Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997807.1:3133271-3144409[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.11 11 7.6 0.1 1 23 90 113 90 113 0.94

2 18 0.21 22 6.8 0.1 3 23 118 138 116 138 0.96

3 18 0.02 2 10.0 0.1 2 23 142 164 141 164 0.93

4 18 0.28 29 6.4 1.3 2 23 403 425 402 425 0.94

5 18 0.031 3.1 9.4 0.1 1 20 433 452 433 454 0.94

6 18 0.22 23 6.7 0.3 2 23 464 485 463 485 0.91

7 18 0.0051 0.52 11.9 1.3 1 23 533 556 533 556 0.96

8 18 0.25 26 6.5 1.2 2 23 633 655 632 655 0.90

9 18 1.1 1.1e+02 4.5 0.3 1 23 660 683 660 683 0.87

10 18 0.0012 0.12 13.9 1.6 1 23 689 711 689 711 0.97

11 18 0.00051 0.052 15.0 3.2 1 23 718 740 718 740 0.98

12 18 9.3e-05 0.0095 17.3 2.3 1 23 745 767 745 767 0.96

13 18 0.00019 0.019 16.4 2.0 1 23 773 795 773 795 0.98

14 18 2e-06 0.0002 22.6 2.4 1 23 801 823 801 823 0.98

15 18 0.0027 0.27 12.7 4.6 2 23 830 851 830 851 0.98

16 18 0.0009 0.092 14.2 0.6 3 23 860 881 858 881 0.97

17 18 2.7e-05 0.0028 19.0 0.1 1 23 886 908 886 908 0.98

18 18 0.00046 0.047 15.1 2.6 1 23 914 937 914 937 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.11	11	7.6	0.1	1	23	90	113	90	113	0.94
2	18	0.21	22	6.8	0.1	3	23	118	138	116	138	0.96
3	18	0.02	2	10.0	0.1	2	23	142	164	141	164	0.93
4	18	0.28	29	6.4	1.3	2	23	403	425	402	425	0.94
5	18	0.031	3.1	9.4	0.1	1	20	433	452	433	454	0.94
6	18	0.22	23	6.7	0.3	2	23	464	485	463	485	0.91
7	18	0.0051	0.52	11.9	1.3	1	23	533	556	533	556	0.96
8	18	0.25	26	6.5	1.2	2	23	633	655	632	655	0.90
9	18	1.1	1.1e+02	4.5	0.3	1	23	660	683	660	683	0.87
10	18	0.0012	0.12	13.9	1.6	1	23	689	711	689	711	0.97
11	18	0.00051	0.052	15.0	3.2	1	23	718	740	718	740	0.98
12	18	9.3e-05	0.0095	17.3	2.3	1	23	745	767	745	767	0.96
13	18	0.00019	0.019	16.4	2.0	1	23	773	795	773	795	0.98
14	18	2e-06	0.0002	22.6	2.4	1	23	801	823	801	823	0.98
15	18	0.0027	0.27	12.7	4.6	2	23	830	851	830	851	0.98
16	18	0.0009	0.092	14.2	0.6	3	23	860	881	858	881	0.97
17	18	2.7e-05	0.0028	19.0	0.1	1	23	886	908	886	908	0.98
18	18	0.00046	0.047	15.1	2.6	1	23	914	937	914	937	0.98

Sequence Information

Coding Sequence: ATGTCTTCAGGCGATTCTGATGACGAACCACTCTCGGTACTAGCTGCCAATAAAAAGATAGATCCAGTAAAATACATCGATAGCACAGAAATTGAAATTGAAGTTGCAGATGTAAGGATAAAAAAGAAGAAGAAAAAGATTTATATGCCGAAACATCTGTCCGTTAGCTTAAACCTAAGGAAAGCTAACAATGGGCGTATGCCTGGAATAATTCAACGTCCAGAAGATGTTTGGTTGTACATGAAAGACCTAAATACAACTGGACCTTACAGTTGCTTACTTTGCCCAGAATGGTTCATAAACCGGTCGAAATTGATAGTTCATTATATTTTAAATCACAAGAAGGATTTTTGTGGCATTTGCAGGTATTTTGTACCAGATAGAGAAGCTTGGCTTAATCACATGAGGTTCCATGTTCCATGGCCATGCTCCCAATGCACTGAAGATTTTGAAACAGAAAAACTACTACGCATTCACCTCAGCAATGTGCATGATCTTGTACACTGCCGTCTATGCCATTTCCGAGTACCTGATGGTGAACCATACCACAATCATTTATATCAAAAGCATAATGTTACAAATTTGACCAGCAAAGATGAGGATGTTATTTGGGAATTTGAGTATGAGGGTAGTCCCAAATTCTTTTGCTTGCTTTGTTCAAAATCTAGTAATTTGACAAAGAATTTCTTCTCCCACTACATGGGATTCCATCATTTTACATTGAAATGCTTCAATAGTGTCATAAGTGGTAAAGACCCACCATTTATAGTCCAAGGTGCTGATCTCAGATCACAGTTTGTTCACAGCCAGCTTAAGGAGCATATAAGGGTTGGCTATGTGGACTTTGAGTCAAGACCTGATATAGTGTTAGCTGCAAAAGATGTTAATAATGATACCAATGAGTTGCTGCAAGCACTTGTGCCCGAAATAAAACAAGAACAACTAAGTGGCGATGAAGAGAAATGTGAAGAAGAAGAACTCAAACCTATTGATGTAAAGGAGGAATGTAAAGATGAGGATGATCATCCTCATAAAAATTATAAGGGTGATGAAGACTTTGATGTGACCTTCATGGAGCTTATTGTGTTGCAGCAATGCTACTTTGAGTATGTAAAACTGACACTAAATGATATAAATGCCAATACAGTACCACCTGTCTCAGATATACTTTATGGCAAAGCGATTGCTGAGGAAGCCACAGACATAACTTGCTCTTTGTGTAAAGTTCACTATGATACTGTTCAAGAGTTCACTAATCATATGGTTAAAATGCATTACGTGAAATATGTGCCAACCTTCTCATGTAGAGTATGTGCTACACCTTTCAATACGCAAAATGAACTAGAATCTCATGTTAGCCAAGAGCTTGGTGATTTTGAGGATCTCTGGATATGCCAGTTTTGTGATAAGGAATTTGACAATAGATTGGCAACAAGGGAACATTTGACAGAGCATTTTGATGCTCTTGATTATGATAATTGTTTTAGTCCCCATTTAGGGTTTAAGTGCCGTTATTGTTCAACATTGTTTTGGAATGAGACTGATAGAGAGAAACATCAGGTTCAAGCTCATATATCAAAACATAAAGAAGATTATTACAACTGTGAAGCATGCAATGAAATGTTTAGTGATAAGGTCTGGTTTATCCATCATTATCTAAAGAATCACGTGTGTGAAGAAACACCTCCGCAATACTTACTCAAGTGTTGCATTTGCTGCTTAGTGCTTCCGTCTGTGGAGGACATGCGGAGTCATTTCAAAAGTAAGCACCCAGAGGCAAAGAAAGTCTTCTGTTCCTTGGACACATGCAAATACAGGCCTTTGAGCCACAGAAAGTCATTTAAATTGCATGTGCGGACAATCCACAACCCGAGGACTCGCTTGGACGGAGCGGTGCAATGTTCGTTCTGTGGCCGCGAATTTAATAGTACGAGGGCGTGTAGTGCCCACATGGCACAGATGCATGGCAGTGGCAAGTTTAAGTGTAAGCTGTGCGGCGAGCAACTGCAGAGTGGAGATGAAAGGAAACTCCACTACATGATTATCCACCCAGGCCAGCATCCTTACTCCTGTTCAGTATGCGGGAAGTCCTTCCTCTACAAATCCTCCCTGTACATGCATAAGCAAGAGCACCAGCCTAAGAAGGACTTGTACCAGTGCCAGCATTGCTCCAAGGCATTCCAGAAACGGGACTCGTATCGCGAGCACCTCCTTATCCATGAGGGCCCTCGCCACGCGTGTTCCTATTGCCCGATGCGGTTCGTTCAACGCAGTAACATGTTACGTCACGAGCGGCGGCATACTGGCGAGAGACCGTACGCCTGTCTGCATTGCCCTCGCAGCTTTTCGGACAAGGGCGCTTGCAACGCGCATATCAGGACGCATTCGAAGCGGCAAGCCTACAGCTGCATGTACTGCGGGCAAACATTTGTGCAGAAATCCAAACTGACTTATCACATAAGGAAGCATACTGGTGAAAATTTGGAGAAGTGCACAGTTTGCTCGAAGTTGTTCACAAGCATGTGTTCGTTGCGAGAGCATATGAAAACTCACAACGCTCAGAAGGTGATCGTGAATTGTCCTCTTTGTGATAAAAAATACCAGGACGAGCGTTACATGCTCCGCCACCTGAGGACTTCCCACACTCGAGCTCAATTCCGGTGCCCGCTCTGCAGCAAGGCATTTACTGCGGCCGCTGATCTACGGAACCACGTGTTGACACACAGCATGTATAAGCCTTACCGCTGCAAACTGTGCACTAAGAACTACGCAGTAAAGAGGACTTTGGTAAAGCACTTACGACGACGTCACGGAGTTAAAGGGACAGATGACGCTATAAGGGAATTTTACTTAGGTCTCGAGCCACACGAGTGTGGGATCCCTCTCAGTGATGACGTCATGAGGACTATATTTGGCTCCCATAAAAGAAGGAAGCCTATCCACAATTTCGCCGGGCTCAGTACGGCGCAGAATACAACCACAGAACAAGGACAAGAAGATGAAAGGTCCGACACGGAAGACGAAAGATCGAAGGGAAGTGACAAGGATAGCGATAGTGAAGGCAATAGACCTATTAAAACTGAAAGGGATAGTGATGAAGAGCCAGATCTAGAACCTACAGATTTTGTCAGTGTGAAAATTGAGCCAATGGACGATGAGTAG
Protein Sequence: MSSGDSDDEPLSVLAANKKIDPVKYIDSTEIEIEVADVRIKKKKKKIYMPKHLSVSLNLRKANNGRMPGIIQRPEDVWLYMKDLNTTGPYSCLLCPEWFINRSKLIVHYILNHKKDFCGICRYFVPDREAWLNHMRFHVPWPCSQCTEDFETEKLLRIHLSNVHDLVHCRLCHFRVPDGEPYHNHLYQKHNVTNLTSKDEDVIWEFEYEGSPKFFCLLCSKSSNLTKNFFSHYMGFHHFTLKCFNSVISGKDPPFIVQGADLRSQFVHSQLKEHIRVGYVDFESRPDIVLAAKDVNNDTNELLQALVPEIKQEQLSGDEEKCEEEELKPIDVKEECKDEDDHPHKNYKGDEDFDVTFMELIVLQQCYFEYVKLTLNDINANTVPPVSDILYGKAIAEEATDITCSLCKVHYDTVQEFTNHMVKMHYVKYVPTFSCRVCATPFNTQNELESHVSQELGDFEDLWICQFCDKEFDNRLATREHLTEHFDALDYDNCFSPHLGFKCRYCSTLFWNETDREKHQVQAHISKHKEDYYNCEACNEMFSDKVWFIHHYLKNHVCEETPPQYLLKCCICCLVLPSVEDMRSHFKSKHPEAKKVFCSLDTCKYRPLSHRKSFKLHVRTIHNPRTRLDGAVQCSFCGREFNSTRACSAHMAQMHGSGKFKCKLCGEQLQSGDERKLHYMIIHPGQHPYSCSVCGKSFLYKSSLYMHKQEHQPKKDLYQCQHCSKAFQKRDSYREHLLIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACLHCPRSFSDKGACNAHIRTHSKRQAYSCMYCGQTFVQKSKLTYHIRKHTGENLEKCTVCSKLFTSMCSLREHMKTHNAQKVIVNCPLCDKKYQDERYMLRHLRTSHTRAQFRCPLCSKAFTAAADLRNHVLTHSMYKPYRCKLCTKNYAVKRTLVKHLRRRHGVKGTDDAIREFYLGLEPHECGIPLSDDVMRTIFGSHKRRKPIHNFAGLSTAQNTTTEQGQEDERSDTEDERSKGSDKDSDSEGNRPIKTERDSDEEPDLEPTDFVSVKIEPMDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -