Cmar005610.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- retn
- Assembly
- GCA_900005825.1
- Location
- CVRI01000075.1:1119396-1139340[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-25 4.2e-22 78.6 0.0 2 89 208 293 207 293 0.96
Sequence Information
- Coding Sequence
- ATGGATACAAGAGATTCAGATTTAGGAGACGATTCAATGTCACACATCGATGAGCATTCTGATCGTGAAGACGATCTCCGTGATTGTGATTCAAGCGATGAAGGAGTCAATGTGAATACAAATGGAACACATGCAGCAATCGATTTTGGTAGTCGAAGTCCGAATCGAAATTCTGAGATCATGAATGATCCACAATTTCCAACGAGTCATGCTTTAGGCATGCTTAGTAATCTTTCAGCCCTTAACATGGGAGTTCAAAATCTTCAGAATTTTCAGCAACATAGCGATGttcttgagaaaattaaaatgcaagTTAGAGACATGAAAGTTGGCTTCATGAATACAGACTTCTCTGCACTTCATCCTTCTTTCACAAGCACATTACAAAATAGCTTAGGCTTCAACCCAGCACAAAACTTACAGAACACAACATCACAGAGTAATAATGACTCGTCAAATGGATTCCCCTTCACATCGTCAACACCGGCGGCGAATAAAGATGGCTCAAACTCATCAACATCAAGTGAAACATCGAATTCGTCACAGCAGAATAATGGATGGAGCTTCGAAGAACAGTTTAAACAAGTTCGACAGcTTTATGAAATCAACGACGATCCAAAGCGAAAACTCTTCCTCGACGATCTCTTTTTATTCATGCAAAAGCGAGGCACACCAATCAATCGACTTCCCATCATGGCTAAATCAGTATTAGATTTGTACGAGTTGTACAATTTGGTGATAGCTCGTGGTGGGCTTGTAGATGtgattaataagaaattatggCAAGAGATTATTAAAGGACTTCACTTACCTTCAAGTATCACAAGCGCAGCATTCACTCTAAGGACACAatacatgaaatatttgtatCCATATGAGTGCgagaagaaacatttaagCACGCCAGCTGAATTACAAGCCGCAATTGATGGCAATCGTCGTGAGGGACGTCGAACTAGTTATGGACAATTTGAGTCACAAATGCAACAACAATTGCAAATGCCTCAAATGCAACGATCACCAATTCCAAACAGTCTTCAGCAAATGTCGCCGCTTTCTTTAGTGACACATGGAAATCAGAACCCACATAGACTGATGGGTGCACCGCCTGTTGGACAGTTGCCCAGTATAGTTCCACATGACATTGAACAGCGAATGCTTGAATACATCAAACTTTTCCAAACACCTAAAGACATTAAACgCCCACAAAGTCCCGACGTCTCACGTGAGGCATTGAATGCCCTGGAAATGTCACGAATGGCACTCTGGAATATGTATCAGAATGCTAGTCCACCGAATCAACACCACAACACGACTAGTCCACCAGAAGTACAACGTGAAGCGTTGAATTTACAACGTGAATCACCATCGCCCATCCCAGCTCAATCACCGATGATTTCAATAAAACGCGAACGCGATCAACACGATGTCAACGATTATCATGTTCCACCCACAAAGAGAGGCTTTGGACGCAACAATAGCGACCTGAATCGTAAAAGTtccatcaacaacaatcatcATCACATAAGCAACAATAATACGCACGTGACACCGACGAAAATCACCAACAAAGCAATGGATCGATCGGAATCGCCGAATATTGAAAACGGTAATCACCATCGATCACCATCGGCCCATCATAAACCACAAAATGGTATGGACAATCTTGGCAGCACCATTTTGAATGGAATGCAATTCAAGATTGTCAGTAAAGATAATTCATCAACTGGTGAACCACAATTGGTTGTGAAACTCGAAGTCAATGGAATATCATTTGAAGGTGTTCTTTTCCCCAATCCCAACACATCACCATCGACATCTTTGACACCATCAACGGCATCAACTGAACCGATGGTGTCACCAAATAAGAATTCATCACCAGCAATTGGTAATGACGATCATAAAATGGCCCATCATCCAATAGTTtcatcttaa
- Protein Sequence
- MDTRDSDLGDDSMSHIDEHSDREDDLRDCDSSDEGVNVNTNGTHAAIDFGSRSPNRNSEIMNDPQFPTSHALGMLSNLSALNMGVQNLQNFQQHSDVLEKIKMQVRDMKVGFMNTDFSALHPSFTSTLQNSLGFNPAQNLQNTTSQSNNDSSNGFPFTSSTPAANKDGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKLFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPAELQAAIDGNRREGRRTSYGQFESQMQQQLQMPQMQRSPIPNSLQQMSPLSLVTHGNQNPHRLMGAPPVGQLPSIVPHDIEQRMLEYIKLFQTPKDIKRPQSPDVSREALNALEMSRMALWNMYQNASPPNQHHNTTSPPEVQREALNLQRESPSPIPAQSPMISIKRERDQHDVNDYHVPPTKRGFGRNNSDLNRKSSINNNHHHISNNNTHVTPTKITNKAMDRSESPNIENGNHHRSPSAHHKPQNGMDNLGSTILNGMQFKIVSKDNSSTGEPQLVVKLEVNGISFEGVLFPNPNTSPSTSLTPSTASTEPMVSPNKNSSPAIGNDDHKMAHHPIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352393;
- 90% Identity
- -
- 80% Identity
- -