Cmed093230.1
Basic Information
- Insect
- Cnaphalocrocis medinalis
- Gene Symbol
- Jra
- Assembly
- GCA_014851415.1
- Location
- Chr18:12455782-12456516[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-16 1e-13 50.9 12.9 2 65 170 233 169 233 0.96
Sequence Information
- Coding Sequence
- ATGGTTCGGCACTCCGGCCACGGCATGGAGACTACTATGTACGATGAACATTACCTTCCCCTCAGCGGACCCGTGGAAAACCTGAAGCGGACCCTCACCCTGGACCTGGGTGACCTGCGAGGAGGCAAGCGAGCCCGCCTCGGGAACGCGCCCGTGCTGTCCTCGCCCGACCTGCACATGCTGAAGCTCGGCTCCCCCGAGCTGGAGAAGCTGATAATCCAAAACGGAATGATCACGTCGGCGACGCCCACCCCTGGCGCCTCCAGCTTGTTCCCTCCGGTCGTGGCTCCTACTAAAGAGCAGGAATTGTACGCGTTGCCGTTCGAGGAGGCGCTGGACAAGCTGCACCACGGCGAGCCGGCCGCGCCGCTCGGCAGGCGAGTGTACGCCGACCTCGACAGGCCGCTCGAGCGCTACCCCACGCCGGTCGTCAAGGACGAGCCCCAGACCGTCCCCAGCGCCGCCAGCTCACCCCCCCTCTCACCCATAGACATGGACACGCAGGAAAGAATCAAATTGGAACGGAAGAGACAGAGGAATCGAGTGGCCGCCTCCAAATGCAGGCGGCGGAAGCTCGAGCGTATCTCTAAGTTGGAGGAGAAGGTGAAGGTCCTGAAGGGCGAGAATGTGGAACTAGCACAGATGATCGTGAAGCTGAAGGACCACGTGCACCGGCTCAAGCAGCAAGTGCTGGAGCACGCGAACGGCGGCTGCCTCATCGACTCGCAGTTCTGA
- Protein Sequence
- MVRHSGHGMETTMYDEHYLPLSGPVENLKRTLTLDLGDLRGGKRARLGNAPVLSSPDLHMLKLGSPELEKLIIQNGMITSATPTPGASSLFPPVVAPTKEQELYALPFEEALDKLHHGEPAAPLGRRVYADLDRPLERYPTPVVKDEPQTVPSAASSPPLSPIDMDTQERIKLERKRQRNRVAASKCRRRKLERISKLEEKVKVLKGENVELAQMIVKLKDHVHRLKQQVLEHANGGCLIDSQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00801544;
- 90% Identity
- iTF_00364650;
- 80% Identity
- -