Cmed055970.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- cnc
- Assembly
- GCA_014851415.1
- Location
- ctg10334:10123-24802[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-13 1.9e-10 40.4 10.5 3 64 111 172 109 177 0.93
Sequence Information
- Coding Sequence
- AATGGTGTAGCCAGCCCCCCCGGCGCGGGCGCACGCTACGCGTACGGCGCGGAGCGAGTGAGACACAACCACACCTACAGCGCGCCGCAGCCTCTCGCTCACGCCAGGGCTCATCTACACCGAGATAAAAGAGTGCGGCGGGTGACCGATGGGAGCATGTCGGATGGCGGGTCCTCGGCGGCCAGCGGCGGCCAGCACCTCAGTAGAGACGAAAAGAGGGCTAAGGCTCTTGGCATACCCCTGGACGTGCAAGACATCATCAACCTCCCAATGGATGAGTTTAACGAGCGGCTATCCAAGCATGATCTCAGCGAGGCCCAGCTCTCGCTCATACGGGACATACGGCGCCGGGGGAAGAACAAGGTGGCAGCACAGAACTGTCGCAAACGCAAACTGGATCAGATCACATCCCTGGCGGACGAGGTGCGCACTATGCGCGACCGCAAGCAGCGGACGCAGCGCGACCACCACCAGCTCACGGCCGAGAGACAGCGCGTGAAGGAGCGGTTCGCAGCGCTCTACAGACACGTGTTCCAGCTTACGGAGGCATACATAAAACTCATGGATACCTCAGGCGTCTGCTGTTCACTTGGTGTGTCCCGGCAAGTGCTCGAAGATTTTGTTCCGCAGGAACAGTGTACAGACGAAGAGACGCAGATATGTGTCAAGGACGAGCCGCCAGAAGTTAAACAGGAGTTTGAGATAGAAATTGAGGGCATAGGACTTTATGGTAGCGGATATTCAGCAACCGTGGAAACGGGTAGGACTACTCCAAAACAATGTACAGTGGCGGACACGCTAGAACAACCTGATGAAACCAGCTTCACTGATATTAATATTAAACAAGAAAGTGGATACACCCCTGATGTGGACATGGCAGATGATAATATATTGCTACATTGCGCTCGAAATAGTGAAATATCAAACGAAGACTTCTTAAACGATAGCAGTATAGAAGAATCAGCAGAAAACAATTTAATCAGACACATGCTAATACATACCGAAATAAAACCGCATCGATGCA
- Protein Sequence
- NGVASPPGAGARYAYGAERVRHNHTYSAPQPLAHARAHLHRDKRVRRVTDGSMSDGGSSAASGGQHLSRDEKRAKALGIPLDVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTMRDRKQRTQRDHHQLTAERQRVKERFAALYRHVFQLTEAYIKLMDTSGVCCSLGVSRQVLEDFVPQEQCTDEETQICVKDEPPEVKQEFEIEIEGIGLYGSGYSATVETGRTTPKQCTVADTLEQPDETSFTDINIKQESGYTPDVDMADDNILLHCARNSEISNEDFLNDSSIEESAENNLIRHMLIHTEIKPHRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -