Cmar013544.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clunio marinus
Gene Symbol
JARID2
Assembly
GCA_900005825.1
Location
CVRI01000059.1:653998-660929[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-22 2.2e-18 66.6 0.0 7 89 1223 1303 1218 1303 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCGAAGCGCAAGAAGGATGTCAAGGAGCCCGCCTCAGCGCCTCCAGAAATAAAAAGaACAAAAATCCAAGCGCAACGTAAATTTGCACAGGGACAACAGCCACCTTCTTCAGCATATCTCACCTATAATCTAACATCAGGTAGTGAAACTCCAGTTAAAGAGAAATCACAGGAAAGAGAATTGTTGCCAAATCTACGTCCAAACACAGAagattttcttacatttctttGTTATCGTGGCACAAATGCTCTTCCTAAAGAGTGCGATTTTCAAAATACCCTCAATAGGCCATCGACAAGTGGCACAACGGCAAAAGGAAACAAAAGTGGAAGTGATAAAAAGAACAAagatattaagaaaaaatctCCTATAAAGAAACAGGAAAATGCGACAGTTGTAAAGGAGTCGCAGATTTCGAAACCTTCAACATCACAAGAAAAAGATCCTAAAACTGGATTTATGCCTTTCGCAGTTCGTAAACGAGCTGAAATTCATCCTcttaaaaatgataagaaaaagcTGCAGTTGATGACTAAGAAACGAAAAGAACAGAAACAAGACTTGGACTCTACAAGTGAGTCATTGAATGGACCAAGAACGACAAGAGCAAACAACACAAATGATGTTAGTGTTaataaaaatacgaaaaaattgaaagatacAAGTCAGGATTCATCTTTTTCTGAACCTGTGAAAGTGGATTCGCCTCACAATTCAACGCTAAATAATGAGTCAAATAAGGAAGAGGAAACTAAAAAGAACGCTGAGAAACGTCAAACAAGACTATCTGCAATTAAAAATCCTCCACAATCAACATCGACACCGAaggaaagtttgaaaaaagaGGAATCTGAAGAGTCGATTTCTTCATCTGAAGACGATGAGCCTTTAATCAAGTCGGAACcgaagaataagaaattaaagttaCAGGAATCTAAGTCCAATGCTGActtaatgaaatctttttgctCTGATGTCAACAAGTCTTCGTTGACTAATCATAACAACAGCTCGCAGAATGACTCAAAGCAAAGTGTTGTCAAATCAAATCGTggcagaaaaaagaaaattgtaattgaaaaatcaaaagaaaagtcaccagaaagtgaaaaatcgcctgaaattaagaaagttgtgagaaagaagaagacaaatgtTGATCAAGAAATTGCAAATTCGCAAGCCAACACGACAGatttaagtgaaaatgaaGCGCGTGGACGACcaatgagaaaaacaaaagaagcgGCAACGATTTATATGGAATTAATAGGACGCAAATTAACATTGCGTGATTCATCTGACAATGATTCTTCACTTGATAGTCTTGAAGTTCCAAATCTCAAACGAGTTGAACTTCTTGAGAAtgaattgaaagcaaattgtGAAAAGAAGGCCAAAGAAGCTGAAGCTGAAGCcgaacaaaagagaaaaactgaTGCAAAAAACTTAAAAGGAAAACGCgggatgaaaaaattattagaagGGGAAGACGAAGAAGTGttagaagaagtgaaaaaaataaaggaagaaaaggttttagaaaaaagttttagtgATTCCGACGAAGAGCCGCTTGCAACAAAGCTGACAAAACAATCGTCGGAAAAGCCTCCGGAGAAACCAGCACCGAAGAAACGTGGACGGAAAAGCAATCAAGAACTTGCTGAAATAGCCGCTCGGaaggaaaatgagagaaagGAAGCCGAACAAATAAAATCGCCTCCTAAAAAGTGTGAGtcgaaaaagaattcattaaatCAATCTCCAAGTGCCAAACTGTCaataagtgaaaagaaaataaatgaaaagcaagTCAAAAATAATGCTTCAGAGCTTTCACGTCAAGAAAAACAATCAGCGGAAAACACGCACAACCGTCAGACAGAAAAACCGAAAATTCTTCagactgatgatgatgagtttGTCAAAGGATTTGATTCAGCTGGTGCCAAACCAATGGCATCAGTGAAGTCGTCAATAAATTTACTTCCAAGTAAAGAAGAATCTGAAAAGATTTTCGGCATTGCGAGTGTGACACTTGCACAAAGTTGTGGACCTTTAGACACCAAGTGCACTTTGGGTAAATGTGGATCAGTTCATGTTCATAAACCACCATTAGCTCCACCAGTTCTAACTGAGTCAGCTTTAGGTGCAAGTCTCTCGCCAAAAGATCGTCGTAAGAGTAAAGTGAACATGAGTCGAGAACAAATTCAAAAGTGGTTGGAAGAAGCTTCATGGACGCCAATTCCGGACGATGAAATGGAAACTGTTGACataaaaacaacatcaaaagctTCGACATCAAGTATTGGACATTCAAAATCTGGTGATGATTCTCAATCTTCGAGTTtaataagagagaaaaatgttgtgCAACAATCGCCATCAACAAGTGGCAAAACTGAACAACAAAGCAAACAACAGAAAGAAAGTTCACTCATCACAACTAAATTTCTTGcgaaagttgatgaaaaaattaaatcaaattttccattgaaGAATGAAGAGTCAAAGAAACAACAACCGCAGCCGTCAAACTCTGTCAAAGGCAATCAACAGAAAGCGAATGGTTCGAAGATGTCAGAAAAAGCTGTGAAATCTCCATCGAGTAGCGTTGCTGAAAAGAAAACTCCAATTtaccaacaacaacagcagcagcagcaacaaacACAGAAACGTCGAACGCCTGTTTACAAAACTGACAATAAAGTTAACTCAAAGTTGACTCCAATGTTACCCAAAAGCTTTGGTGCCTTTTCGCCTGAGAACGAACACagtatttattcatttgataGAGAAGACGACGATCTTCCAACTCCAGCAACTCCATTTCGTCGAAGTAATTCAAAAACTGAGAGCGATGCTTTTAACAAACTCGCATTAACGCCAAACAAGCAAATGTctcagcaacaacagcaatcgCAGGTTTCGTTGACATTAAGTCCGGATGAGAACCGAAAATCTGCTGCAATTAGTGTCGGTGGTGATGaagtgaagaaggaaaatgaaaaagtggAGAATAAGGAGCGAGATGGTGAAAACGATTCAGATTCGGAGGGTCATACTTTCTACATTCCTTTGCAAGCATCGAACGTGTCAGGAAGTAAGACAATTCAAGGTGTTGCTGTGAAGTTGGGAACGGAAGGAGCTGAAGGTCCGAATCAAAGGATTATAATGCATGCTAAACTTGTCACAAAGTCGCGAGCTAACACAACGCCATTACCTGAATCTGTTAATAATGTTCAAGAGCTTGTAAAGTCGTTGATGGCTAACAAAGAAACGACGACGACATCATCAACAACCACGACAAAGCCAGTTCCATGTGCGACTGTTCAACCACGTTTCAAATCAAACGACACAGAACCAGAACCAAGCACGTCATCTTTAGTTGCCACAACGAAAACGAAACAAACACCTAAACTAGGAAATCTCACTGAAGCTCCAGTCTTTCGTCCAACAGAGAAAGAGTTTCAAGATCCAATCGAATATATTGAAAGAATTACTCCAATGGCATCAAGATTTGGCATTTGTCGTATTATTCCACCTGAAAGCTTCAAACCTGAATGTCGTGTAAGTGATGAAATGCGTTTCACAGCTTACGATCAATATGTTCATAAAATGCTGCATCGATGGGGTCCAAGTGCGAAAGAATTTTCAGcgattaagaaatatttagcGACACAAAGTATTGTTTTTCAAAGGCCACCATTAATAGCTGGAATTGAAGTTGATCTTCCTCGTCTTTATCACACTGTGCAAGAGCTTGGTGGCTTAAAAGAAGTcattgagaagaagaaatgggCTAAAGTAGCTGAAGATATGTGCATTCCAAAAACAGCTCACGATCGTGTCACTAAACTCGATGATATTTactgtaaatatttgttaccTTACGACACATTGTCACATAGCGAACGTCAAAAGCTTTTCGATGAAGTTGAAGCTGATTGGGCGAAACGTGAAGCAAAAGCTCGAAGAAATGCTGATAAAGGAATTGACTCTGATGAGCAGAGTAATGAAGAAAGTGAAGAGagtgatgaagaagatgaagatgacaATGCATCGATGGAGTGTATGATAAAAGGCCGAAGCATGGCATTAAGTCAATTCTATCGAGTTGCACGAAACATGGTGACATTATGGTTTAAAACACCTGAACCTTCTGTGTCTGAAATTGAAAGCGAATATTGGCGTCATGTTGCTGTTCGAGACAGTCACGTTTGCGTTCATTATGGATCAATTGATTCAAGTGGCTATGGCTACGGTTTTCCTGTTCCGGgatcgaaaacaaaaatgtcgCCATGTTCGAAACATCCGTGGAACTTGAAAGTTCTTACAAATAATTGTGGATCAATATTGAGATCGCTTGGACCTGTTATGGGGGTCACTGTGCCGACACTTCATGTTGGAATGCTTTTTAGTGCTGTTTGCTGGTATCGTGATCCAACAGGACTTCCATGGATCGAATATTTACACACTGGAGCAAGTAAAATTTGGTACGCAGTGCCGGATAATCAAAGTTCCAACTTCAGAACGGCTTTAACATCTTTAGTTCCTTCACATTGTCAGAACAAAACAATTTGGTTGCCTTGCGATACTGCTATGgTTCCACCTTACATGTTGACTGATCGGAATGTGTCTTTGTGTCGTACAGAACAGCAACCGGGACAATTTGTGATTGTTTTTCCTAGAGCTTATACTTCAAGCGTCTGCACAGGCTACACAGTTTCTGAAAGTGTTTATTTTGCAACAAATAGTTGGCTTAATACTGCACATCTTGACTTTAAGGTTTGTCACAACTTTTTATGcctttataaaaaattaatttatgtttttcaaatcAGGATATACAAGAAAGTTGCGAACCTACAATGTTCTCATTAG
Protein Sequence
MVVSKRKKDVKEPASAPPEIKRTKIQAQRKFAQGQQPPSSAYLTYNLTSGSETPVKEKSQERELLPNLRPNTEDFLTFLCYRGTNALPKECDFQNTLNRPSTSGTTAKGNKSGSDKKNKDIKKKSPIKKQENATVVKESQISKPSTSQEKDPKTGFMPFAVRKRAEIHPLKNDKKKLQLMTKKRKEQKQDLDSTSESLNGPRTTRANNTNDVSVNKNTKKLKDTSQDSSFSEPVKVDSPHNSTLNNESNKEEETKKNAEKRQTRLSAIKNPPQSTSTPKESLKKEESEESISSSEDDEPLIKSEPKNKKLKLQESKSNADLMKSFCSDVNKSSLTNHNNSSQNDSKQSVVKSNRGRKKKIVIEKSKEKSPESEKSPEIKKVVRKKKTNVDQEIANSQANTTDLSENEARGRPMRKTKEAATIYMELIGRKLTLRDSSDNDSSLDSLEVPNLKRVELLENELKANCEKKAKEAEAEAEQKRKTDAKNLKGKRGMKKLLEGEDEEVLEEVKKIKEEKVLEKSFSDSDEEPLATKLTKQSSEKPPEKPAPKKRGRKSNQELAEIAARKENERKEAEQIKSPPKKCESKKNSLNQSPSAKLSISEKKINEKQVKNNASELSRQEKQSAENTHNRQTEKPKILQTDDDEFVKGFDSAGAKPMASVKSSINLLPSKEESEKIFGIASVTLAQSCGPLDTKCTLGKCGSVHVHKPPLAPPVLTESALGASLSPKDRRKSKVNMSREQIQKWLEEASWTPIPDDEMETVDIKTTSKASTSSIGHSKSGDDSQSSSLIREKNVVQQSPSTSGKTEQQSKQQKESSLITTKFLAKVDEKIKSNFPLKNEESKKQQPQPSNSVKGNQQKANGSKMSEKAVKSPSSSVAEKKTPIYQQQQQQQQQTQKRRTPVYKTDNKVNSKLTPMLPKSFGAFSPENEHSIYSFDREDDDLPTPATPFRRSNSKTESDAFNKLALTPNKQMSQQQQQSQVSLTLSPDENRKSAAISVGGDEVKKENEKVENKERDGENDSDSEGHTFYIPLQASNVSGSKTIQGVAVKLGTEGAEGPNQRIIMHAKLVTKSRANTTPLPESVNNVQELVKSLMANKETTTTSSTTTTKPVPCATVQPRFKSNDTEPEPSTSSLVATTKTKQTPKLGNLTEAPVFRPTEKEFQDPIEYIERITPMASRFGICRIIPPESFKPECRVSDEMRFTAYDQYVHKMLHRWGPSAKEFSAIKKYLATQSIVFQRPPLIAGIEVDLPRLYHTVQELGGLKEVIEKKKWAKVAEDMCIPKTAHDRVTKLDDIYCKYLLPYDTLSHSERQKLFDEVEADWAKREAKARRNADKGIDSDEQSNEESEESDEEDEDDNASMECMIKGRSMALSQFYRVARNMVTLWFKTPEPSVSEIESEYWRHVAVRDSHVCVHYGSIDSSGYGYGFPVPGSKTKMSPCSKHPWNLKVLTNNCGSILRSLGPVMGVTVPTLHVGMLFSAVCWYRDPTGLPWIEYLHTGASKIWYAVPDNQSSNFRTALTSLVPSHCQNKTIWLPCDTAMVPPYMLTDRNVSLCRTEQQPGQFVIVFPRAYTSSVCTGYTVSESVYFATNSWLNTAHLDFKVCHNFLCLYKKLIYVFQIRIYKKVANLQCSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-