Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997823.1:1120692-1127517[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.016 1.7 10.2 2.6 1 23 182 204 182 204 0.96

2 11 1.3e-05 0.0013 20.0 4.8 1 23 211 233 211 233 0.99

3 11 0.0041 0.42 12.1 7.0 1 23 239 261 239 261 0.97

4 11 1e-06 0.00011 23.5 0.4 3 23 270 291 269 291 0.97

5 11 5e-06 0.0005 21.3 0.7 1 23 297 319 297 319 0.97

6 11 1.5 1.5e+02 4.1 6.1 1 23 332 354 332 354 0.95

7 11 0.005 0.51 11.9 2.1 1 23 358 380 358 380 0.96

8 11 0.00072 0.073 14.5 0.8 2 23 385 406 384 406 0.97

9 11 0.012 1.2 10.7 0.8 1 23 412 435 412 435 0.94

10 11 7.3e-06 0.00074 20.8 1.2 1 23 467 490 467 490 0.96

11 11 0.0031 0.31 12.5 0.8 2 23 496 518 495 518 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.016	1.7	10.2	2.6	1	23	182	204	182	204	0.96
2	11	1.3e-05	0.0013	20.0	4.8	1	23	211	233	211	233	0.99
3	11	0.0041	0.42	12.1	7.0	1	23	239	261	239	261	0.97
4	11	1e-06	0.00011	23.5	0.4	3	23	270	291	269	291	0.97
5	11	5e-06	0.0005	21.3	0.7	1	23	297	319	297	319	0.97
6	11	1.5	1.5e+02	4.1	6.1	1	23	332	354	332	354	0.95
7	11	0.005	0.51	11.9	2.1	1	23	358	380	358	380	0.96
8	11	0.00072	0.073	14.5	0.8	2	23	385	406	384	406	0.97
9	11	0.012	1.2	10.7	0.8	1	23	412	435	412	435	0.94
10	11	7.3e-06	0.00074	20.8	1.2	1	23	467	490	467	490	0.96
11	11	0.0031	0.31	12.5	0.8	2	23	496	518	495	518	0.96

Sequence Information

Coding Sequence: ATGGGTGATATTTGGAATTTAAGCACGTTATGTCGTTGCTGCCACGCAGATGGAAAGTTCCAGAGTCTCCGGGAAGCGATAAATAGAGTTGAAGGCTCTGAAACGTACGAAATATTGCTACGCGATGTTTTCGGAATAATTATTGACATGCCAGCTATTGAAGTCAGTTACAGTATATGCCATGATTGCATAGCAAGAGTCCGTGATGGATTTAATTTTAAAAGACAAGTCACAGCCTGTGAAGAGAAATTCCAAGTTTATTGTAAAAATGAACAATTCTTGGCAGACATTGTGAAAGTCGAGGACTCGTACAGTGACTCATGTGAGCAGTGCGAAATCGAAATTGAAGTGAACCTTACCAAAGAGGTTGGAATTAAGGATGAAGGTGCACCAAAAATTGAATGTGAGGACCAACAGGAGGTCTTCACGATTGTTCCTAAGAAAAAACAGAAAGGTAGTAAAATAATCAAAAGTACAAACGATAAGCTCCATAAAAAGTCAGCTGGCGTTATCAACCGCGCCCCAAGACACTCGCGCATGAAATACGCTTGCGAATTTTGCGCGGAAACATTCTCGGATAGGAAATCTTACTTTACTCACGTGCACAACCACGGCAAAGTTCCCTCAGACTACAAATGCCACCACTGCGACAAAAATCTTAGCAGTAAATACGCTCTCCGCGACCACATCAACTCGCACACGAATACCAAAATCTACTTCTGCCACCTTTGCAAGAACAGCTACAGACACAAGTCCACTCTGAGTCGCCACGTAAAATGGCATAATGGGGTGAAGAAGAAGAAACTGTGCGACCTGTGCGGTCGTTCCTTCAACGATAAGACCAACCTGGAGAAACACATCAACAGCGTACACTTAAAAATGCGGCCGTTCGTGTGCGATCTGTGCGGCAAGACTTACAGCGCTAAGAAGCATTTGAAGGCACACATTTTGGCGCACATGGACAAAAATCCCACCGACGTCAAGCAATATGTGTACTCCTGCAAGACTTGCGAGCAGCCGTTTCGGTGTCACAAGTCGTTTAGAGCCCATACGCTGTTACACGAGAACAAATACCTTTGTCGTCTGTGCTCCAAAGTGTGCGACGGCAAGAGCGCTTTTAAGGAGCATTGGCGCACACATCTCCCAGCCGTTTCGTGTCCGTTATGCTCAAAAACGTTTCTGACGCGTTACGCGATGAGGCGACATCTGAACTCTCATAACGGGTATAGGAAGCACGCTTGCGAGCTCTGCGACGCGAAGTGTGTTGATGTAGCTCAATTGAAGCGGCACGTCTCCAGGTGGCATGACCCGAATCGCGCAGAAAAGGTCCAGTGTGATATTTGTAAGCGTTTTGTTATGGATATTGTGAAGCATGTGGAGGGACATAGCCAGAAGAACTTCGCCTGTGAGTACTGTGGGAGATGTTACGTGGGGAAAAACGGGTTGAATCGACACATGAAGGTCACGCATTTCGGCAAGGAGGTCACTTGTGATTTGTGCAGTAAAAACTATGTGTCCACGAAAAGCCTGGTTCGGCATAAGATGAAGGTGCACAAGATTTTGAAGGTGGAGCAGGAGCACACTGAGAGAGTGGAAATGGATTAA
Protein Sequence: MGDIWNLSTLCRCCHADGKFQSLREAINRVEGSETYEILLRDVFGIIIDMPAIEVSYSICHDCIARVRDGFNFKRQVTACEEKFQVYCKNEQFLADIVKVEDSYSDSCEQCEIEIEVNLTKEVGIKDEGAPKIECEDQQEVFTIVPKKKQKGSKIIKSTNDKLHKKSAGVINRAPRHSRMKYACEFCAETFSDRKSYFTHVHNHGKVPSDYKCHHCDKNLSSKYALRDHINSHTNTKIYFCHLCKNSYRHKSTLSRHVKWHNGVKKKKLCDLCGRSFNDKTNLEKHINSVHLKMRPFVCDLCGKTYSAKKHLKAHILAHMDKNPTDVKQYVYSCKTCEQPFRCHKSFRAHTLLHENKYLCRLCSKVCDGKSAFKEHWRTHLPAVSCPLCSKTFLTRYAMRRHLNSHNGYRKHACELCDAKCVDVAQLKRHVSRWHDPNRAEKVQCDICKRFVMDIVKHVEGHSQKNFACEYCGRCYVGKNGLNRHMKVTHFGKEVTCDLCSKNYVSTKSLVRHKMKVHKILKVEQEHTERVEMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -