Cmar015718.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clunio marinus
Gene Symbol
ARID5B
Assembly
GCA_900005825.1
Location
CVRI01000063.1:744155-750263[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-15 1.8e-11 44.5 0.0 2 89 463 546 462 546 0.85

Sequence Information

Coding Sequence
atggaaattaagACCATAGGAAACCAGTACAGTCAATATGGCTCTTCGACCTTCTACAAGGGACTTCGTTTGACGATACCGTCAACTGTGAAAACAGAAGtcatcaataataataataaatgtttaaaccAAGCAAGCGCTAAAGACAGttgtgaagatgaaaaaaaatctgaaaacgAAAGAAGtaTTACCAACAATTGTAAGACATTCATTATTGCTATGGGCGATTGCATACCTGTTCGACCGTGGGCCGATTCTCCAATTGAATGCCTTGCAGAAGTTCGAATGATATGGAGAGATAAAACTGAACAATCACTTTTGCTAAGCTTAAGGCTTTTCTTTTTACCGGAAAACACTccaaaaggaagaaataatcATGGCGagGACGAAGTTGTTGCTGTTAAAGATTTGGAATCACCTAGAGGACGAATAGTAATTCGTGCTGAAGATTTCACCTCATGGGTCGTTGAAGATTTGCAATGGAATTGGGGCCTTACAGCAAGTTTTCATGATAAGTCATCAACAAAGCTTACTTCTTCTTCTAATGGCATACCTGTTACGTCACTTCTATCAAACTCCAAACTAGACTTTAGTGaagtggaaaaagaaaaggaaatagtcGACAATTTGCATTCCAACGTGACTATTTTGAGTTATTCGAGATATTGCAGATATCGTGCGACACTTAAACGTTTAGAACACATAGAAGATAATCAGATTCGAATTAAATTGATAGAAACATTAAGCGGATTTGTTGCTTCTCAACCTAATACTCGAATAATGTTTGCTAAGGAGACAATTGATTATCCGGATTTGGAATCACATGAAATGCTTTGTCCACATCTTGCGCCAAAACTTAAAGGAAGACCACGAGGTCGTCGATTGAAAATTACCAGTAGAGTATCCGAGTGTTCATCTCCAGCTCCATCTTCTGAATTCTCTGTAGACAGTGGCGAAACAAACGATTCAGATGTGTTTGATGGAAAACATTTGatgaaaaataaagataatCAGAAAATGAGTCAACGATTGACTCGAAACAAGAGAAAATCGGAATCAATTCAGACAGAAATTTACACGACATTGTCAACTGGACGTGTTTCTAAGCAACGTTTACCTTTATCGCCACTTAAATCTGTTaccaataaaagaaaaaagaaatcaaacgaATCAGATGATGAACCAGATTCGTCATCCTCTGAGGATAATAATGAAGACGAAGATTATGATGACAAATATGTCAATCgtaaaatgaaacaagaatcgggatcgaaaagaaaagtttcacttaAAGATGATGAGAATGGAAATGAGCGAAACAGCGTTTCCATTATGAATCTTATACCAGCACTACAGATCCCAATAGATGCATACAAGAGTCCCGAAGAACTTGACTTTTTGATTCGATTAAACAACTTTATGACCGAGAGAGCTCAATCATATCCAAAATTGGTGTGGAGTTTAAGAGATgTCAACTTATTTACAATTTACACTCGAGTACAAAAACTTGGAGGATTTGACGCAATTGCTGATAATCGAGTGTGGAAGAATCTGTTCGAAGATCTTTCTGAACCTGGAAAGTGCATTACTCAAGGCATGACCAAACGAAAATACGAAAGAATTCTCTTGCCTTTTGAACGTTTCGAACGTGAGCTCAGAGAAAATGGGAAATATAAATCTGAACTTACAATTTCAACGATTCCAAAAGGGAAAGTTAACCATCGAGAGTCTCAATTTAATCGCAATCAAAATAAACGCCCACGCTCATCATCGCCTGCAATAGAAATAATTCCTTTGAAAAATGGCTCATCTGATCATTCGGAACTTACTTTTGAACAAATCAATGAAATacaaaacattattaaacCAAAAGATTACGAAAATCAGCATTTCTACAATGGTCACAGTAATGATGGTGTCTCCGTTCCTGTTCATGTGATTGTTCGGCCAACAACAAGTACATCAATCGCTGAAAAGATTGCAAACCGAAAACGTGGTTTTGAGAATCAAAACAATTCATATTCCTTTACaaacaacaatcaacaaaaacctaaagagaaagaaaatattcctaTGATGCCGTCAAGTACAACAATCGTTCCATTAAAAAGTGACGGTTTTCCAACCTTCTCTCCAACAAACGTCGTTGAGTTAATCGACAGTGACGACGAAAGTAATTGTCGCaaaggaaatcaaaatatGAAGAAGCGCAAGTTGGATATTTTGAGAGAAGGAGGATTAGAAGTCACACCAATAAGTCGTCGAGCTCAAGACTTTCTTATGACTTATCCCCATCACAATCCAGGTCGTTCAAATACAAACAACATGCAGCCAAATGTCAGCTTAATGTCACTCTCGCCAGCACGAGCACCTCCGGTAATTCAAAGCTTCAATATGTATCAGTCAACAAGTCAAGTGTTCAAAAATCCAAAAGAAGATGTCATAAATGCAACGAGAAGCTCGAAATTGAGTTGCTTGGATCTTACAAGTAAAACATCAAACGAACAGCAACATTCATACCCGCAATCTTCTGACATGTTTCGTGATGTTCGCAAGAATTTGCTGTCAATTGAAGAAGTTCAGAAAAATTATCGCGGTTCGAATCCTGATCTACAAATTACTCTCGTAAAACCGAATCCAGACAGTTCAGTtagcaataataataacaataacaataataatagtAATCAGAAAGTTGTTCATCAAACTGGTTTTAATAGACCATCGacaaagaaacttaaaaaagtGCCATCACAAACACTTCCACCTGGTATTCCACCAATAAATCCAGTCATTATTGCAGCAGCAAATGAACTACAAAAACTTCAACAGCGACAGAACATGCCACCGTTGTTTCCTTTTCTATCGGGATTAGACATCACACCGTTACAACAATCAACTTCCTCAAGAATGCCAAAACCATCGACGTCATCACCATCATCTGAACATATAGACAATGCGTTGTCATATTTGTCAGCACTTTATTCAAATCCACTATTGCAGGGAAGCAACATTTTGTCACCAGCTGCTGAATTCTTGAAGCTTTACACAAGCTCAACCTCAGCTAATCGAGTTCCATCAAGTAAAAactaa
Protein Sequence
MEIKTIGNQYSQYGSSTFYKGLRLTIPSTVKTEVINNNNKCLNQASAKDSCEDEKKSENERSITNNCKTFIIAMGDCIPVRPWADSPIECLAEVRMIWRDKTEQSLLLSLRLFFLPENTPKGRNNHGEDEVVAVKDLESPRGRIVIRAEDFTSWVVEDLQWNWGLTASFHDKSSTKLTSSSNGIPVTSLLSNSKLDFSEVEKEKEIVDNLHSNVTILSYSRYCRYRATLKRLEHIEDNQIRIKLIETLSGFVASQPNTRIMFAKETIDYPDLESHEMLCPHLAPKLKGRPRGRRLKITSRVSECSSPAPSSEFSVDSGETNDSDVFDGKHLMKNKDNQKMSQRLTRNKRKSESIQTEIYTTLSTGRVSKQRLPLSPLKSVTNKRKKKSNESDDEPDSSSSEDNNEDEDYDDKYVNRKMKQESGSKRKVSLKDDENGNERNSVSIMNLIPALQIPIDAYKSPEELDFLIRLNNFMTERAQSYPKLVWSLRDVNLFTIYTRVQKLGGFDAIADNRVWKNLFEDLSEPGKCITQGMTKRKYERILLPFERFERELRENGKYKSELTISTIPKGKVNHRESQFNRNQNKRPRSSSPAIEIIPLKNGSSDHSELTFEQINEIQNIIKPKDYENQHFYNGHSNDGVSVPVHVIVRPTTSTSIAEKIANRKRGFENQNNSYSFTNNNQQKPKEKENIPMMPSSTTIVPLKSDGFPTFSPTNVVELIDSDDESNCRKGNQNMKKRKLDILREGGLEVTPISRRAQDFLMTYPHHNPGRSNTNNMQPNVSLMSLSPARAPPVIQSFNMYQSTSQVFKNPKEDVINATRSSKLSCLDLTSKTSNEQQHSYPQSSDMFRDVRKNLLSIEEVQKNYRGSNPDLQITLVKPNPDSSVSNNNNNNNNNSNQKVVHQTGFNRPSTKKLKKVPSQTLPPGIPPINPVIIAAANELQKLQQRQNMPPLFPFLSGLDITPLQQSTSSRMPKPSTSSPSSEHIDNALSYLSALYSNPLLQGSNILSPAAEFLKLYTSSTSANRVPSSKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-