Cmed107570.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Atf6
- Assembly
- GCA_014851415.1
- Location
- Chr4:13896228-13916490[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-13 2.2e-10 40.2 13.1 2 56 333 387 332 394 0.94 2 2 0.069 54 3.7 0.7 22 55 813 848 812 850 0.80
Sequence Information
- Coding Sequence
- ATGGATGAGGATTTGCTAATAGAAAGCAAGGGCTACCTGTACGGTGATGATTTTCTAGATGAACTCACTAAAGAGTACCAATGGTCATCCCTGCTAGATGCAGCGGATGCTTCGCCGAGTGAGATTCTAGCAGATGCAGCACCAGTACTGGTGCCTCCAATATCACCCATCCTCAGTGTCAAGTCTTGTCCCACTGAAAGCAGTAATTCAGATTCAGGCAGTGAAGATGACTCCAAAAATGGGTCCAGTTGTACATCTGCTAGGCAATCATCGCAGTCGCCATATGATTGGCTGTCGAACTTGGAAGATGAGGGCTCAAATAACCTGAAGCTGGAGGATGTGGAACTGTTCCTGCAAAAAAGTGCCCCTATTATTTCACCTTCTCCATCTCCACCGAGAAATGTTACACCTCCTGAAAGAACGGGGCCAGTGATGGCCATAGAAAATGGCGTCATTACGGGTGTTAAAACAGAAATAAATGACAGTGACTTACAGGAGTCAGTTTGTTCACCTCTACAACATAATTTATTAAATGGAAATGGGTACTTACCAAATGGTTATTTTAAAGTGGTCAATGAAAACATTTGCCTTGCTATCCAAAAGGATGATAAGCAAACAATTCTGAATGATCAAATTAAGTTGGTTGTGGAGCAAAAGAAAATTCCTAGTATATTGAAAAGGCCAAACTTGTTGGTTAAGTCGAAGCCGGCTGCTGTTGTGATACCTGCAGAGAGTACAAAAGGAGGGAGGATTGCCATATCGCCTCTGCTACAAACTAACTTCAATGGCACAAACCATAATAATGGCTATCCAGTCAAGCTTTCTCCCCCTAGAAATGGTATAGTGTTAAGTCCAAAGCCGATTGTAACTCATAGCACTAATGTGACTGCGACCACGCAAGTAGTCCACAACGTGATCGCGTCGTCACCAGAGCCCGAGCTGCCGAGTAGCCCTCCCGACGTGGATCTATCGCACCTGAGTGAAGCTGAGATAAAGGCTATCAAGAAACAACAGAGGATGATCAAGAACAGAGAATCGGCTTGTCAGTCGCGGCAAAAGAAGAAAGAGTATGTAACAGCCTTGGAGCAGCAGTTGTTAGAAGCCCATCAGGAAATCGCCAGGCTTCGGCTGGAAAATAAACTGCTGAGGGATCAGTGCGACACCAATGGGAGGTCACGAAAAATACCAAGGCTAGATGGCTCACTTCTAATACCTAAAAAGAACATAGCAGTCCTCTTTGCAATGGTATTTATGGTGTCCTTGAACTGGAACGTTCTAGGGTGGAACTCGAAACCGTTTGTGGGGCATAATACCCCGCAACATGGGACGAGGCATCTACTCTGGTCGGAAGATAACGCTGATGTTGATAATGTATTGCCTGACACTGCCCAAATTGACAATAGTACTTACGGAATAGATTGTAAGAACACAACTGTGAAGGCCAACGAATACGCACACATAAACCAGACTGAGAGCATCAGGATAGCTGGCGAGCTCAACCGATGGATCGGCGGCGGGAAGACCCTCAATTGGACTTACGATGCGCCGAGAAGAAAACGAAAAGTCTATCTGAATGAAGAAAAGATTAACGGTGGATTCCTAGAAACTTACAAAATGTTTAACAGGTTGAATGAAGATAACCTTGTTGAATTCCCTAGTACAAAAAGTCACTCAAGAAACCTGAGGGAAAGATCACGATTACGTAGATTAAGAAGGAAAGAGTTGGACTTCGGAGACAGTGCTGTGATAGACTACGAAACGCTCAAGCCTAGACGTAAACCTGTTGATTTCGATATGGACGATCTGAGCCAATGGACTGATCTGCTACAGGCTTTAAAGAGGCGGGATGATACGTTTTATGTTGTTGGAGTAGGAAAAGGCGAACATCTTTTGCTACCAGCAGTATCGCACAACGTCACAAGGCCCCCTAGGATGGCATTGATTCTGCCTGCAAGATCAGGAAATGATTCTCTACTAGATCACGTGACTCTAATGCAGATCGACTGTTCTGTCGTCAACACTACGCTGGTCAAGCTCAAGTCGGAATCACTACCTGAAAGTCTGAGGAAGAAATTCGACGACGATAAGTCCGCCGTGTTACACACTGCAGAGAACAAAAGAAACAATATAAAGAGAAGTATTGAGGCGTCTCTCGATACCAAGTTATCAGATTCTCTAAAGAACTCTAGTAACAATTTACCCAATTATCCAGCGAATAAAAAGCAGCTACCATCGAGAGATGGCGATATATCCAAAGACGACTCATTTGCTCAGTATTTGTTTTCTAAATATGAAGAATCGAAACAAGACACAGACAAAAATCCATACCCTACCCATACTGTACTGTCCTCTATTGAGAACACCAAGATTTTAAGGAATGTGGGAAATAGTGGCAAGGAAAATAACTTCTTTATTAAGCGTGACAATCTTAGCAAAAGATATCCTGAAAACATTAATTCCCTGCAAAGTCAGTTGAACAGATTAAGTCTGCAAAAAGAGAATGATCCTTTGGGCAAGAAAGCAGAATTAATGAGAATGGCTGTTGAGAATAAGCCAGTTGTGAACATTCAACCAAAGGCTATTCAGCAACCAGTTGTTCCAGCACCTTCCATCCCGGATGAGTGTGTCATGACCAGTTTTGAAATGGTGAGAACCTCAACAGTTATCAACAAAGAGATAGTGACACAGACAAATGAGAATGCACAGATACAGTGCAATAGATCCCAAATTAGCATCAAGGAAGTTGTGTCAAAGTCTCATCCGGGGACTTTGAATTTCCTGGATGGGATTATACCACAGAGGCATTCCCCTTCTGAGTACACAGAAGAAAGCACACAGAATAGAATTTACCGTGACACCAAGCAACAGACTGAGAATATGAATGATGACAAGACACTGAATGAACTAAGCCTGTATAATGTTCAAGTGGACAATGCAACTACACCCCTTATATCTCCTGAACAAAGTTTATACTTAGATGTGAGAGATTATAGCGACTCAGATACAGGCAGTGATGACCAGTCCAATGTTGGATGGACTTATTATAATAAAGTTATGACTCATGTGAATGGAGTGCTGCAAGATTCTGATATGCCTTCTTCTGCCAGTGCACTCTTCAGGAACACCAAGCAGCAGTGTGTCCAGATGCAAATTGACAAAACTAATGTCAGTGTGACCAAAAGAGTGAAATTTGGCGACGATCCACTAGGCCTCCACCAGCCGCACATATACGCACCTGCGTCGGACACCAGCTTCAAAATGAATCAACTAGCCGCTAAGTACCTGAACAGAGGCGCCTTTTCCCCGGCACCACTTCAACTTCCAGTACCCAAGCCCTCTACAATGCCCATAGAAATGTCTTTTGCTACAAGGAACTATATGGAGAGACATAGAATTATACAAGGTACCGCAACTCCACGATCGCCACCACCAGGTGAGATTCCAAGATTTCTTGACATAACGGCGTTAAAACAACAACCAAAGTTATTATAG
- Protein Sequence
- MDEDLLIESKGYLYGDDFLDELTKEYQWSSLLDAADASPSEILADAAPVLVPPISPILSVKSCPTESSNSDSGSEDDSKNGSSCTSARQSSQSPYDWLSNLEDEGSNNLKLEDVELFLQKSAPIISPSPSPPRNVTPPERTGPVMAIENGVITGVKTEINDSDLQESVCSPLQHNLLNGNGYLPNGYFKVVNENICLAIQKDDKQTILNDQIKLVVEQKKIPSILKRPNLLVKSKPAAVVIPAESTKGGRIAISPLLQTNFNGTNHNNGYPVKLSPPRNGIVLSPKPIVTHSTNVTATTQVVHNVIASSPEPELPSSPPDVDLSHLSEAEIKAIKKQQRMIKNRESACQSRQKKKEYVTALEQQLLEAHQEIARLRLENKLLRDQCDTNGRSRKIPRLDGSLLIPKKNIAVLFAMVFMVSLNWNVLGWNSKPFVGHNTPQHGTRHLLWSEDNADVDNVLPDTAQIDNSTYGIDCKNTTVKANEYAHINQTESIRIAGELNRWIGGGKTLNWTYDAPRRKRKVYLNEEKINGGFLETYKMFNRLNEDNLVEFPSTKSHSRNLRERSRLRRLRRKELDFGDSAVIDYETLKPRRKPVDFDMDDLSQWTDLLQALKRRDDTFYVVGVGKGEHLLLPAVSHNVTRPPRMALILPARSGNDSLLDHVTLMQIDCSVVNTTLVKLKSESLPESLRKKFDDDKSAVLHTAENKRNNIKRSIEASLDTKLSDSLKNSSNNLPNYPANKKQLPSRDGDISKDDSFAQYLFSKYEESKQDTDKNPYPTHTVLSSIENTKILRNVGNSGKENNFFIKRDNLSKRYPENINSLQSQLNRLSLQKENDPLGKKAELMRMAVENKPVVNIQPKAIQQPVVPAPSIPDECVMTSFEMVRTSTVINKEIVTQTNENAQIQCNRSQISIKEVVSKSHPGTLNFLDGIIPQRHSPSEYTEESTQNRIYRDTKQQTENMNDDKTLNELSLYNVQVDNATTPLISPEQSLYLDVRDYSDSDTGSDDQSNVGWTYYNKVMTHVNGVLQDSDMPSSASALFRNTKQQCVQMQIDKTNVSVTKRVKFGDDPLGLHQPHIYAPASDTSFKMNQLAAKYLNRGAFSPAPLQLPVPKPSTMPIEMSFATRNYMERHRIIQGTATPRSPPPGEIPRFLDITALKQQPKLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -