAPGRQSPEEDSKDGLFSLDDDSFPGDGSSGPIFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSDDSDDIPMKEEEEEREPSPVVPKVEPPKTPEVPEVQPEVKEPEPEPVKQEKKEVVEPVEEVKEIIPEPPKTPPPKKLELPTAEPKENVLKVKIEKKPLEPEPIVAKLEPPSSPLIDTEEDKSEPDSPARLDVLPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPVEDRPLTPKDVLKFPKPDGKISPIAPEVKTTTSKTEPLKPLPKVEPIKKFSAELTDSIFGEPSNLIDVKRDLAEIKKVKPKEPTPPRLQSPLSILERRKSVCDLPLGNPGKNNKVLSDTIQKLSSQINQSAATVAANIPLPPFPHEDRSDSSDSDDSDRRLIIDKLSLEEWGSGSSEASRGVAAPPALAAVARTSLHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVSSAAAAAAAASPVAAGASAVPAEEDSNISLLLCEETIPGSPAPDSEPAPPRQRLHMPFACAPPHQSSSKDEARVGHLGARPAAGAGAGAAGGGRGGAGAGGGGAGAEGAGAAGWARRQALLDNTPPTTPDSSLDMSPHRERRMSERDSPSERKEDEDDSRPNNNSPLDMDKAHGCRSRKASESSVGAGASGAGGRTRARRSRRDTDDHSNSHHPPLKYNFYVELDPSWDCQTRINVLTSRLADLRKAYHSVKAELAAIDRRRKKLRRKEREAVKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00075238;
90% Identity
-
80% Identity
-