Ccur027241.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- nfxl1
- Assembly
- GCA_905475355.1
- Location
- FR997818.1:11239585-11242053[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.014 2.6e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 18 3.1e-07 0.0056 17.7 15.9 3 19 186 202 185 202 0.95 4 18 9.7e-08 0.0018 19.3 14.8 1 19 237 255 237 255 0.93 5 18 0.88 1.6e+04 -3.0 1.6 6 10 280 284 279 284 0.89 6 18 3.4e-09 6.1e-05 23.9 9.6 1 19 290 308 290 308 0.97 7 18 3.5e-07 0.0064 17.5 18.6 3 19 345 361 344 361 0.93 8 18 2 3.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 0.002 36 5.5 23.0 1 18 395 412 395 413 0.97 10 18 3.5e-09 6.4e-05 23.9 17.1 1 19 422 440 422 440 0.99 11 18 0.0002 3.7 8.6 6.4 9 19 488 498 486 498 0.89 12 18 0.0034 62 4.7 6.7 4 12 510 518 508 518 0.90 13 18 0.34 6.3e+03 -1.7 3.6 14 18 547 551 547 552 0.87 14 18 0.22 3.9e+03 -1.0 0.1 8 12 568 572 567 573 0.82 15 18 4.6e-06 0.084 13.9 5.1 1 11 588 598 588 599 0.97 16 18 3e-05 0.54 11.3 13.5 4 18 630 645 628 646 0.85 17 18 2 3.6e+04 -6.4 3.0 9 13 652 656 652 656 0.70 18 18 1.4e-06 0.026 15.5 12.4 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCTCGCCGATACAAAGATGCGGCTGCAAAATTACAGCAGAATGTTCAAAAACATTTGAAAAATATGAAAGAACTATCGTCGTCCGAAGATGAAGAGCCCTACGAGTCCAGCGTATTGGAGGGTGTATTGCAGAGTTACTGGAGAGGTGGAGGGGACACTCACATGCTGAACAGGACCAAAAACCTTCTAGAAGAAGCTTTAAGTGGCCGTTCTATAACCTGCCTCATTTGCATCGGCTCAATCAAGCGACATGACGCTATTTGGACCTGTGACCACTGTTATTCCTACTTTCATCTCTCTTGCATACAAAAATGGTCCCATGACAGTATAAGCCTCCGTAGCATAGTCCCCGAAGGCCCTATAGCCGTTGTCAAACCCCAAAAAATCGAGTGGTGCTGTCCAAAATGCCGACATTCGTACTCAAAGGAAGAAATACCCCGTAAATATCGTTGTTTTTGCGGTAAAACTGACGATCCACCTTACCATCCTTGGTTAATACCTCATACATGTGGGGAGGTATGCGAGAAAAGGCTTTCAACTGGTGATAACTGCAAACATAAATGTTTACTACTATGCCATCCTGGTCCATGCCCCCCCTGCCCTCAGACAGTTAATGGAGTGTGTTACTGTGAGAAAGAGCGCAAGAGAGTGAGATGCAGTGCTGCCAAATGGTCATGTGGGCAGCAGTGCAAAAGAACTCTATCATGTAATACTCATAAGTGTGAAAATGAATGCCATGATGGCCCCTGTCAACCATGCAGCTACACAAGCATTCAAATGTGCCAGTGTGGCTCTGAAAAAGCTAAAAGACCATGTAATGACCCTATTTGGCAATGTCAAAAGATCTGTAACAAGAAATTCTCATGTGGCTTTCACAAATGTGACAGAGTTTGCCATTCAGGCAGTTGCGGGGCTTGTTCTAACTCAGGCATGAAGTCCTGCCCATGTGGGGCCAACCAACGTTTTGTTCAATGCCCTGACACCATGGAAACTTGCCTGGGCACATGTAATAAGCAACATGACTTCTGTGAGCATACTTGCCCTGAAAAGTGTCATAAAGGACCATGCCCCCCATGTCAGGTTTTGATAGAGAAAAAGTGCCTGTGCTCCACTCATGTTCGATCTCTGCCTTGCAGTAAAGAGTTTAAATGTGAAACCAAATGTAGAGGAACTAGACCATGTGGGAAACATGGATGTGGCAGAAAATGCTGTAATGGACATTGCCCACCCTGTGAAAAAATTTGTGATAAGCCTCTACAATGTGGTAGACATAAATGTACCAGTGTATGCCACCACGGGCCATGCTACCCATGCCCCAGGGAGTCCAAAGTGACCTGCAGGTGCAAGGAGACTTATGTAACAGTCCCCTGTGGAAGAGAAAGACACACAAAACCCCCACGATGTGCATTGCCATGCAAAATTAAATACAAATGTGGACATATTGAAGAAAATAAACACTCCTGCCATTTTGGTGATTGTCCACCTTGCAAAGCTATTTGCTTCAAAACATATCTTAAATGTGATCACAAATGCAAAGCAGTATGCCATGAAAATGTCGCTGTGGTCTTTAAGCAAGTGGAAAAACCAGCTACACCATGGGAAATACAACCTCCAAAGACTAAGATAATGACATTAGATTGCCCACCATGTGATACTCCTGTACCAGTAGTCTGCTTTGGCGAACATGAAACAGATAGTCAACCTTGCCATTCAGCTACACGCAGACCTTGTGGCAGAGAATGTGGCCGACCTCTCAACTGTGGCAATCACAAATGCTCTTTAGTCTGCCATCTATACCACCCTCATCCAGAGTATCCAAACGTACCATCCAGTTGTAGGCAATGCAATAAAGGATGTCAGGTGCCACGCCCTCAGAGATGTGCTCATAAATGTGCAATAAAAGCCTGTCACCCTGGACCGTGTCCCCCATGTGACATCCTTGAGAGACTAACTTGCCACTGCGGCTTGACTGAAGTATACTTACGTTGCCGTGAGCTAGCAACTGCTACTGAAGAAAAACTGTCATGCAAGCAACAGTGCCCGAAAAATCTAGAATGTGGTCATCGTTGTAAGAATACCTGTCACTCTGGAGCTTGTGGCAATCAAGTGTGTACTAAGAAGACTAAAATACACTGTCCATGTGGCAATCTGAAGAAAGACTCACCATGTAATGCTGTCAGGAGTGGTGATGCAAAAGTACTCTGTGACAGCACTTGTGAGGCTAAAAAGCTGGCTGCTAAGCTAGAGAGTGAGAAAGAAAAACAGAGATTGAAGGAGTTAGAAGAGGAAAAAAACCGTAGGGAGCTGGCAGAGTATGAATGGAAAATGAGTGGGAAGAAGAAGAAGTATAAAGAGAAGAAGGTTGTAGTGAATAAGGATGATAAAGGGCTGTTGAGGTACATGATACCATTAATGTCATTCCTAGTTTTAGTAGCAGCTGCTACATATTTTATAGTTTATATTTAG
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKNMKELSSSEDEEPYESSVLEGVLQSYWRGGGDTHMLNRTKNLLEEALSGRSITCLICIGSIKRHDAIWTCDHCYSYFHLSCIQKWSHDSISLRSIVPEGPIAVVKPQKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGQQCKRTLSCNTHKCENECHDGPCQPCSYTSIQMCQCGSEKAKRPCNDPIWQCQKICNKKFSCGFHKCDRVCHSGSCGACSNSGMKSCPCGANQRFVQCPDTMETCLGTCNKQHDFCEHTCPEKCHKGPCPPCQVLIEKKCLCSTHVRSLPCSKEFKCETKCRGTRPCGKHGCGRKCCNGHCPPCEKICDKPLQCGRHKCTSVCHHGPCYPCPRESKVTCRCKETYVTVPCGRERHTKPPRCALPCKIKYKCGHIEENKHSCHFGDCPPCKAICFKTYLKCDHKCKAVCHENVAVVFKQVEKPATPWEIQPPKTKIMTLDCPPCDTPVPVVCFGEHETDSQPCHSATRRPCGRECGRPLNCGNHKCSLVCHLYHPHPEYPNVPSSCRQCNKGCQVPRPQRCAHKCAIKACHPGPCPPCDILERLTCHCGLTEVYLRCRELATATEEKLSCKQQCPKNLECGHRCKNTCHSGACGNQVCTKKTKIHCPCGNLKKDSPCNAVRSGDAKVLCDSTCEAKKLAAKLESEKEKQRLKELEEEKNRRELAEYEWKMSGKKKKYKEKKVVVNKDDKGLLRYMIPLMSFLVLVAAATYFIVYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -