Cmar015006.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- TRERF1
- Assembly
- GCA_900005825.1
- Location
- CVRI01000073.1:198539-223657[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 5.7e+03 -2.2 0.0 18 30 85 97 83 106 0.80 2 2 5e-11 7.6e-08 32.6 0.1 2 45 1269 1312 1268 1313 0.94
Sequence Information
- Coding Sequence
- ATGAATAAGGTTCAAGCCGGCTTGCGACTACCGCTGACTGGACTGGCGCCACCAAGGCTACTTATGTGCAGTGCATCGATGGGAGCAGAAGGTTCTGTGACATTGCAACTTAGAGAAGCAGTACAAGCTCCCGTTTCGGAATCTGGCACCACAATAAATAATGTAACAATCGGTTATCCTGATCCAGACGTTTTGGCCGATATGCTTGGTATATTTCAGGCTGGTGGAACTGATGCAACATTTGATATTGTCGAGAACGGTAATCGACCGCAGAGCATAGCGAATGCGTTCTTCAAAGCAAACGGTTTAACTACCACaacaattaataaaactgaaaCAGttgcTAAAGTAATCGAGACTGTAGCATCATCAAGCGTGTCTCATCATACTCAAAAGATTTCGCCGTCGTCATCGACAGCAGCTTCAATCGTAGTTTCAACACAACAGCCGCTTACTATGACAACTTTGGCTACCACAGTTACTCCATCAACCAATTCCAATTTACATCATGCTGCTGTTTCATCAACGCCGGCTAAAAAACAAAGACCAAAAACAGCGTCACCAACGCGACATGGTCCACAAGTATGCCAGGTTTGTAGCAAAGTGTTTGGCAATGCATCGGCACTGGCAAAACACAAATTAACCCACAGTGATGAACGAAAATATGTTTGCGGTATGTGCTCGAAAGCATTCAAACGACAGGATCATTTAAATGGTCACATGTTGACACATCGGAATAAGAAACCGTATGAGTGCAAGGCTGAAGGATGTGGGAAATCTTATTGTGACGCTCGCTCCCTGAGACGTCACACCGAGAACCATCATAGTACGCTGGTTTTGACAACGTCTACAGCATCATCACAAAATCAATCTAACAGTATGTCGTCTAATAACACAAGCAGTGGCACATCAACAATTACCAATCCCAGTTTATCACCAGCAACAGCAAGcgGCGATGCCAGTTCGCCACATGGCGCCACTTGCATACAATATCAGATAAATGGTGATGGCAACACAATAACTGCAATCAATTCTAAATCTCCATCGCCTAGTTCCCCTACGGGAACGAATAATGAAGGTTTAACACGTCAGCAGTTGGATTTGATTAGTCAAATCATGCAGCAAACGAAGCAAGCAAATGGACAGAAAACAACCGTGCAACGACCGAGAACTTGGAATATGCAGACTCAGCTTCAGAATGTATCAAAGACATCGTCGAGTCATGAAAATGTAAAGACAACTCAAGCAGCATCACCAAATAGTCAACAGAATGGACAAAAAGCTGAACAGAAGCCAGTTGAGTGCAATTTATGCCAtcgaaagtttaaaaatattccagcACTTAACGGGCACATGCGACTTCATGGTGGATACTTCAAAAAAGACACAGACACAAAAAAATCTGATAAGAAAGAATCGTCGGGGCCGCCTCTTCAAACAGCAAGCGTGGGTGTTCGAGCGCTTATCgaagaaaaaatcatcaacaaaagaaGCAAAGACTTAAAGGGAGCGTTTGTCGTCCCAGCTGCTCCACTATCCGCAACTCGGCGTCTCGCCGAAGCTGAAGCCTTTCTTAATGCAAAGAATGTAAACACACTATCAAACACTAATAACAACACGATAAAAATTGTGGCATCTGGTATAACATCGACGTCTCTTAATGGGCTAGCGAAACAGGCAATTGTGCAACAAGTAGCACAGCAAACTTCTCCCTCGAGTCTCGTTCCAAAAGCACAGATTTCACCGCTATCAAGTGACAAAGATGCTACATTGATTGAACTTCTTAAGCGTGGCACAAAAGTTGCTGTAAAAAGAACTTGCTCTGATCCCGGTCAACAAACATCAGCGGCACGAGTTATTGTGCCAACATCAATTTCATCTCCTGAGACATCCTCTGTTGACTCAACGACGTCTCTTGTTTTGTCAAATGGATCATCAAGTCCCTTGTCTTTAACAATCTCTCAAGCACCGTCAACATCTGGATCTTCAGATATTTACACTCTTGCTTACTCGGGCAACAATTCACCATCGTTCCTTAGTGATCAAGATGTTTATAATGTTAATGATACTGCAATGCTTTTACAAGCTGTCGATTCTATTCAATTACTTCAAGATAGTTCGACATCTGATCAACTTGATGACATTGGATCGTTGAGCGATTACACGTCATTATCAGAAAATGTATCATTGAATCAGAGCTTTACACCTTCGCGTCAATTACAAGCTGTTTTGGATTCACCGTTGCCTGATTCCCTGGTCGAGTTTGGCACACTCAATTCAAAAGATTACATGCTTTATGGAAGTAATGAATCACCAACAACATCGGCATCGCCTTTGCCATCACCTTATCCAACACCTCCAGCTAGTCATGAAACAATTGCGCAAGCATCGCCATTCTTAGACGACTCCCATCATTTCTCCGATGGCAGTACATTTTTCCATGAAGATAAAAAGACAAAGAATTTCCTGTTGGACGACAACAGTGAGTTCTTCTCGAAAAGTATAAAAGACAATAGCAACTTAACTGAAAGCGAACGAATACTTCAGTTGAAGAACGAACTGTTCAATGATAGTAAGAACGTACTGGAGGAGACAAGTAACTTTTTCCGCACCAACAAAAGCATTTTAGACGAACATGATCTCTTTAAAGGCGATAATAGTTTTTTAAATAACGATTCGAAAACATTCATCGGTGATAACAGTGCCAAATTACaagattttaatcaaaatttagaTTTCTTAGATGAAGCGCAAGCATTTAATATTGACGATGATCGTAATACGTCGTCGCCTTTGTCAGCCGCTTTCTTTTCTGCTGCTATGTCAACAGctgaagaagtaaaagaagCACTTGACGAGATTCTACCAAATGAAGATGATGGTGCTGGTTCGACATtagatttatattttctctcCGGTCTTTCACTTCAATCACAAATGATGTCAAACTCAGATGATCCACTTTTGTCATCAATACCGAGAGATTTTGGTAGTCAACGTCAACaaccatcaacaacaacaacgactacatcaacagcagcaacaacaacatcaacatcaatacaacaacaacaaaatcaacacCACTCGTCACAAGAGACACCAAACTTCGATATCGATCCATTTACACCACCAGAagctaagaaaattaaaaccgAACAAGGCCCCAATGAAATCAGTGATAATAGcgataagaatattttaaatgtacAAACCCAGCAAATCCTAACGAAGGAGAATATTGGTTCAGTCTTCCTGAGTCCCAACAGCATATCATCGAGCGGTTCATCACCAAAGCTCCATTGTGCATTAGtgtcaaagaagaaaatgcaaattgaTGGCACAACCGTAAAAAAACACGAACAGTTCAAATCaaatatgaagaaaacatCACAACTTCATTATACGCCATCACCAATGCTTAATCCCGAACGTCAAGGTAATGGATTATTCTCGAGAACATCTGTAGATAAATTAATTGACGTTGACGATGAAGAAGTAAATGTgattgatttctttgaaaagcCGAGGGTCAATATCGGTTCAGATTATCAAGTGTCTTTATCAACGGACATTATTTCATTGcaatatgatgaaaataaaccTTACGAAACGTTACTGTGGAAACCAAATGTACTTGAGGACAATCGTCAATTAGATCGCTTCATTGATTTGGCGAAATCGTCAGCTGTGATGATGGGCTTGCATTCAATTGAGTCAGCTCTAAAGGTGTTGATGGAGTCACAGGGAGAAGTTCATGTAGCAGTTCTAAAGCTCTTACAAGCACCAGATGTGAGTCTTGACAAACGTTGgacacaaaatgaaatggagaaatttttgaaaggTTTAGAAAGGtatggaaaagatttttcaagtATCTCTCGTGATGTTGAGAGTAAAACAACAGCCGATTGCGTTCAATTATATTACTTCTGGAAAAAGCTATGCAATGAATATAAATCTACACATCTTCCCCAACACAATCGTGAAAGCTACAATGAAAATAACAGTAACAATAACACAACAAATtgcgaaaataatttttttgattattccAACAACCATAATAATTCGAATAATTTAACGATCCATAACGGAAATATTATTGGACAGAATAATCCAACCACTGTCAACCAAAACTCTGAACTACGACCTCATGTATGCGAAGTTCCTGACTGTTCGGCCAGTTTTTCATCCCGCGTTGCTTTGCATGGACACACACGCATTCACTGTATCGGACGAAGCATGAACCAGTTGAATAATggtaatttattaaacaataCTATCCAAGCGGGAACAAACTTAAAGGATGATTTTCCCTGCAAGGTGTGCGGCAAAGTTTTCAATAAAGTCAAAAGTCGAAGCGCTCACATGAAATCTCACCGGCCTCAAGAAAATGAACACCAACAATGTTCATCGTGA
- Protein Sequence
- MNKVQAGLRLPLTGLAPPRLLMCSASMGAEGSVTLQLREAVQAPVSESGTTINNVTIGYPDPDVLADMLGIFQAGGTDATFDIVENGNRPQSIANAFFKANGLTTTTINKTETVAKVIETVASSSVSHHTQKISPSSSTAASIVVSTQQPLTMTTLATTVTPSTNSNLHHAAVSSTPAKKQRPKTASPTRHGPQVCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSTLVLTTSTASSQNQSNSMSSNNTSSGTSTITNPSLSPATASGDASSPHGATCIQYQINGDGNTITAINSKSPSPSSPTGTNNEGLTRQQLDLISQIMQQTKQANGQKTTVQRPRTWNMQTQLQNVSKTSSSHENVKTTQAASPNSQQNGQKAEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTDTKKSDKKESSGPPLQTASVGVRALIEEKIINKRSKDLKGAFVVPAAPLSATRRLAEAEAFLNAKNVNTLSNTNNNTIKIVASGITSTSLNGLAKQAIVQQVAQQTSPSSLVPKAQISPLSSDKDATLIELLKRGTKVAVKRTCSDPGQQTSAARVIVPTSISSPETSSVDSTTSLVLSNGSSSPLSLTISQAPSTSGSSDIYTLAYSGNNSPSFLSDQDVYNVNDTAMLLQAVDSIQLLQDSSTSDQLDDIGSLSDYTSLSENVSLNQSFTPSRQLQAVLDSPLPDSLVEFGTLNSKDYMLYGSNESPTTSASPLPSPYPTPPASHETIAQASPFLDDSHHFSDGSTFFHEDKKTKNFLLDDNSEFFSKSIKDNSNLTESERILQLKNELFNDSKNVLEETSNFFRTNKSILDEHDLFKGDNSFLNNDSKTFIGDNSAKLQDFNQNLDFLDEAQAFNIDDDRNTSSPLSAAFFSAAMSTAEEVKEALDEILPNEDDGAGSTLDLYFLSGLSLQSQMMSNSDDPLLSSIPRDFGSQRQQPSTTTTTTSTAATTTSTSIQQQQNQHHSSQETPNFDIDPFTPPEAKKIKTEQGPNEISDNSDKNILNVQTQQILTKENIGSVFLSPNSISSSGSSPKLHCALVSKKKMQIDGTTVKKHEQFKSNMKKTSQLHYTPSPMLNPERQGNGLFSRTSVDKLIDVDDEEVNVIDFFEKPRVNIGSDYQVSLSTDIISLQYDENKPYETLLWKPNVLEDNRQLDRFIDLAKSSAVMMGLHSIESALKVLMESQGEVHVAVLKLLQAPDVSLDKRWTQNEMEKFLKGLERYGKDFSSISRDVESKTTADCVQLYYFWKKLCNEYKSTHLPQHNRESYNENNSNNNTTNCENNFFDYSNNHNNSNNLTIHNGNIIGQNNPTTVNQNSELRPHVCEVPDCSASFSSRVALHGHTRIHCIGRSMNQLNNGNLLNNTIQAGTNLKDDFPCKVCGKVFNKVKSRSAHMKSHRPQENEHQQCSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00347030; iTF_00199032; iTF_00199346;
- 90% Identity
- iTF_00347030;
- 80% Identity
- iTF_00347030;