Cmar017222.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clunio marinus
Gene Symbol
Arid4b
Assembly
GCA_900005825.1
Location
CVRI01000004.1:1343709-1349535[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-24 2.7e-21 76.0 0.1 2 89 277 361 276 361 0.96

Sequence Information

Coding Sequence
ATGCAAGGAATAcctcaaaaagaaaaagatgacCCAGTGGTCTTGGCTGTAGGAACTCAAGTAAGTGCAAAGTACAAAGGAGCATTTTGTGAAGCAAAAGTGAGAACAATcgtgaaaaatataaaagttaagGTTGCGTATCGACGAGGAGGAACAGGTAATGTGTCTGATGACGACATTATCGGTGAAATACGTATAGGAAACGTAGTTGAAGTTCGTGATCTTgataaaaaggaaacattGGAAGCAACAATCACAAAAATTCAAGATTGCTCACAATACACGGTCGTCTTTGATGACGGTGACATCACAACATTGAGAAGAAGTGCTTTATGTCGTCAAAgtggaaaacatttcaatgcaTGCGATACTTTAGATCAATTACCATTAACACATCCAGAACATCGCGGTGGTGGTAAACGATCAAAGACGCAAGACGAATGGTCAGACGAAGATGAAGAATATGCGATTGGAAAAGTGATTTGCGTTGAAAACACTGacacgaagaagaaaaatgcaaaagaaaGTTATTTTCCAGCACTAGTAGTAGCTCCTAAAGCTCAAGAAACAGCtaaaattcatattaaaaCTGAATATCTCGTTCGATCATTCAAAGATGGTCGCTATTACACTGTACCCAAGAAAGAAGTGACAGAATTCACAAACGACACAGCACAAAAGTCAGACATCACTGCAGTTAATGCTGCGCGAGAATATCTCGATAAGAACGTCTTACCAACTCATTGGGATCGTGAAGTTCTCATCGATTCAGCAAGTTTAAGCGAACAAGAACTTTCTGACAGTTCAGACGACGAGCcaaatgaagtgaaagatCGATTCTTTGCACAATTGCTGGAGTTCATGGAGAAACGAAATTCGCCATTAAATAAAGGCCCAAGTATCACAAATCGAGATGTTGACCTTTATCGGCTTTATTATTCAGTTGAAAAACTTGGTGGCTATGCAAATGTAACGAAAATTCACAACTGGAAGGCGATAGCAAAGAGATTGGGCTTCATGCCCACTGATGCTATTGTTAAGCTTGTGAAACATTCTTATCGTAAATTCCTGCTCGCTTTTGAAGAAGCTGTAAGCAAAGGAATTGAAGAACTTCCACCAAGGACTAACAGAGATAAAGCAAGAAGTAGTTCAACTCGATCGGGATCGGTTGCATCACCAAAAGTACCAGAAAGTACAAAAGCATCATCAAAGAAGTCAATTGATAAGCCAAGCACAAGCAGTATCGCTGATGATTCAGAAAACACGAATGAATCAACAAAgttaacaacaacaagaaaactttcgaCAGCAAGCAATAAAGTGAAAGTAATCGTTGAAAAATTTGAGGAGAACAcaaaagaaaaggagaaagaaaaggaaaaagagaaggaaaaagataaggaaaaggagaaagaaaaggaaagacaAACATCTAAAGACGAAGAACCGTCAACGTCATCATCGCCAGCTCCATCATTGGTTCCACGAAGagagaagacgaagaagaaatttcctgaagcgaagaagaagaaggaagacaTAATTGACAAGAAGGAAGTGACAGTGACAGCAAAGGCACCACATTCAGGGCCAATCATACCTGACGATATTCTCATTGAAGTTGATGATCGTTTGAAAGTTTATTATCGTGGTTCTTCTGATTACGAAGCGAAAGTTCTTGAGATTAGTGCACAAGAAGGGAAACCAATTTATCGTGTTCATTACAAAGGGTGGAATGCGCGATATGACGAGTGGATTCATCGTGAAAGTATCGCAGAGAACTTGACGAAAGACGAGCCGAAAAAGCGATCGGGATCAGCAGCATCAAAGAATTCCACGCCGTCAACTGGTTCGAGTCTTACAACGCCAACAAGTAAGAATGCAAAACGAGGTCGCAATCGAGCTGACACAACAGCTTCGTCACGTTCAACAACTCCATTGTCGAATACTTCGGGAAAGGGAAAACCAACTCAGAAAAGAATTACGCGTGGTGGTGCGCCAGCAAATAAATCATCACGACGACCATCAATTAATGACGATAACTCGACAGAGTCTGATGAACCGATAAAGAAGCCAAGCAGCAATAAAGATCAAGACAAAAAAGACGACTCGAAAGTAATCGGCGGAATTCAAAAGTCAGCGTCGTcagatttgaatgaaattcgaTCGGAATTGAAGAACATTAAAGATATTAAATCAAGTGAGAAAGGAGGACAACAAGATGCTGCATCTGGTGAAATTGGATCGAAATCAGATGACGAAAAGTCAACAAAGTCTTCAATCAAGTCTGGCAAGTCGCCATTTGATGTTAAAGCAAAATTAAAGCCAACAATTCAAAGAGATTCAAGTCGTTCATCGTTTCATTCAAGTGACTCTGATTCATCACATTCAGTTCCGAGTGATGTTCCAAACAGCTCGAAAAGTGCTTACACAAGTGACAACGAATCGAATGGACCTGAGAAAGTTCCGCAAGCAACAAAAGCTGCTGATgcaaagaaatcttcatttcGCTTTGGTGAAATTGGTGAGACGAGTGATTTGAAGAACCATCCACCAGCAATTGACACTTTCTTTGATAAAGGTGACACGAAACAACAACCGAATGACGCTTCTGCGATGTTCACAAACAAAAAGCCGAACATTTTCCATGAAAAGAAACTAACACAACAACGAATTGCTAGTGAAGGTAAAGTTGGTCGTTTTGGTCAATTAGAGAAATCACTAACAAAAGATTcgccatcatcatcatcatcatcagcagctgcaaaaggaaaatcaaaagatttgAAAGCAGTTTTAGATGATCAGAAGCCAACTGAAAGTGATGTTTATGAGTTTAAAGATACGGAAGAATTTTCAGATACGAAAACGCCGCCATCATCAACGCCATCGTCAGCGAAGAAGGATCCACCAGTTGATGGTCTTACAAAGAAACAACAGTTGGCACAGCAAAAGAAACAAGCGAGATTATTACAAAAGGAAGCTCAAGAAAGTGCAATGTGTGAAGATATTGAAAGTATGATTAAAACATCGATCGTTCAGTCGAataagaaacgaaagaaatcgCCATTGAAGGAAGAGAAAGTTCAACAACCATCGTCAATGATTGTGACACGAACGCCAGGAAATGTCAATCAACAACAGTCACAACAACCTTCAGTGACATCAAGTTACGCAACTTGGACACCAGTGACAGAATTGTACGGTTCGAAAGGCGTCGTGGTTCAATCAACGACAACAAATAAAGGAATGAAACATGAATCAACATTTGATGTGTTAAGAAAATCGCCAAGTTTCAATATGCACGTCATGGATGATTTTCCAGTTGCAAAGCCGCAAGCATTTCCACCGTCATCAAGTGGCAGTCGAAGTGCtgttaaaaatctttttagtAGTCAACAAGATCTTGAACATCAACACGAATTGCTGAAGCCAATTATGGTGCCgacaaatgatgatgaaaagccTGAGCTTGAAGcatttaagaagattttagAGCCGTCGTATGATCTTCTTCCGAAAGCTgaaaaatcaacttcaattgttgataaattattaaaatcaatgaataaaaaggaagaagaatcAGCATCGATGAATCTGAACACATCAACAAACTCATCGTCATtaacaacaacatcagcaaTGACAGAAGTtgtgatgaagaaagaagaaataaaagttgatcCTTATACATTCAAAGCTAAGTCACCGCCGCTGGGAAATATTGGTGGAAAGAAGCCGCTACTTGTGTCACCAGAAATGAAAGTTGTCGATGAGAAGATCAGAGGCGGAAATGTTCAATTGCAAGGAACAATTCAAAAGCTTGAATCAGCTGTGCAAAGATCAGCAACGCCAATTCGTGGTCTTGACATATCTGCAAGTGAAAGTAACATTAAGAAGCAAGCTGATGACTCTGACACTGATTCTGATCCACGACTTGtgattgaagatgaaatgatGGCGATTGACGCAATGACTGGTGGTGAGAAGAGAAAGACTCAGATGGGAGTTTTGGAATCGATCATGATGCAAGATGACATTCATTACAAGCACTCAAGTGGAAAGGACGAAGATGGAAAGAAGTCGGAATCATCGTCGGGAGAGCAGCAAAGTGAGACGATGTCATTGCTGCTATGTGAAGAGACAATTCCAGGTTCACCAGCTCCAGTTCAAGTGAAAGACCCATTAAGTGAGATTGGAAGAAGtccatcgtcatcatcaggGGGTTTCGTTCATCCACCAACAATGCCATCACAATCATCATCGAATTATATGAAATATCCTGGCGGCATCACGACCGCTTTTCTCCATCAACAATATCAGTCATCAGCATCACATCAAACAAATCTTAAACAGATTCCAATGGACATTGACACGGATGTTGTTGGTGAGTCGGCGACTGGTGATATTTTACGTGACAAGCTGAAAGCTGATCGTGGAAGTGCAACGAGTAGTGGCAACAACACAAACAACAATTCAGACAATTCACCAAGAGATTCAAATGATGATCAATCggagaatgaaaagaatgTTAAAGCAGATGCAAGTTGTTCAAAGAAGAGAAAGCGAACGATGAAAGTTGAATGCGATATTCAACAGAAACGACGACGACCTCAACCACGGAATGTTGCAAATGTTCGTGGAAATTTGCAAGGAAATGATTCGGACAGTAATGATAATTCGGATGTCAATGCTTTCACTCCCACGCGATCTCAATCTGGTGAAATTCAAGCTGCTACTGGAACAAGTTCAGGGAAGACGCAATTTAACTTTTTGGTTGAACTTGATCCAAACCTGTCCAGTAATCAACGCATCAACATCTTAGTGAAAAAGATTCAAGAGCTCAAGAAAACTTATCTGATgattaagaatgaaatgaatgcaAAAGATCGTCGCAGGAAGAAGCTTCGTCGACGTGAGAGGGAAAATAAGCAAAAGCAAACAacgaaagttaattaa
Protein Sequence
MQGIPQKEKDDPVVLAVGTQVSAKYKGAFCEAKVRTIVKNIKVKVAYRRGGTGNVSDDDIIGEIRIGNVVEVRDLDKKETLEATITKIQDCSQYTVVFDDGDITTLRRSALCRQSGKHFNACDTLDQLPLTHPEHRGGGKRSKTQDEWSDEDEEYAIGKVICVENTDTKKKNAKESYFPALVVAPKAQETAKIHIKTEYLVRSFKDGRYYTVPKKEVTEFTNDTAQKSDITAVNAAREYLDKNVLPTHWDREVLIDSASLSEQELSDSSDDEPNEVKDRFFAQLLEFMEKRNSPLNKGPSITNRDVDLYRLYYSVEKLGGYANVTKIHNWKAIAKRLGFMPTDAIVKLVKHSYRKFLLAFEEAVSKGIEELPPRTNRDKARSSSTRSGSVASPKVPESTKASSKKSIDKPSTSSIADDSENTNESTKLTTTRKLSTASNKVKVIVEKFEENTKEKEKEKEKEKEKDKEKEKEKERQTSKDEEPSTSSSPAPSLVPRREKTKKKFPEAKKKKEDIIDKKEVTVTAKAPHSGPIIPDDILIEVDDRLKVYYRGSSDYEAKVLEISAQEGKPIYRVHYKGWNARYDEWIHRESIAENLTKDEPKKRSGSAASKNSTPSTGSSLTTPTSKNAKRGRNRADTTASSRSTTPLSNTSGKGKPTQKRITRGGAPANKSSRRPSINDDNSTESDEPIKKPSSNKDQDKKDDSKVIGGIQKSASSDLNEIRSELKNIKDIKSSEKGGQQDAASGEIGSKSDDEKSTKSSIKSGKSPFDVKAKLKPTIQRDSSRSSFHSSDSDSSHSVPSDVPNSSKSAYTSDNESNGPEKVPQATKAADAKKSSFRFGEIGETSDLKNHPPAIDTFFDKGDTKQQPNDASAMFTNKKPNIFHEKKLTQQRIASEGKVGRFGQLEKSLTKDSPSSSSSSAAAKGKSKDLKAVLDDQKPTESDVYEFKDTEEFSDTKTPPSSTPSSAKKDPPVDGLTKKQQLAQQKKQARLLQKEAQESAMCEDIESMIKTSIVQSNKKRKKSPLKEEKVQQPSSMIVTRTPGNVNQQQSQQPSVTSSYATWTPVTELYGSKGVVVQSTTTNKGMKHESTFDVLRKSPSFNMHVMDDFPVAKPQAFPPSSSGSRSAVKNLFSSQQDLEHQHELLKPIMVPTNDDEKPELEAFKKILEPSYDLLPKAEKSTSIVDKLLKSMNKKEEESASMNLNTSTNSSSLTTTSAMTEVVMKKEEIKVDPYTFKAKSPPLGNIGGKKPLLVSPEMKVVDEKIRGGNVQLQGTIQKLESAVQRSATPIRGLDISASESNIKKQADDSDTDSDPRLVIEDEMMAIDAMTGGEKRKTQMGVLESIMMQDDIHYKHSSGKDEDGKKSESSSGEQQSETMSLLLCEETIPGSPAPVQVKDPLSEIGRSPSSSSGGFVHPPTMPSQSSSNYMKYPGGITTAFLHQQYQSSASHQTNLKQIPMDIDTDVVGESATGDILRDKLKADRGSATSSGNNTNNNSDNSPRDSNDDQSENEKNVKADASCSKKRKRTMKVECDIQQKRRRPQPRNVANVRGNLQGNDSDSNDNSDVNAFTPTRSQSGEIQAATGTSSGKTQFNFLVELDPNLSSNQRINILVKKIQELKKTYLMIKNEMNAKDRRRKKLRRRERENKQKQTTKVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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