Cmar001711.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_900005825.1
- Location
- CVRI01000001.1:1044148-1050589[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.067 1.4e+03 -0.8 1.2 59 103 89 133 69 152 0.71 2 4 1.6e-89 3.4e-85 285.7 11.8 2 218 211 416 210 416 0.90 3 4 0.38 8e+03 -3.3 0.1 55 72 443 460 425 483 0.45 4 4 0.32 6.9e+03 -3.0 0.4 82 82 644 644 587 680 0.46
Sequence Information
- Coding Sequence
- ATGCTTAACCCcattaaaagcttcttcaacTACCTTCAGAAGAATGCCACAAAAACAACGAATGATTTAAGTATGAACGACGAAATCAACGCATCACCTGAGGGTGTTGATTGTGGAAATTTTGACGATCCATTAACCGATCCTTTGGCGATCGATGATGACTTTACCGTGTCTAATGAAACCTTCCTTAATATTCCATTGGAGACAGAAAGGGATGTAACAATCGATAAAGTGATTTTTgttgacattgaaaaattgaaatgtaaagacaatgaaaatttacaaaatgaagaaagtgaCATAAATGGCAATGACAGAAAATTGTCATCAACAGacgaaattattcaaagaaatGGCGAACAAAGTTCAATTAAAGACGTTACAAAAGATGTTACTGACAGCAGTTTTGCAATAAATGTAAATAGTAGTGAACCAGAGCTTGAAGATGTCACCGACACATCAACTCTTCTTGAAGAGTTTCGCAGTGATGGCTCTGATTCTGGTTTAGGTTCTGATAGTCTTCGTAGCATtactgaaattgaaaagaatttagcGACATTAACACCATCAAGAAGCAGTTTAAAGAGACGATCAGCTGATAATCTTAATAATGAAAGCCTagtgaagaaatcaaaaagaagtttaaattttgGTGATGTTACTGTTTTTTACTTTCCAAGATGTCAAGGCTTCGGCTGTGTTCCTACACAAGGCGGCAGTACTCTCGGCATGACAGCTAAACATGcgtataaaaagTCTTTCACATTAAGTGAACATGGCATCGAACAACGACGTCTTTATCGGTTAAAAATTGCTGGTGATGAATTGAATGCAAGTAGCACATCAAGCGATGAATCGAAGAGTGAAGATGACATTAGTGAGAATAGTTTATCGGAAGGGGACAATGAAGCATATGGATTCTTACAACCAGTGACAGCACGACAAAGACGTGCCCTTCTCAAGTCAGGGGGTGTAAGAAAAATCGATACAAGTGAGAAGGACGAATGTCGAATGTTACGAACATCGCGAGAAGTTTGTGGATGTACATGTCGTGACTATTGTGATCCAGATACATGTGAATGTAGTCAAGCTGGCATTAAATGCCAAGTCGACCGATTAAAACCTCACGCTTTTCCATGCGGTTGTACACGTGACGCCTGCGCAAATGTTAATggaagaattgaatttaatccAGCGAGAGTTAAGACACATTTCATTCATACGATTATGAGATTGGAGCTTGAAAAGCGTCACGAATTCTCTGAAGACTGCACCAATAATACTAGTGTCATTCATCAAAGCCATTCTAAATGGTGGTCTCAAATGCGTGTtcagcagcagcaacagcaaacACCACATCAAGCAGAAAGTAGTTGCAGTTATACTAATTATTCATCTTATAGTAATGGCATTGCAGCGTCATCATCACAATATCCCACTAAAATTCCACCAATTTCAACGATGGTTGCATCAGGACAGGAATCATTAGATTTACATTACGCTTATCGCGAGGAATACGAAAGTGCCAGTTCATCTTTTAATAGCATGAACAATGGCGATTATTAtacaaattataataattatcaCAATGTCTCATCATCTTTACCAACATCATTGCAGAATGTTTATCAAAATGGATATCAAGTTGGATTACATCAAAACCCACAAATTCCTTCATATCAACAGCATCAATTACCACAATCAACATTCAACAATGATTGCCAATATTCAAATTACACTCCAACAAATGCCTCAAATCGATATCATCATCCTCACAATCAGCATTCTCGTGTTGATGTGAATGGAACTTCGTCGCATGGCTACGTATCAACAAACTATTCTTCTACTCAAATTCACAATGCAACTACAACAAATAATGTTGTTAGAGTCAATTATCAACAAACAACAGATCTTCATTGTCctgttgatgataatttctGCTCGATTACAACATCAACGACAACAGCATCGAACAACACCAATGATAGTCACGACACACAACCgcaaaatgaaacaaatgaaaatctcagCGAAATTATAAAGAAGTCAATTGTGGAGACTGTCACCGCTTAG
- Protein Sequence
- MLNPIKSFFNYLQKNATKTTNDLSMNDEINASPEGVDCGNFDDPLTDPLAIDDDFTVSNETFLNIPLETERDVTIDKVIFVDIEKLKCKDNENLQNEESDINGNDRKLSSTDEIIQRNGEQSSIKDVTKDVTDSSFAINVNSSEPELEDVTDTSTLLEEFRSDGSDSGLGSDSLRSITEIEKNLATLTPSRSSLKRRSADNLNNESLVKKSKRSLNFGDVTVFYFPRCQGFGCVPTQGGSTLGMTAKHAYKKSFTLSEHGIEQRRLYRLKIAGDELNASSTSSDESKSEDDISENSLSEGDNEAYGFLQPVTARQRRALLKSGGVRKIDTSEKDECRMLRTSREVCGCTCRDYCDPDTCECSQAGIKCQVDRLKPHAFPCGCTRDACANVNGRIEFNPARVKTHFIHTIMRLELEKRHEFSEDCTNNTSVIHQSHSKWWSQMRVQQQQQQTPHQAESSCSYTNYSSYSNGIAASSSQYPTKIPPISTMVASGQESLDLHYAYREEYESASSSFNSMNNGDYYTNYNNYHNVSSSLPTSLQNVYQNGYQVGLHQNPQIPSYQQHQLPQSTFNNDCQYSNYTPTNASNRYHHPHNQHSRVDVNGTSSHGYVSTNYSSTQIHNATTTNNVVRVNYQQTTDLHCPVDDNFCSITTSTTTASNNTNDSHDTQPQNETNENLSEIIKKSIVETVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -