Cmar003501.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- kn
- Assembly
- GCA_900005825.1
- Location
- CVRI01000074.1:840737-849977[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-232 1.1e-228 760.6 0.0 40 385 35 392 29 395 0.99 2 2 9.3e-10 9.9e-06 24.4 9.5 422 496 395 476 391 485 0.72
Sequence Information
- Coding Sequence
- ATGTTTGGTTTAGCTCCAAGTGATCTCAACCAACCAAGAGGTCCAGTTACTagtataaatttaaaatctgaaGAACCTTTAAATATTAGATGGATGCAACCTGATCAATCAAGtttagGAATTGGTCGCGCCCATTTCGAAAAACAGCCACCATCCAACTTAAGGAAatccaatttttttcattttgtcgTTGCGCTTTACGATCGAACAGGTCAGCCAATTGAAATCGAAAGGACTGCTTTCATAGGATTCATAGAAAAAGATCAGgaaGCTGATGGccaaaaaacaaacaatggAATCCAGTACAGACTACAATTACTTTATACAAATGgTGCAAGGCAGGAACAAGACATATTTGTGAGATTAATTGATTCTGTAACAAAACAGgcAATTATTTATGAAGGTCAAGATAAAAATCCAGAGATGTGCAGAGTGCTTCTCACACATGAAGTAATGTGCAGTCGGTGTTGCGACAAAAAAAGCTGTGGGAACAGAAATGAAACTCCATCAGATCCAGTTATTATTGATAGGTTTTTTCTAAAGTTTTTCCTCAAATGCAATCAAAATTGTCTAAAAAACGCTGGAAATCCAAGAGACATGAGAAGATTCCAgGTTGTGATTTCAACTCAAGTTGTAGTAGACGGGCCACTTCTTGCAATTTCTGATAACATGTTTGTACACAACAATTCTAAGCACGGAAGAAGAGCTAAAAGATTAGATCCTGATGGCAGTGGAACAACCACTGGAATATATCCTCCACTTCCAATGGCAACTCCATGTATAAAAGCAGTTTCTCCAAGTGAAGGCTGGACTAAAGGCGGGGATTCTGTTATCATTATAGGAGATAACTTTTTTGATGGGCTTCAGGTTATATTTGGAACTATGCTTGTATGGAGTGAACTCATTACAACACATGCAATAAGggTACATACACCTCCAAGACATATACCAGGTGTTGTAGAGGTAACATTATCATACAAAAGCAAACAGTTTTGTAAGGGATCGCCAGGAAGATTTGTTTACATATctTTAAATGAGCCAACAATTGACTATGGCTTTCAACGATTACAAAAACTTATTCCTCGTCACCCTGGAGACCCAGACAAGTTGCCAAAGGAAATTATTCTTAAAAGAGCAGCTGATATTGCAGAGGCTCTTTATTCAATGCCTCGATCTCCATCAGGAGGGACAGGCTTTAACGCTTATTCTAGTCAGTTGGCTGTTAGTGTTCAATCTGATAGTGGATCACAATGGGGTGATGGAGACGAGTACAATCGCACTCAAAGTAGCAGTGTTAGCCCTCGTGGATACTGTTCCAGTACTTCAACTCCCCACTCAGGAGTTTCCGGGTCATACGGAACATCAACTATTGCGGCTAATGGATATTGTCCTCCGATATCTGGATTGACAACGCCCATATCAAATGCAAATACATTTAATTCAACGTCAATTTACTACCGCTGA
- Protein Sequence
- MFGLAPSDLNQPRGPVTSINLKSEEPLNIRWMQPDQSSLGIGRAHFEKQPPSNLRKSNFFHFVVALYDRTGQPIEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLYTNGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVVVDGPLLAISDNMFVHNNSKHGRRAKRLDPDGSGTTTGIYPPLPMATPCIKAVSPSEGWTKGGDSVIIIGDNFFDGLQVIFGTMLVWSELITTHAIRVHTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYISLNEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADIAEALYSMPRSPSGGTGFNAYSSQLAVSVQSDSGSQWGDGDEYNRTQSSSVSPRGYCSSTSTPHSGVSGSYGTSTIAANGYCPPISGLTTPISNANTFNSTSIYYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320381;
- 90% Identity
- -
- 80% Identity
- -