Basic Information

Insect: Clunio marinus
Gene Symbol: PRDM15
Assembly: GCA_900005825.1
Location: CVRI01000043.1:406029-409041[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 7.5 5.6e+02 1.6 0.5 1 16 74 89 74 90 0.88

2 26 0.0055 0.41 11.5 0.2 1 23 207 229 207 229 0.98

3 26 0.00042 0.031 15.0 1.2 1 23 237 260 237 260 0.97

4 26 0.00046 0.034 14.8 1.0 2 23 267 289 266 289 0.94

5 26 0.043 3.2 8.6 0.1 2 23 292 313 291 313 0.95

6 26 3.4e-07 2.5e-05 24.7 1.4 1 23 319 341 319 341 0.99

7 26 0.00048 0.035 14.8 4.7 1 23 349 372 349 372 0.95

8 26 0.00097 0.072 13.8 0.4 3 21 380 398 378 399 0.93

9 26 0.093 6.9 7.6 0.2 2 23 404 425 403 425 0.85

10 26 8.8e-07 6.5e-05 23.4 0.5 1 23 431 453 431 453 0.98

11 26 0.0056 0.41 11.4 2.4 1 23 461 484 461 484 0.96

12 26 0.0047 0.35 11.7 1.1 2 21 491 510 490 511 0.92

13 26 0.054 4 8.3 0.1 3 23 517 537 515 537 0.93

14 26 4e-07 3e-05 24.5 0.2 1 23 543 565 543 565 0.97

15 26 0.029 2.1 9.2 1.2 1 23 573 596 573 596 0.92

16 26 0.00093 0.069 13.9 1.5 2 23 603 625 602 625 0.95

17 26 0.32 24 5.9 1.4 2 23 646 667 646 667 0.95

18 26 1.7e-07 1.2e-05 25.7 2.9 1 23 673 695 673 695 0.99

19 26 0.0098 0.73 10.6 3.6 1 23 705 728 705 728 0.94

20 26 0.12 8.5 7.3 0.5 2 20 735 753 734 755 0.91

21 26 0.0047 0.35 11.7 0.2 2 23 760 781 759 781 0.91

22 26 0.024 1.7 9.5 2.7 1 16 787 801 787 808 0.73

23 26 0.00015 0.011 16.4 1.7 1 23 818 841 818 841 0.97

24 26 0.00019 0.014 16.0 0.8 2 23 846 868 845 868 0.92

25 26 5.6e-07 4.2e-05 24.0 0.9 2 23 871 892 870 892 0.96

26 26 1.7e-05 0.0013 19.3 1.2 1 23 897 922 897 922 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	7.5	5.6e+02	1.6	0.5	1	16	74	89	74	90	0.88
2	26	0.0055	0.41	11.5	0.2	1	23	207	229	207	229	0.98
3	26	0.00042	0.031	15.0	1.2	1	23	237	260	237	260	0.97
4	26	0.00046	0.034	14.8	1.0	2	23	267	289	266	289	0.94
5	26	0.043	3.2	8.6	0.1	2	23	292	313	291	313	0.95
6	26	3.4e-07	2.5e-05	24.7	1.4	1	23	319	341	319	341	0.99
7	26	0.00048	0.035	14.8	4.7	1	23	349	372	349	372	0.95
8	26	0.00097	0.072	13.8	0.4	3	21	380	398	378	399	0.93
9	26	0.093	6.9	7.6	0.2	2	23	404	425	403	425	0.85
10	26	8.8e-07	6.5e-05	23.4	0.5	1	23	431	453	431	453	0.98
11	26	0.0056	0.41	11.4	2.4	1	23	461	484	461	484	0.96
12	26	0.0047	0.35	11.7	1.1	2	21	491	510	490	511	0.92
13	26	0.054	4	8.3	0.1	3	23	517	537	515	537	0.93
14	26	4e-07	3e-05	24.5	0.2	1	23	543	565	543	565	0.97
15	26	0.029	2.1	9.2	1.2	1	23	573	596	573	596	0.92
16	26	0.00093	0.069	13.9	1.5	2	23	603	625	602	625	0.95
17	26	0.32	24	5.9	1.4	2	23	646	667	646	667	0.95
18	26	1.7e-07	1.2e-05	25.7	2.9	1	23	673	695	673	695	0.99
19	26	0.0098	0.73	10.6	3.6	1	23	705	728	705	728	0.94
20	26	0.12	8.5	7.3	0.5	2	20	735	753	734	755	0.91
21	26	0.0047	0.35	11.7	0.2	2	23	760	781	759	781	0.91
22	26	0.024	1.7	9.5	2.7	1	16	787	801	787	808	0.73
23	26	0.00015	0.011	16.4	1.7	1	23	818	841	818	841	0.97
24	26	0.00019	0.014	16.0	0.8	2	23	846	868	845	868	0.92
25	26	5.6e-07	4.2e-05	24.0	0.9	2	23	871	892	870	892	0.96
26	26	1.7e-05	0.0013	19.3	1.2	1	23	897	922	897	922	0.94

Sequence Information

Coding Sequence: ATGCGTGCTAAAAGGATTGTCATGAAAAAACAAGATTTGAAGGCCGTAGTGGTTCTGGAGGACATCTTTTCTGACTTTATAAACTGTCACGAGAAATGTCGTCTGTGTTTCAAAGACGTTACCGAAAAAGATTCAAGAATACAAATCACAGATGAGATTCAGAACAAAATTCATTCTGTCTTGAAGATTCATTTGTCATTGGATGGAATAGGATCAGAATTTATGTGTTCAAAATGTGAAACcattttaaatgattctcATCAGTTTAAgttcaaaataaatgagaaattgaaGTGTTATGAGAAGTTTAGTAACCAAAAAGTTAAAAACGCCCGAAATGAACTACCAGTCCCATTTCAcgacaatgaaattaaagttgaagacGAATTGAATTTATCAGCTGAGATGGAGATGACTTCTACATTAATTGAAgtcaaagaagaaacttcTGAAGATGGAAATGCAACCGAAACAGATGAATGTCAGAATGAAGAGGAAGATGAACCTGAAAAGCAGGATCATTCAAATCCTCAATTTATTTTAGGTGATTCTGGTgtgaaagtaataaaaaataatcacatTATCAAGCGACGTCgtaaaaaatatctcaaaaataaatttcagtgcgatatttgtggaaaattaatgaaaaccAGAACCGGCATTGTTGATCATATGAACACGCACAAAGAATTTAGGACGAAGGATTTTCAGTGTCAAATTTGTGGGAACTCttactttaataaaaatgggCTTCGATatcatattttgaaaaatcatgaaaaaccAAAGCATCTTACCTGTTCATTATGTAGCAGAACATTTAGAACTGAAGAAggtttaaaaaatcataagtCACGTCCTCATCGTTTACCTTGTGAGGTCTgtggaaaaatgattttaaacaaTGAACTCAAGCGACATTTAAAAATAGTACACTTCAAAATAAAACCATATCAGTGCGATAATTGTGGTAAGAAATTCAGCAGAAAACAACCTCTGATTAAACACCTGAATACGCACAAAGTTTAtagaacaaaagattttcattgtcaaattTGTAGAACCTCCTTCTTTGATAAACATGAACTTCGAAGACATATAttgaatattcatgaaaaacCAAAGCATCTTGCCTGTTCATCATGCAGAAAAACTTTCAGGACCGAAGAAGGCTTAAAAACACATATGTCACGTCCGTGTCGCTTAGAGTGTGATATCTGTGGGAAAATTATTAGTAGGAAAGAACTCAAGACACATTTTGATATGGTACACTTTAACATAAAACCATATCCGTGCGATGTTTGTGGAAAGaagttttataataaaacaCTTCTTGCTAAACATGTGAATACGCACAAAGATTTTAGAActaaagattttcattgtcaaattTGTGAAAGTTCCTACTTCAGTAAAGATACACTTCAAACGCATATATTAAGTAATcacgaaaaacaaaaacatcttACCTGTACATTATGTAGAAAAACTTATAGGACcgaaaaaggattaaaaaatcataagttACGTCCCTGTCGTTTAGCTTGTGAAGTGTGTGGAAAAATAATGTCGAGCAAAGAACTCAAGCGACATTTAAATCTGGTACACTTCAATATAAAACCATATCAGTGCGATATTTGCGGCAAGACATTCGGTAGAAAAACAAATCTTGCTAATCACGTGGATATACACACAGAGCTtagaacaaaagattttcattgtgaAATTTGTGGAACCTCCTTCCTCAATAAATATGCACTTCAATTTCACATCCTGAATTTGCATGAAAAACCAAAGCATCTCACCTGTACATTATGCAGACGAACTTTTAAGACCGAGCAAGGcttaaaaaatcataagttACGTCCACACCGTTCACCTTGTGAAAAGTTACAGCCTCATACTCAGACTCATCGTTTACCTCAAAAGGAAAGCTGTAAGGTCTgcagaaaaatgatttcaaaggAAAGTCTCAAAATGCATGTAAAAAGAATGCATTCCAGTATTAAACCATATCAGTGTGATGTTTGTGGAAAGAAATTCTGTACTAAAGCAAATCTTGCTCATCACATCATTACACATATCAATTTGGAACATAGAACAAGAGATTTCCATTGTCAAATTTGTAAAAGTTCCTTCTTTGATAAACATAGACTTAAAGCCCATATGATTGGTGTTCATGAAAAACCAAAGCATCTTAACTGTTCATTATGTAGAAGAACTTTTATGACAGAAGAAGgctttaaaaatcataaaatacgTCCCTGTAGTTTACCTTGTGAGATCTGTGGGAAAATGTTTAGAAAGGATATACTCAAGACACATTTGAATGCGATGCATTTCAACATTAAACCATATGAAtgcgatatttgtggaaaGAAATTCTGTAAATCTTATCTTGCTTTTCATATGAATATGCATATTGGTTTGGAACaccaaaaaaaagattttcattgtcaaataTGTGGAAGCTCCTTCTTCTTTAGAAGTGGACTTAAAGCCCATATACgaaatgttcatgaaaaaaaGCTTACCTGTTTATTatgtgaaaaaacttttaagaacaaagaatctttaaaagaTCATAAGTTACTTCCTCATAATTTACCttgtgatatttgtggaaaaCGTTTCCCTACTAAACATTCCCTACAGATTCATCAAAACATGCATGAAGAGCGAAATTTTGCTTGTGATATTCTTAGATGtctaaagaaattcaaaacaaaatctaaTCTTAAAAAACACATTCTAACcgttcataaaaaaaaaaggtga
Protein Sequence: MRAKRIVMKKQDLKAVVVLEDIFSDFINCHEKCRLCFKDVTEKDSRIQITDEIQNKIHSVLKIHLSLDGIGSEFMCSKCETILNDSHQFKFKINEKLKCYEKFSNQKVKNARNELPVPFHDNEIKVEDELNLSAEMEMTSTLIEVKEETSEDGNATETDECQNEEEDEPEKQDHSNPQFILGDSGVKVIKNNHIIKRRRKKYLKNKFQCDICGKLMKTRTGIVDHMNTHKEFRTKDFQCQICGNSYFNKNGLRYHILKNHEKPKHLTCSLCSRTFRTEEGLKNHKSRPHRLPCEVCGKMILNNELKRHLKIVHFKIKPYQCDNCGKKFSRKQPLIKHLNTHKVYRTKDFHCQICRTSFFDKHELRRHILNIHEKPKHLACSSCRKTFRTEEGLKTHMSRPCRLECDICGKIISRKELKTHFDMVHFNIKPYPCDVCGKKFYNKTLLAKHVNTHKDFRTKDFHCQICESSYFSKDTLQTHILSNHEKQKHLTCTLCRKTYRTEKGLKNHKLRPCRLACEVCGKIMSSKELKRHLNLVHFNIKPYQCDICGKTFGRKTNLANHVDIHTELRTKDFHCEICGTSFLNKYALQFHILNLHEKPKHLTCTLCRRTFKTEQGLKNHKLRPHRSPCEKLQPHTQTHRLPQKESCKVCRKMISKESLKMHVKRMHSSIKPYQCDVCGKKFCTKANLAHHIITHINLEHRTRDFHCQICKSSFFDKHRLKAHMIGVHEKPKHLNCSLCRRTFMTEEGFKNHKIRPCSLPCEICGKMFRKDILKTHLNAMHFNIKPYECDICGKKFCKSYLAFHMNMHIGLEHQKKDFHCQICGSSFFFRSGLKAHIRNVHEKKLTCLLCEKTFKNKESLKDHKLLPHNLPCDICGKRFPTKHSLQIHQNMHEERNFACDILRCLKKFKTKSNLKKHILTVHKKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -