Cmar015865.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- gatad1
- Assembly
- GCA_900005825.1
- Location
- CVRI01000063.1:1642733-1644162[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 3.7e-06 26.7 1.3 1 29 5 32 5 37 0.89 2 2 4.1 1.5e+04 -4.1 1.0 4 10 111 117 111 118 0.83
Sequence Information
- Coding Sequence
- ATGAATccaaaatgctttcaatgtgAGAAAACTGAATCAATATTATGGAGGAAAAATTCTGAGAACGCGGAAATTTGTAATGACTGCTACGAAAGTGAAAAATCTGATCAAATTTTAGAAAAACCAACTCCATCAACTGAGACAGTGGACAAGGAACCGCCAAAAGACCTTAATGTTAAGGAAACTAATGTTGTGGAAGCAAAAGTAAGAAAGAGCACTAGATCCACGAGATTTAAGAATAAATCCAACGCAAGGCAAAAGTCAAAAGTAACATCACGACGTTCCAACACTTTTAAAAGCAGCCGTCCAATTAAAACACCAGCAAATATTTGTGCAGAAACCAAAACTAAGACTCATGTGTTTCATGATGGTTTCTATTATCAAGTTGGAGATATTGTCTCATTAATGagcaaaggaaagaaatattacGCTCAGATTCGTTCGCTCATCGTTGATACATTTTGTGAAAAATCTGCAGTACTTACATGGCTTGTTCCGACAACTTCGTCTCCAGATCCAAACGAAGAGTTTGACCCATCGACTTATCTTGTTGGATATGAAGAAGACATACCACGAAGAATTGCAAATACCATGGAATTCATAATGAACGCTCCCAgtacatatttttataatcGCACTGAACCTTACTCCAAACCAGAAGAGCTCGCTGATGGACTTTACTCGGATAAAAAAGGATTCGTGTGGACAagcattaattaa
- Protein Sequence
- MNPKCFQCEKTESILWRKNSENAEICNDCYESEKSDQILEKPTPSTETVDKEPPKDLNVKETNVVEAKVRKSTRSTRFKNKSNARQKSKVTSRRSNTFKSSRPIKTPANICAETKTKTHVFHDGFYYQVGDIVSLMSKGKKYYAQIRSLIVDTFCEKSAVLTWLVPTTSSPDPNEEFDPSTYLVGYEEDIPRRIANTMEFIMNAPSTYFYNRTEPYSKPEELADGLYSDKKGFVWTSIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -