Cmar018950.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- ct
- Assembly
- GCA_900005825.1
- Location
- CVRI01000064.1:1924001-2000410[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-27 1.9e-23 82.5 0.0 3 72 598 668 596 673 0.95 2 3 2.9e-32 3.1e-28 97.8 0.0 3 77 982 1057 980 1059 0.96 3 3 4.8e-31 5.1e-27 93.9 0.0 3 76 1220 1294 1218 1297 0.96
Sequence Information
- Coding Sequence
- ATGAACAATTTACGTGGAATGCAGCCCACATTGCCACCACAGAGCACTGGGGCAGCTGATGATATGGATAGCCTTCCAGCTGTACAGTCAATGGATTGGTTATTCAAAAAAGAACGCATTTATTTATTGGCACAATTTTGGCAACAGAGAGCAACGTTAGCTGAGAAGGAAGTTAATACATTAAAGGAACAATTGACATCAACCGCAACATCcaaaacacaaacaaacacCACATTAtcaaattcaacaacaacGACCACAATCACGCAAAACGGCACATCACCACCTTCACCCTCCACCACTCCACTTTCGCTTCTATCCGATAATAACGATAATCACAACACAAGCAACAAATTGCTAAACAATAACAGCATCAAAAGCTGTCATTTGGATGACGAAAACATGGACAAGAAGCTTAACGACGTAAACGAAATGATTGATAACAATCACGAAGATGACGATGACGTCAAAGAAGAAACTAATCATTGTACAAGCAACCGATCGACACCCacaagtgaaaaagaaaaaaatgtcgaagACGACGATATGGTCGATAATGACGATGAAAATGCAACAGAATCACATGATAATGGTGATCGCTGTAGCGTGAAGTCGGGAAAtgtaaataacaacaacagtgTAAGCACTCGAACAATGGCTGAGGAATTAGCATTAAAAGATAAAGAGATATCACTGCTGATCGAAGAAATTGCACGATTACGAACAGCGATTCAGGCACTTCAAGAGTCACACAACGTACAAATACAGCGATTGGAGGAGAGCTTGGATGCAAAACGACAGCACATTATCCGTTTAGAGAATAGAATAGGCAAAAGCGATAATGatgatatgaaaaaagaaaatagTATTTTAAGATCTGTTGATTTATCGACAACAACGACTGATTCGAAACAATTCCAAGAACTTTTATTAGAACGTACAAAGGCATTTGCTGCACAAAATGAAGTACTGAAATCATCAAGCACTGATGGAACGGCAGTGTCATCTGTTAATAATcttaataataacaataataaatacaATATTAATAATAGCTTTCATGATATCCTTACGCCAATCCAACAACTCAAGAATATcagtaataaattgaataacaataataatatcAAGTTAAATCAAACCGAAACACGTCCAGCATCAACGCCATCGTCACTTTTACCGCCACCCCTTCAAAATGTTGAGCAATTCAGCTCGATGTTGGGCGaagaaattgttaataatTGGCGACATTCTTCCTTTATTGATTTACCACCACCATCACCAATCAGCTCGACCGCTTCCAACGCACCTTCAACACTCTCGAAATTGACCACATCGATGCAAAATCGAATGATTAATCACTTTCCAAATTTCGCAGATTGCTTAAACCAGAATCAAAATCACCACACACAATCTGGTCAGGACGTCGATAAAAGTAGTCATCACGACGCATCATCGACGGCAAGTACTCCGAACCTTCAAGACGCACGTTCAGAAGATAATTTGAATAGTCGTGGGGGCGTTACAACGCCTATGTCATTGCCGCCAATATCCAAGAGTCCCTCTGAGGACAATCATCCATTAATGCACAACGGTTCTGGTCCCTTCAACCCATTACAGTTCAATCCATTTGGTGAACGAGGtaataatcattttaaattcgCTGAAGACCTTAATCTACCTCCTGGTGCAATGATAGGACGCTTGGGCGATTCACTGATACCTAAAGGTGACCCAATGGAGGCGCGTCTGCAGGAAATGCTTCGCTACAACATGGATAAATATGCAAATCAAAATCTCGACACGCTTCACATTTCGCGACGTGTTCGTGAATTGTTATCGGTTCATAATATTGGCCAACGTTTGTTTGCCAAATATGTGTTGGGATTGTCACAAGGAACTGTTTCAGAGCTGTTGTCGAAGCCAAAGCCTTGGGATAAGTTGACAGAAAAGGGTCGTGATAGCTATCGTAAGATGCATGCTTGGGCCTGTGATGATCAAGCGGTGATGCTTCTAAAGTCATTGATACCGAAGAAAGGTCCAGAATCGGGCATGCCACAATTTGGACGACCAGATTCAGGTGATTTAAATGATGATCGCATTCATCACATCTTAACGGAAGCATCAAGTATGATACAAAAACCATCGCCACAACAAAACAACTTGCATAATTCAATTCCCATGAAACACCTTGAAGATTCTCATAGCATTGAAGACTCAAAGTCACCACCAAACTGCACGTCACCATTCTCCaagagaaacatgaaaaaatatgaaaatgatgacATCTCCGAAGAGAAACTTCAAAAGATTTATCAAGAAgagtttcataaaattatggCACGTGGTCAACGAGACACATTTCCCaataTTCTGTTTCCACACTTTTTTAGTGCTGCTGGCATGCCACCGCTTGCCGATGAAAATATTCGTCTTGCATTAGAAATGTATCAACGAGAATTTTCAAAGTTACAACAGCAAAGTGGAGCTGGTATTCCCAACTTTACTAACAATCTAACAAGTCTTCTTGCATTGCAACACCAGCAAGCACTGAACGGTGCTTCCATTCAAGATTTATCGATACCAAAAGACCCAAAGCAGATGGGAAAGTCAAATGGGTTGTCATCTGAAAGTGATAATGAGAACAACAAAGATCTTGAAGAATCTATGCGAAGTGCTTTCAGTATGGTGAAGCCTAAACCAGAACCTACTTCAACACCAACGACAACAGCTTCATCAGCTCCAAGTCCAATCAGCAACACAATTTTGCCACCAGTCACACCAACCGATGACTTCTCAGTTGCTGCAAGTCCACTTCAAAGAATGGCTTCTATCACTAATTCTCTGATGTCACAATCGCCCGTTCCGTCACATCATTCATCACCACAACGTCCATTGAAAGCTGTTTTACCACCAATCACTCAACAACAGTTCGATTTGTACAACAATCTAAACACCGAAGACATCGTACGACGTGTTAAAGAAGCATTGTCGCAATACTCAATCAGTCAGAGATTGTTTGGTGAATCTGTGTTGGGATTGTCACAAGGTTCAGTTTCCGATCTTCTTGCGCGTCCAAAGCCTTGGCATATGTTAACTCAGAAAGGTCGCGAACCATTCATTCGCATGAAGATGTTCTTAGAAGATGACAACGCAGTTCATAAGCTTGTTGCAAGTCAATATAAGATTGCACCTGACAAGCTTATGCGAACTGGTAATTACAGCTCAAACCCTCAAATTCCTGCCcaactttcaaaacaaatgCCACCAATGCCGAAACTTCTAAGCGAACAAATGGCAAAACTTCAAGATCCAGCGTTGCTTCATATGCAGATGAGTCAAATGGCACATTTGTCACAAGCTGTTgctcaacaacagcaacagcagcagcaacaacaacatcagcaacaacaacatcatcaacaacagcaacaaatgaGAGATGCACATCCTTTGTTATTGACACCACCTGGTCTTCCACCTCAACATGCAATTCAATTGCCACCTAAAGATCAAAAGTCTCAAAATGATAAGAAGATGATGCCAATTCATTCGCCACAACATCCCGACACACCGCAACCGCCATCATCAGCAAATGTTATGCGTAACATGAGTCAACATATCTCACCAACTGTCTATGAGATGGCTGCACTTACACAAGATTTGGACACTCAAGTCATCACAACAAAGATCAAAGAAGCTCTGCTTGCGAATAATATTGGACAGAAGATTTTCGGTGAAGCTGTTTTAGGATTGTCGCAAGGTTCTGTATCGGAATTACTTTCGAAGCCAAAGCCTTGGCATATGTTGAGTATCAAGGGACGTGAACCATTCATTCGAATGCAGTTGTGGTTGAACGATGCTAACAATGTTGAACGTTTACAACTTCTGAAGAATGAAAGACGAGAAGCAATCAAACGACGACGTTCAACAGGTACGGGTGGTCATGACAACAGTTCTGACACCAGTAGCAATGATACATCGGAGTTTTATCATTCAAACTCACCAGGTCCAGCTTCAGTGACATCACAATCGGCACCACCAAATAAGAAACAGCGCGTGTTGTTTTctgaagaacaaaaagaagctTTGAGACTTGCATTTGCACTCGATCCATATCCAAATGTTCAAACAATTGAATTCTTGGCAAATGAACTTAATTTATCAACAAGAACAATCACCAATTGGTTCCATAATCATCGCATGCGTCTAAAGCAACAAGTGCCGCATGGTCAACCAAGTGAACCAATTCCATCACGTGAAAATCAATCTGGCGCTCCATTCGATCCCGTTCAATTCAGAATTCTATTGAATCAAAGATTGATGGAGATTCAAAAGGAACGAATGGGACTTGGTGGTATGGCTTTACCTTATCCACCATATTTTGCTGCAAATCCTAATCTTGCTGCTTTGATTGGTCGTGGATTGTTGAGTGGAACTGATGCAGAACAACTTGCAGCTTTAAACAATGCTGTTAAAGAACAAATTATGGGCTTGGATCTCTCGATGACATCATTGAAacgtgatgatgatgattacgATGATATGGATCAGAACTCAGACAACGAAGGTGGAAATGACGATGATAACGAATCACTTTCAGATTCTCGTcacaataataataacgaTCATGGTAAAGACATGTCACCACCACCACAAGCAATCTCGCGAACATCAAGAAGGAAACCAGCAGCACCACAATGGGTCAATCCACTTATTACAATGAATCCAGGTGATTGGCGCGACGACACTAAGAAGAACATCGCTGATGATAAAGAAGTCATTATTAATGGAGTCTGCGTAATGAATCAATCATCAGATTTCAAATcagatgatggtgatgatgcaAACGTGGAACAGTCGAATGATGAAGGTGACGAACCCGACTCTCGATTGACCATTGCTGAAGGTAACGATGAAGACGACAtcaagaaatctttcattaaaaaaccAAGCATTGAAAAAGCTTCAGGGGAAAATGGCGATGatgtaaaagtgaaaaaagaagtcGACGAGTCAAATGCGTGGGAGTACTAA
- Protein Sequence
- MNNLRGMQPTLPPQSTGAADDMDSLPAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLTSTATSKTQTNTTLSNSTTTTTITQNGTSPPSPSTTPLSLLSDNNDNHNTSNKLLNNNSIKSCHLDDENMDKKLNDVNEMIDNNHEDDDDVKEETNHCTSNRSTPTSEKEKNVEDDDMVDNDDENATESHDNGDRCSVKSGNVNNNNSVSTRTMAEELALKDKEISLLIEEIARLRTAIQALQESHNVQIQRLEESLDAKRQHIIRLENRIGKSDNDDMKKENSILRSVDLSTTTTDSKQFQELLLERTKAFAAQNEVLKSSSTDGTAVSSVNNLNNNNNKYNINNSFHDILTPIQQLKNISNKLNNNNNIKLNQTETRPASTPSSLLPPPLQNVEQFSSMLGEEIVNNWRHSSFIDLPPPSPISSTASNAPSTLSKLTTSMQNRMINHFPNFADCLNQNQNHHTQSGQDVDKSSHHDASSTASTPNLQDARSEDNLNSRGGVTTPMSLPPISKSPSEDNHPLMHNGSGPFNPLQFNPFGERGNNHFKFAEDLNLPPGAMIGRLGDSLIPKGDPMEARLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDQAVMLLKSLIPKKGPESGMPQFGRPDSGDLNDDRIHHILTEASSMIQKPSPQQNNLHNSIPMKHLEDSHSIEDSKSPPNCTSPFSKRNMKKYENDDISEEKLQKIYQEEFHKIMARGQRDTFPNILFPHFFSAAGMPPLADENIRLALEMYQREFSKLQQQSGAGIPNFTNNLTSLLALQHQQALNGASIQDLSIPKDPKQMGKSNGLSSESDNENNKDLEESMRSAFSMVKPKPEPTSTPTTTASSAPSPISNTILPPVTPTDDFSVAASPLQRMASITNSLMSQSPVPSHHSSPQRPLKAVLPPITQQQFDLYNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPDKLMRTGNYSSNPQIPAQLSKQMPPMPKLLSEQMAKLQDPALLHMQMSQMAHLSQAVAQQQQQQQQQQHQQQQHHQQQQQMRDAHPLLLTPPGLPPQHAIQLPPKDQKSQNDKKMMPIHSPQHPDTPQPPSSANVMRNMSQHISPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDANNVERLQLLKNERREAIKRRRSTGTGGHDNSSDTSSNDTSEFYHSNSPGPASVTSQSAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLANELNLSTRTITNWFHNHRMRLKQQVPHGQPSEPIPSRENQSGAPFDPVQFRILLNQRLMEIQKERMGLGGMALPYPPYFAANPNLAALIGRGLLSGTDAEQLAALNNAVKEQIMGLDLSMTSLKRDDDDYDDMDQNSDNEGGNDDDNESLSDSRHNNNNDHGKDMSPPPQAISRTSRRKPAAPQWVNPLITMNPGDWRDDTKKNIADDKEVIINGVCVMNQSSDFKSDDGDDANVEQSNDEGDEPDSRLTIAEGNDEDDIKKSFIKKPSIEKASGENGDDVKVKKEVDESNAWEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256900;
- 90% Identity
- iTF_00346633;
- 80% Identity
- iTF_00346633;