Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997804.1:16201157-16210036[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6 6.1e+02 2.2 0.3 1 13 45 57 45 62 0.74

2 12 0.00024 0.024 16.1 1.8 1 23 266 288 266 288 0.99

3 12 0.0015 0.15 13.5 2.5 1 23 295 318 295 318 0.97

4 12 0.00025 0.025 16.0 4.2 1 23 349 372 349 372 0.97

5 12 0.45 46 5.7 0.6 2 23 380 402 379 402 0.87

6 12 0.012 1.2 10.7 1.6 2 21 413 432 413 437 0.92

7 12 4.4e-05 0.0045 18.4 0.1 3 23 443 463 443 463 0.99

8 12 0.0078 0.8 11.3 1.6 2 23 476 498 475 498 0.96

9 12 2e-06 0.00021 22.5 0.8 1 23 516 538 516 538 0.98

10 12 0.00087 0.089 14.3 0.0 1 23 544 566 544 566 0.96

11 12 0.0012 0.13 13.8 1.8 1 23 572 594 572 594 0.98

12 12 0.0086 0.87 11.1 8.3 1 23 600 623 600 623 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6	6.1e+02	2.2	0.3	1	13	45	57	45	62	0.74
2	12	0.00024	0.024	16.1	1.8	1	23	266	288	266	288	0.99
3	12	0.0015	0.15	13.5	2.5	1	23	295	318	295	318	0.97
4	12	0.00025	0.025	16.0	4.2	1	23	349	372	349	372	0.97
5	12	0.45	46	5.7	0.6	2	23	380	402	379	402	0.87
6	12	0.012	1.2	10.7	1.6	2	21	413	432	413	437	0.92
7	12	4.4e-05	0.0045	18.4	0.1	3	23	443	463	443	463	0.99
8	12	0.0078	0.8	11.3	1.6	2	23	476	498	475	498	0.96
9	12	2e-06	0.00021	22.5	0.8	1	23	516	538	516	538	0.98
10	12	0.00087	0.089	14.3	0.0	1	23	544	566	544	566	0.96
11	12	0.0012	0.13	13.8	1.8	1	23	572	594	572	594	0.98
12	12	0.0086	0.87	11.1	8.3	1	23	600	623	600	623	0.96

Sequence Information

Coding Sequence: ATGGAAAATATATATTGTGTAGCATGTCTGGTTACTGACGTTAATATGTACAAATTAGATAAATACTGGAAACAATATTATGATGAGATTTATTCACTTTTTGAGGGGACTTGTGATCCTACAGAAAGCCAGCATATGTGCACTGAATGCACTAAACATCTTTATAATTACATTGAATTTAAAGCCAAGTGCCTGAGGGCTCATAATGCTCTATCTGAATTTGAAATGGGTGAAAACCAGGTAACCAAGTATATTGTACAAAATGTAGATAGAAAATTAAACAATTTAGAGTCAAAATTAAAGTGTTCTATCATGTATAATCTTGATATACTAGCTCAGGAATGTATACCAAATTTAGATGACCACACTGATGTTAAAGATGTTGATGATAAAATTAAAACAGAAACGGTAGAAGTAAAAGTTGAAAATGACATAGTGTTTGAGAGAGCAATAGAGAATTTACTAAATGGAAACAACAAGGATGATTCGAACAATGATGTTGAATTTGATGAATACAGTAGTTCCTCTGATGAAGTATTATCTACTATAGCCACTAAAACTAAACATAAACGTAAAATTGAATCACATTCGAAGACAAAAAGATGTAAGAAGTCAAAATTAGAAATTCCTGACCATGAACAAGTTAGTGCCAAAGGAAATGCAAGCAGGAAAAAGAAAAACTGTTTGGACTTTGAATTCTTTGAACATTGTATAACGATAACAAATCTGTCGCCAGAGGATGCCAGAAGTGAAATGCTACTACGGAAAGAGACAAATAGTTATAAATCTTTAGAATACAAATGTGATATGTGTTTTAAGGGATTTGAATTGAAAACTGCGTTCAATAAACACATGGAGAGACATAGTATTGCAGCTGGAGAGTATGTATGTGAATTTTGTAAACTCCGGTTCCCAGCAAAGAAGCAGTTACGAAAACATTTGCTAGTTTGCCACGAGAGGAAGTTCAGTTGTATTTTGTGCCCATACGTTTGCTATGGCGCGAACCAAGCGAAATATCACGTCAATCATCACAAAGGAAAGAAATATGCGTGTGAATTTTGTGGAGAAATGTTCAATAAGAAACATACAATGATGAAGCACAGACGGACGAAGCATTTGGACTTTGCGGACGAGTGTGTGTGTGAGTTTTGTGGGAATGTGTTCGTGTCGCCTGTGGGGATATCTTTGCACAAGAAGTTTTCGCATCGACAGGAAAAGAACAGCAAAGACGGCCCAGAGTGTACGGTCTGTGGAGTACACTTTTGTTCTGAGGACGCGTGGAAACGGCACTTGGTCACTTCTTCGAAGCACAAAGTCAGCAACGGTTGTAAGAAGTGCGGCGCGACGTTTGGTACCCCGGACGAGTTGCGTGCGCACGCGCAGACTCACGAGCGCAGGCGCACCGAGGGCGTTAAACTACCCGTCACTTGTGCTATTTGCAACAAGCAGTATCACAAGTTACGCGAGTACAAGTCACACATGATAACGGAACATCCACAGTCGGAGGAGGCTAAGAGGTTGCTCGAAGTCGATCAGATACGACCGTTTGTGTGCGAAGTGTGCGGAAAGGCTTTTAAGAGTCCGTTCTACCTGACGTACCACAATCGCACGCACACGGGCGAGCGCCCGTACGCGTGCGGGGCGTGCGGCAAGGCCTTCCGCATGCCAGGCCAACTGGCCGTGCACTCCAATATACACACCAAGCAGCGGGCATACAAGTGCCAGCTCTGCACCAGCGTGTTCGCGCACCGGAGCGTCCTTGATAAGCATATGAAGGCTCATCTCGGTATCAGACCTCACAAATGTACGTCATGCGACAAAGCGTTTATGCACCAGTGCGAACTCAAACAGCATCTCAAGTACACACACGAGAAAGTGCCATGGCCTAAACGACAGAGGAAAAACAAAAAGCTAAACTCCGAGTGA
Protein Sequence: MENIYCVACLVTDVNMYKLDKYWKQYYDEIYSLFEGTCDPTESQHMCTECTKHLYNYIEFKAKCLRAHNALSEFEMGENQVTKYIVQNVDRKLNNLESKLKCSIMYNLDILAQECIPNLDDHTDVKDVDDKIKTETVEVKVENDIVFERAIENLLNGNNKDDSNNDVEFDEYSSSSDEVLSTIATKTKHKRKIESHSKTKRCKKSKLEIPDHEQVSAKGNASRKKKNCLDFEFFEHCITITNLSPEDARSEMLLRKETNSYKSLEYKCDMCFKGFELKTAFNKHMERHSIAAGEYVCEFCKLRFPAKKQLRKHLLVCHERKFSCILCPYVCYGANQAKYHVNHHKGKKYACEFCGEMFNKKHTMMKHRRTKHLDFADECVCEFCGNVFVSPVGISLHKKFSHRQEKNSKDGPECTVCGVHFCSEDAWKRHLVTSSKHKVSNGCKKCGATFGTPDELRAHAQTHERRRTEGVKLPVTCAICNKQYHKLREYKSHMITEHPQSEEAKRLLEVDQIRPFVCEVCGKAFKSPFYLTYHNRTHTGERPYACGACGKAFRMPGQLAVHSNIHTKQRAYKCQLCTSVFAHRSVLDKHMKAHLGIRPHKCTSCDKAFMHQCELKQHLKYTHEKVPWPKRQRKNKKLNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -