Cmar011132.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- mbt
- Assembly
- GCA_900005825.1
- Location
- CVRI01000042.1:1155047-1169662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3 2.1e+03 -1.3 0.0 1 14 300 313 300 315 0.87 2 4 0.0006 0.98 9.4 0.0 23 39 1357 1374 1337 1378 0.69 3 4 4.7e-06 0.0077 16.2 0.0 3 42 1672 1710 1670 1713 0.88 4 4 2.2e-06 0.0037 17.2 0.0 5 37 1888 1920 1885 1924 0.88
Sequence Information
- Coding Sequence
- ATGTtttcgaagaagaaaaaaaagcctCAAATATCACTTCCTTCCAACTTTGAGCATCGGGTTCATACTGGATTTGATCAAAAGGAAGGACGTTATTTTGGACTTCCTTTACAATGGGCATCGATTGTCGGCAACAATCAAATACTGAAAAGTTCCAATCGTCCAATGCCTctCGTTGATCCCTCTGCAATTACGCCCACAGAGATACTCGACTTGAAGACAATTGTGCGACCACAAAGCAGTTTGGCAACAACAATCGGCGACACTACAATGTCGTCATCAATGGGAGGCTCAGATCATATGCAAAACTCTCATACATCTTATAATGGATTTAATCTGCCGAAAATCTCTCATGTTGCACGATCTAACTCGCTAAGATGTTCAAGTCCACCTCGATTAAATCATCGTGATCCTCACATTCCGAATCCCGTTCAAGAAGAGTCTCAACAACAGCCAATACAATCGCAACCATATCCTCTCGTTCATCATGTTGATCCGAATGTTAGAAAACTTCCTTATAATAACAACAACGTTCAACCACATCCGTTGATTCCGagtaataataattcaattccGTTTAATGGGAAAAATGGAGGAATTAACGAAGGAAATAAGCAAGGACAATATCCAATTCATCCAGGACCATTAACAGCTCATCATCATCCCACACCAATGGGCCcacttcaacttcaacaacacCATttccaacaacatcaacaaatgcAATTACAAAAGCAACTCGAACAGAATCCTGGCGCATTCCGACAACATCAAGACGTTGCAAACAACAATCCACAACGAGGTTCTGTAACAAGTTCAGTTAATTCAACTGGCATGCAATCAACTGGAACATCAGCAGTTACAGGTCTTAATGGCAACAAACAAGAACAACGATTAACTCATGAACAATTTCGATCTGCACTTCAAATGGTTGTATCAACAGGCGATCCAAGAGAGAATTTAGAGAACTTCATTAAAATAGGAGAAGGTTCAACTGGCACTGTTTGGATAGCAGCAGAGAAAAATACAAAGCGTAAAGTTGCCGTTAAGAAAATGGATTTACGGAAACAACAACGTCGTGAACttctttttaatgaagttGTCATCTTACGGGACTATCACCATCCAAATATTGTTGAGACTTACAACAGCTTTTTGGTGAATGACGAGTTATGGGTGGTGATGGAGTATCTTGAAGGTGGAGCACTTACCGACATAGTGACACATTCAAGAATGGATGAAGAACAAATTGCAACAGTGTGCAAGCaagttttgaaagctttggCTTATCTACACAGTCAGGGAGTTATTCATCGTGACATTAAGTCGGATTCTATTCTGTTGGCGTCAGATGGTCGTGTGAAGCTTTCTGATTTTGGATTCTGTGCTCAAGTGTCGCAAGAACTTCCCAAGAGAAAGTCACTTGTTGGAACACCTTATTGGATGTCACCAGAAGTCATTTCAAGACTACTTTATGGGCCAGAAGTTGATGTTTGGTCACTCGGCATTATGGTAATTGAGATGATTGATGGAGAGCCTCCGTTCTTTAACGAGCCACCACTTCAAGCCATGCGACGAATTCGAGACATGCCACCACCAACACTAAAAAATGCGCATAAAGTGTCATCAAGATTGAGACGTTTTCTTGATCGTATGTTGGTTCGAGATCCAGCATCAAGAGCGACAGCTGCTGAGTTATTAACTGATCCGTTCTTACTTCAGGCGGGACCACCAAGTATTCTTGTGCCAATTATGGCCACAAAGgaattGAAATTTCCCATTAAAGTTATTAGTTACAgcgttttaaattattttctgggtcttatgaaaatattctttaagaTTTCTAACATgccaaaagaaaaaaaatcttgggTTTGGCGACACTTTGAAGCTGGagataaaaatgttgcaaagTGCAAACATTGCGGAAAAGAAATTCAGCGCGCAGCTTTTGGAACGTCGTCGATGGCTAGTCATTTAGCGAGTCAGCATAATCTATccaataaacagaaaaaagaaaaaatcatggGATCATCAGAAGACGATGAAATTACGGGAACATCAGATAACGAggaaacaaaaatagaaaaatcaaaagcCAAAAAATCCTGGGTTTGGCTGCACTTTGAAGCTGAAAGTAAAAATGTTGCAAAGTGCAAACATTgcggaaaaaaaattcagcGCGCAGCTTTTGGAACTTCGTCGATGGCCAAACATTTAGCGAGTCAACATAATCTATCCagtaaacaaaagaaaggaGAAATTATGGAATCATCAGGCGACGAGGAAACAAAAATAGCTAAGAAAGGGAATCTTCTAAATAAATGCCGGTTATGCTTTAATCTCGTACAACTAGAAAACCACCAAAcacaattaaatgaaaaatacaaaaatatgataaatGACATCCTAGAAattcaaTTGATTTCATCACctaaaacttcaaattttctatGTCAACTTTGCATCTTCAGTGTCGAAAACTTTCATcgattcaaaagaaaaatgagagaaaagcAGTTTcgattaagaaattttttagaCTCCTCTGAGCCAACTGAATTCGATTCATCCGCTAACGACAACAcagttttgattaaaattgagCCAGAAGACACTTCATCAATGTTTTTTATAGAGCCAACTACTGAATTACTCTCTGAATTCCTACGAGAGGACGATTcatctgaaaaagaaatcaaaaaagaattcgaaattgatgaaaatatcgaagaaagtgctaaaaatgaaaatattagaaataaaTCTTGTTCTGAAagaCAAAACAACGATGTTCaggaaatcttttcatttatggGAAGTcaacagaaaattattcattcgtACTTAAAAAGTCCCCGTTACAAACAGAATAAAAAGGCAAAAACTGTTGACACAATATCTGATAACAATTCCTATCCTGCTGAGAATGAAGTTGAGCTTAACCATTCAAATGGGAAAGAAACtgcaaaattattcaaaattgaaaacaaaagcgaGTTGAATCttcaagaaaattcttcacatGAATTTCAAGacatgaaatcatttgaaaaagatcaaaattCTCATAGAAATTATTTGCCTTGTGAAATTTGTGGAAAGCTTATAAAGCGAGGCATAAATACAGCATTGCATGTTCAAAGAGttcatgaaaaaatgaagCCTCACCAATGTGAAGTTTGCGGGCATGGATTCTTCGATAGAGCGAGACTCACCACACACATGTTAGTGCACATGCCAAAAGAATTAAAAcccaaaaattataaatgtgATCATTGTGACTTATCCGTTGCCACCAAAGGAACACTCAAAGAGcatatgatttcttttcatgttaaCGTTGGAAATCATCTGTGCAATTTATGTGGAAAATCTTTCTTGACTCAGAGACAACTAAACAAACATCGATACACCCAtagggaaaaaaatattcaatgcgATTATCCTGAATGTGaaagtttattcaaatatAGAGCAGCAATGttgaaacataagaaaaatcattggACTGAATTACGAACTCCTTGTCCTTATGAAAATTGTGACAAGACCTACACTGGTAATCAGCATTTAGCTCTGCACATTTTTATCAACCacaagaaaatcaaagaaaattgtccAGTTGGTAATGGATGTAAATTTGCGCATTTGATTAATCAAAGGAAGACGTTAGTGGCTTTGAAAGACGCATTGGATGCTTTGGATGAGGAAAGACACAAAGTGATTGCATTAGAAGAACAAATCAACAACTCGACACATGAAGCAGACAAAAATAACACAATGGAGTCAATCTTAAAACGCCGAAGGGAGTTGGAATCAAGTTTCAATGCGATCACTGTGGCAAGTCTTTCGATAGCAAACGAGGTGCTGTTATTAGAACATCAAAGGaataaacataagaaaaaatattttgatcagCAAATAGAAAAAGTAATTCAAGcacagaaaaaaagagttcGTAAGGAGGCAAAGCGCTGTAAAACCTTCGGATCGTTACCAAAcaGTGAAAATTTGAGGAAAGCCTTAAAGGATATTAAAAGAGGTCGTAACTATAGAGCTACCTCTGAAAAATACAATGTTCCTAGAAGTACATTATTTCAGTACTATAAAAGTAATAAACCAGCTGACGAATATCAAACAAATCTCATCTATCTTAAAATCCCGAAGGGAGTGAAGTTTCAATGTGATCGCTGTGGCAAATCATTTGAAAGCAGACGAGGTGTAAAATGGCATCTATTAAGTGTACATTACAAAACTGGATCACATCTTTGTGATTTTTGTGgcaaaaaatttatcaatccGAGCAGATTGACAGCTCATCAGTTGAAACATaacgaaagaaatattcaatgtgATTATCCAGAttgtggaaaacttttcagaagCGAAAAGGAAATGCAAAGACATAGAAAAGGACATTACATCGAGCTAAGAATAAAATGTCCTTATGAAGATTGCGAAAAGAGTTACAGCAGAAAGCCTCATTTAGATATGCATATTTTCATCAACCACAAGAAAATCAGAGAAAATTGTCCAGTTGGAAATGGCTGCAAATTTTCAGTTGGAAGAAAATGTTACATGAGAGCACATCTAAGGAAACATTCTGAACTTTCTCCTGAAGAATTAGAAAGACATATTAAAGATTTATCAAAaatgaagaaatgctatttgtatttatttgttaattttaataNTTATAAAACTCTTATAAGAGAGAAACAAtacttttttgaaaaattcttaaaatcaaACAACTTTATCGACAACTGCTCTGAAGAAATTAAACaggaaatcattttcaacacagtttttattaaaacagaACCTGAAGAGAATTCATCAGTCGTTCATCATCCAACCGATGAATTGCTTTTTGAGCATTTACCTGAAGTTGAATGTTTAAAGAAAGCCTTAAAGGACATTAAAAATGTACATATTCAACCTGATTGTGGAAAAATTCATAATGTGGCCCGTCGCTGTCAAATATACGACCCAAACCGAAACAgTGAAAATTTAAGGAAAGCCTTAAAGGATATTAAAAATGGTTATAAATATAGAGCTGCCTctgaaaaatacaaaattccAAGAAGTACCTTATTTAAGTACTATAAAGAGAATAAACCAGCTGAGCAATATGAAACAAATCTCATCAATCTAAAAACGCCGAAGGGAATTGGAATCAAATTTCAATGTGATCGCTGTGGCAAAGATATGATTTCAGATGTTTTAATCAACATAGAAGACATTTTTGGTGAATTTAAAGGAGAAAATCTCAAAGAAATATGTCGTCTATGTTTTAATTCAttagaaacagaaaattatcaagcaaatattattgaagaatataaaagcATGATAAATGACATCCTAGAAGTTAAATTGATTTCCTCATCTAAGGCTTCAAATTTCATATGCCAAAGTTGTGTGACCAgtattgaaagctttcatcattATAAAACTCTTATAAGAGAGAAACAATACttttttgaaaagttcttaaaatCAAACAACTTTATCGACAACTGCTCTGAAGAAATTAAACaggaaatcattttcaacacgatttttattaaaacagaACCTGAAGAGAATTCGTTAGTCATTCATCAACCAACCGATGAATTGCTTTTTGAGCATTTACCTGATGTTGAATGTTTGAAGAAAGCCTTAAAGGACATTAAAAATGGTTTCACATATAGATCAGCTTCTATAAAATATAAGATTCCCAGCAGTACATTACATAGGTAccataaaatgaataaaccAATTGAACTATATCGACCACCTGtcatgaatattaaatttccgAAAGGAATTAAGTTTCAATGTGATCGCTGTGGCAAGTTTTATGATACCAAACATTCAGTGAGATggcatttaattaaagtacATTTCAAGAAACATATTCAACCTGATTGTGGAAAAATTCATGATGTGGTCGGTCGCTGTCAAATATACGATCCAAACCGAAACAAGCTAGCTTAG
- Protein Sequence
- MFSKKKKKPQISLPSNFEHRVHTGFDQKEGRYFGLPLQWASIVGNNQILKSSNRPMPLVDPSAITPTEILDLKTIVRPQSSLATTIGDTTMSSSMGGSDHMQNSHTSYNGFNLPKISHVARSNSLRCSSPPRLNHRDPHIPNPVQEESQQQPIQSQPYPLVHHVDPNVRKLPYNNNNVQPHPLIPSNNNSIPFNGKNGGINEGNKQGQYPIHPGPLTAHHHPTPMGPLQLQQHHFQQHQQMQLQKQLEQNPGAFRQHQDVANNNPQRGSVTSSVNSTGMQSTGTSAVTGLNGNKQEQRLTHEQFRSALQMVVSTGDPRENLENFIKIGEGSTGTVWIAAEKNTKRKVAVKKMDLRKQQRRELLFNEVVILRDYHHPNIVETYNSFLVNDELWVVMEYLEGGALTDIVTHSRMDEEQIATVCKQVLKALAYLHSQGVIHRDIKSDSILLASDGRVKLSDFGFCAQVSQELPKRKSLVGTPYWMSPEVISRLLYGPEVDVWSLGIMVIEMIDGEPPFFNEPPLQAMRRIRDMPPPTLKNAHKVSSRLRRFLDRMLVRDPASRATAAELLTDPFLLQAGPPSILVPIMATKELKFPIKVISYSVLNYFLGLMKIFFKISNMPKEKKSWVWRHFEAGDKNVAKCKHCGKEIQRAAFGTSSMASHLASQHNLSNKQKKEKIMGSSEDDEITGTSDNEETKIEKSKAKKSWVWLHFEAESKNVAKCKHCGKKIQRAAFGTSSMAKHLASQHNLSSKQKKGEIMESSGDEETKIAKKGNLLNKCRLCFNLVQLENHQTQLNEKYKNMINDILEIQLISSPKTSNFLCQLCIFSVENFHRFKRKMREKQFRLRNFLDSSEPTEFDSSANDNTVLIKIEPEDTSSMFFIEPTTELLSEFLREDDSSEKEIKKEFEIDENIEESAKNENIRNKSCSERQNNDVQEIFSFMGSQQKIIHSYLKSPRYKQNKKAKTVDTISDNNSYPAENEVELNHSNGKETAKLFKIENKSELNLQENSSHEFQDMKSFEKDQNSHRNYLPCEICGKLIKRGINTALHVQRVHEKMKPHQCEVCGHGFFDRARLTTHMLVHMPKELKPKNYKCDHCDLSVATKGTLKEHMISFHVNVGNHLCNLCGKSFLTQRQLNKHRYTHREKNIQCDYPECESLFKYRAAMLKHKKNHWTELRTPCPYENCDKTYTGNQHLALHIFINHKKIKENCPVGNGCKFAHLINQRKTLVALKDALDALDEERHKVIALEEQINNSTHEADKNNTMESILKRRRELESSFNAITVASLSIANEVLLLEHQRNKHKKKYFDQQIEKVIQAQKKRVRKEAKRCKTFGSLPNSENLRKALKDIKRGRNYRATSEKYNVPRSTLFQYYKSNKPADEYQTNLIYLKIPKGVKFQCDRCGKSFESRRGVKWHLLSVHYKTGSHLCDFCGKKFINPSRLTAHQLKHNERNIQCDYPDCGKLFRSEKEMQRHRKGHYIELRIKCPYEDCEKSYSRKPHLDMHIFINHKKIRENCPVGNGCKFSVGRKCYMRAHLRKHSELSPEELERHIKDLSKMKKCYLYLFVNFNXYKTLIREKQYFFEKFLKSNNFIDNCSEEIKQEIIFNTVFIKTEPEENSSVVHHPTDELLFEHLPEVECLKKALKDIKNVHIQPDCGKIHNVARRCQIYDPNRNSENLRKALKDIKNGYKYRAASEKYKIPRSTLFKYYKENKPAEQYETNLINLKTPKGIGIKFQCDRCGKDMISDVLINIEDIFGEFKGENLKEICRLCFNSLETENYQANIIEEYKSMINDILEVKLISSSKASNFICQSCVTSIESFHHYKTLIREKQYFFEKFLKSNNFIDNCSEEIKQEIIFNTIFIKTEPEENSLVIHQPTDELLFEHLPDVECLKKALKDIKNGFTYRSASIKYKIPSSTLHRYHKMNKPIELYRPPVMNIKFPKGIKFQCDRCGKFYDTKHSVRWHLIKVHFKKHIQPDCGKIHDVVGRCQIYDPNRNKLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00346900; iTF_00347071;
- 90% Identity
- iTF_00346900; iTF_00347071;
- 80% Identity
- iTF_00346900; iTF_00347071;