Cmed090150.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- cnc_1
- Assembly
- GCA_014851415.1
- Location
- Chr6:3822567-3837141[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-14 5.2e-11 42.2 9.4 3 64 131 192 129 195 0.94
Sequence Information
- Coding Sequence
- ATGCCCCCTGCGCTGGATCTCAACGCGGCCACCGCGCACTCCAGCATCGCATTGCTCCAGAACGGTGTAGCCAGCCCCCCCGGCGCGGGCGCACGCTACGCGTACGGCGCGGAGCGAGTGAGACACAACCACACCTACAGCGCGCCGCAGCCTCTCGCTCACGCCAGGCCTCACCTACACCGAGATAAAAGAGTGCGGCGGGTGACCGATGGGAGCATGTCGGACGGCGGGTCCTCGGCGGCCAGCGGAGGACAGCACCTCAGTCGAGACGAGAAGAGGGCGAAGGCTCTCGGCATACCCCTGGACGTGCAAGACATCATCAACCTCCCAATGGATGAGTTTAACGAGCGACTCTCCAAGCATGATCTCAGCGAGGCCCAGCTCTCGCTCATACGGGACATACGGCGCCGGGGGAAGAACAAGGTGGCAGCACAGAACTGTCGCAAACGCAAGCTGGATCAGATCACATCCCTGGCGGACGAGGTGCGCACTATGCGCGACCGCAAGCAGCGGACGCAGCGCGACCACCACCAGCTCACGGCCGAGAGACAGCGCGTGAAGGAGCGGTTCGCAGCGCTGTACAGACACGTGTTCCAGAACCTGCGCGACCCCGAAGGGCGCCCGCTGTCCTCGACGCAGTACTCGCTGCAGCAGGCCGCCGACGGGAACGTGGTCCTGGTGCCCAAGATGCCCCACCACACCGATCACGCAATGAACCGCACCTCAGACGACGAGATGGACAGGAAACCGAAGAACTATGAACAGTGA
- Protein Sequence
- MPPALDLNAATAHSSIALLQNGVASPPGAGARYAYGAERVRHNHTYSAPQPLAHARPHLHRDKRVRRVTDGSMSDGGSSAASGGQHLSRDEKRAKALGIPLDVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTMRDRKQRTQRDHHQLTAERQRVKERFAALYRHVFQNLRDPEGRPLSSTQYSLQQAADGNVVLVPKMPHHTDHAMNRTSDDEMDRKPKNYEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -