Cmar020360.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- pnr_2
- Assembly
- GCA_900005825.1
- Location
- CVRI01000055.1:1341400-1344352[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-17 1.2e-13 50.7 5.4 1 35 453 486 453 487 0.98
Sequence Information
- Coding Sequence
- ATGCGACAATCGTCAGCCAAACTAGATGACCTGTTAGCACCATTTAATGATAAATCATCTACCGCTCCATCAGCTACCGATGAAGAAACAGCAATCGCTGCATTAACGGCATTACGTAACAATAATCAccatttgaattttcaacatcaacagcatACCAGCAATAATACGAATACAAGCAGTAGAAGTAGCGACACTTCATCACCGCCTGTCTCAAAATCATCTTCAGTTACCTCTCTAATCAGTAGATTTCATTTGCAAAACTTGGAAGCAAATTCCGTTTCTGTGATTCCATTAGACACAACTAAACAGCAATCACAATCATCGACATCCTCAACTCGCACATCTCCATCGCTTGCACCACCTCAGATCAGCGTGAAGAATCTCAGCCAGTTGCAACAACATCTCGAAACGGCGGTCGTGCTGATGGATATGGGCAAGAAAGTTATAATTTCACCGCCCAATTCTAAGCCACAATCACCAAATTTGAACGAACAAAATAACAATAGCAAtagcagcaataaaaataatcatcaaagTATTACATCCACTGTGATAAAAGCTCAAGATTATTCAATTAGCAACCTTAAGCGAACTCCCAGTTGTGAAGAAATGGATTTGAGTAAGAAGCGAATGAAGACTTCAGATTCACCGAACAATAAACACGGCCAACAACGCCCTCAATCAGCCTCGATGGCTCCACTTTCTATTGTTAATTCGATGATGCCGCAGCTCATTAAATCTGAGGTGATTAAGAAGGAAGTTTTAGATTCAGGCGAGAATGACCACATGAGCGAGAAATCTGACGACAGTTCAGATTCAGGACGTCTTCAAATGGACATTTCGTCTCAAGAAGATaatgaagaatataaaaatcttCCAATTTTAAAACCAATCGGTCGCGATACACcagaaagtaatttttcagATGAACAAGCTTTTGAATCTGCTGATCAGTTATGGCAAGCTTTAGCTCAACATTCTCAATtAAATGGAGGAAATGAAGCTACACAATTGCTTCGTAAGATGATAAATTGTAGAACTTTGGGAATTCCTTTTTCACCACAACTTCATTTGCCTTCGGCGATCGAACAACCAATGGCTCTTTTAAAGGGTTCTCAAAAACAAACTGGTCGTCGAAAGCAAACATGTCCAAGTAGGTCTGGATTGCAAGATTTATCGGGTAAGAAAGTTGGTGGAGCATCACCACTTGCAGCAGGTTCTGGCGATCTTGGTGATACTTCTGGAAACCATTTATGGACTGGCTCGGATGACTTAACAAAAggcaacaataacaacaacaacagtccGAAGAATACCAACAATAATCAGCAAAGCTCCCAGAAAGATTTGTCTTGTACAAATTGCGGTACAACCACAACAACGATTTGGCGTCGTAACTTACGTGGCGAAATGGTTTGTAATGCGTGTGGTTTGTACTTTAAATTACATGGCGTTAATCGTCCACATACCATGCGACGAGATACAATTCATACTCGTCGACGACGACCAAAGGGTGACAAATCAAATCGAAGAAAGTCAAAAAATCAAGAAAGCCCTGAACAGGATCAAGACAATGGTGCTAAAACAGATTTAGCTGCTCTCCAAAATCATAATTTGTTAATAGCTTTAGCACGAGGTGGCACAAGTGGTGCAGCTCAATTCGCTATGCCTCATCATTACCAGTTCTTACGTGCTTCACAATTTCCAGTACAAAGCGAAGGTAGTGGAAACGGCGAGGACGTTGGTGATTCAGGTGATGAAAGTGGTGCTGAAAATGATTTAGATTCATGTAACTTGCCATTGAATCTTGTTGCAACTCAACTCGGTGATTCGTAG
- Protein Sequence
- MRQSSAKLDDLLAPFNDKSSTAPSATDEETAIAALTALRNNNHHLNFQHQQHTSNNTNTSSRSSDTSSPPVSKSSSVTSLISRFHLQNLEANSVSVIPLDTTKQQSQSSTSSTRTSPSLAPPQISVKNLSQLQQHLETAVVLMDMGKKVIISPPNSKPQSPNLNEQNNNSNSSNKNNHQSITSTVIKAQDYSISNLKRTPSCEEMDLSKKRMKTSDSPNNKHGQQRPQSASMAPLSIVNSMMPQLIKSEVIKKEVLDSGENDHMSEKSDDSSDSGRLQMDISSQEDNEEYKNLPILKPIGRDTPESNFSDEQAFESADQLWQALAQHSQLNGGNEATQLLRKMINCRTLGIPFSPQLHLPSAIEQPMALLKGSQKQTGRRKQTCPSRSGLQDLSGKKVGGASPLAAGSGDLGDTSGNHLWTGSDDLTKGNNNNNNSPKNTNNNQQSSQKDLSCTNCGTTTTTIWRRNLRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSNRRKSKNQESPEQDQDNGAKTDLAALQNHNLLIALARGGTSGAAQFAMPHHYQFLRASQFPVQSEGSGNGEDVGDSGDESGAENDLDSCNLPLNLVATQLGDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353407;
- 90% Identity
- -
- 80% Identity
- -