Cmed137980.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- -
- Assembly
- GCA_014851415.1
- Location
- Chr14:1826094-1826735[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-09 4.3e-06 26.5 6.4 2 47 153 198 152 201 0.92
Sequence Information
- Coding Sequence
- ATGGCCCTGTGGACGCCGTACGTGCAGGAGGCCGCTCTGGACCTGAGCCGCTCCACCGTCAAGAGAGAGCGGGAATCGCCGAATATTCTACCAGTGACCGCTTCTTACAACGAATACGTGTATCGCCAGTACGCGACCTCCCCGCAGCCGAGCCTACCCGTCAACACGCAGTACTACACAGGATACACGGAGCAAACCTTCAGTGTTCCATCAGCTCAAATCTCACCGGAGTCCGTTGGCAGATGGTCTCCGCTCACATACAGACAGAAGACGATCAGCTCAGCCCCGTCGCCGCCTCACTCGCCTGAGTTATACGATATCGAGTCTTTGGACGATGACGTAGAGTACCAGGCTTTCGAGCGAGACGCTCTAAGAGCTATGGCCGAGAAAAATGGAGGTTCGCTGCTTGGGAATAATCCTCGGATGCGCAGAGCAGTTCAGACGAACCAGGCCGCTGACGACTCGTACAGGAAGCAAAGGGAAAGGAACAACTACGCCGCCAAGCAGAGCAGGGATAGAAGGAAGCTGAGGGAAGTACGCCTGGCTTTCCAGGTCACGTTTCTGAAGAAGAAAATGGCTGACTTGAGGGCAAGACTTGCTGCGGGAATCTGCGGGCGTTGCCAACAGATTTGTGAGTGCTGA
- Protein Sequence
- MALWTPYVQEAALDLSRSTVKRERESPNILPVTASYNEYVYRQYATSPQPSLPVNTQYYTGYTEQTFSVPSAQISPESVGRWSPLTYRQKTISSAPSPPHSPELYDIESLDDDVEYQAFERDALRAMAEKNGGSLLGNNPRMRRAVQTNQAADDSYRKQRERNNYAAKQSRDRRKLREVRLAFQVTFLKKKMADLRARLAAGICGRCQQICEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071392;
- 90% Identity
- -
- 80% Identity
- -