Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997814.1:12460442-12471550[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.4 41 5.9 1.2 2 23 68 89 67 89 0.96

2 11 0.0092 0.93 11.0 1.2 2 23 96 118 95 118 0.95

3 11 1.9 1.9e+02 3.8 0.2 2 23 126 148 125 148 0.88

4 11 0.00062 0.063 14.7 1.3 2 23 155 176 154 176 0.94

5 11 3.8e-07 3.8e-05 24.8 1.6 1 23 182 204 182 204 0.96

6 11 0.00058 0.059 14.8 0.6 1 20 210 229 210 231 0.93

7 11 5.5e-05 0.0056 18.0 2.6 1 23 553 575 553 575 0.98

8 11 3.2e-05 0.0033 18.8 4.0 1 23 582 605 582 605 0.97

9 11 0.063 6.4 8.4 0.2 1 23 613 636 613 636 0.94

10 11 0.00011 0.011 17.1 2.3 1 23 642 666 642 666 0.97

11 11 3.8e-06 0.00039 21.7 1.5 1 22 672 693 672 693 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.4	41	5.9	1.2	2	23	68	89	67	89	0.96
2	11	0.0092	0.93	11.0	1.2	2	23	96	118	95	118	0.95
3	11	1.9	1.9e+02	3.8	0.2	2	23	126	148	125	148	0.88
4	11	0.00062	0.063	14.7	1.3	2	23	155	176	154	176	0.94
5	11	3.8e-07	3.8e-05	24.8	1.6	1	23	182	204	182	204	0.96
6	11	0.00058	0.059	14.8	0.6	1	20	210	229	210	231	0.93
7	11	5.5e-05	0.0056	18.0	2.6	1	23	553	575	553	575	0.98
8	11	3.2e-05	0.0033	18.8	4.0	1	23	582	605	582	605	0.97
9	11	0.063	6.4	8.4	0.2	1	23	613	636	613	636	0.94
10	11	0.00011	0.011	17.1	2.3	1	23	642	666	642	666	0.97
11	11	3.8e-06	0.00039	21.7	1.5	1	22	672	693	672	693	0.97

Sequence Information

Coding Sequence: ATGGATTCATCAATACCGTTTTACTGTCTGCCATATGTATTCGTGTATTCAGAAACATCTGATCAAGACGGCGTTATAGACAAAAATCGAGATGGGTACGATGTATTGCACTCAGCGTTGCCGTCTGACGATGTTCTGGCCCAATTCTTGGATGGAGACGAGCCTTTGGAGGAGCCTGATTTGAATGGGCCGACAGTCTTGCATTGTGAAATATGCCAGGACAAATTTGACAACGCTAAAAAGTATTATGGTCATTTACGAGTTCACTCCAAGGACAAGTTGTGGAAGTGTGACCAATGTCCCGACCAGAAGTTCTCAACTAAACAGCAGCTCATGAAACATAGTTTAACCCACAAGCCATTACAACATGTATGGAAGTGTCTACAGTGTTCAATATCCTTTGAAGCTCTGTGGCGGTTGCAGCAGCACTTGTTTGCTAAACATTTGAAGTGCAGACCATTAAAATGTGACCAATGTGAAAAAGCCTTTTACAAAATGTCAGATCTGAAGAAGCATAAAGATTTGCATTCTGACATAAGGAGGCACGCCTGTCCCCAATGCGAGATGGCGTTCAAAGACAAGTCTAACCTGAAGCGGCATATGCTGCGGCACAACAACGAGAGGCCCTTTTCATGCCCCTGGTGTGGTAATAAGTTTAAACAGTCTGCATCGATGAAGAGGCACAGTCAGAAGTGTGTCCTGAACAAGGGAAAGGAAGCGTCAGACAATAGCAGCAGTAGCGGGGTTCGAGTCCCAGACCCGGCTCCCGAGACACGTGGGGTTGTCGTCGATGTCACTGTGAACAGGGAACCTTCAAATCCTCCACCAGTTCCTGAAGAAGATAAAACAAACTTAGCTACCACAGAAGCTAATAGAATAGTTGAAAATATTGTAGACGATATTCTATCAGCTGAAGATGACTATTTAACGATGCCACAAAACAACGAAATTTTAAACACGTACAACCAAGACATTGACCAAACCCCTGAGAATTCACTCCAAATAGATCTCCTCAAAGAAATGAATCAACTGCACATACTGGATGGAGAGCTTTTCTACGATTTTGACTTGGACACGACTCAACCAAACCAAATTTTCAATAATAATGACATAGACAGAAACGAGGTGTTATTCGATTTCAACGATACTAACAAAAGTTTAGACCAGGACCTGATGAACGTTTTTTACGACAAGCAAATTACAGAGGAACTACTAAATACTGAAGTTCTAACGGAGAAAAATGAAGATCTTAACAAACATGTGGCAGTGAATGAATGCGCGACTATTTTCGAGAGTGACGTTGATCTAGAAGCTAGTACCAATTTGGCGGCCAATTTAAATCAGTTGATTGGCGAGAATAGCGTTCAGTATATTTCTACAGAAGAAGATGATATGTTTATAATTAGTTTGAAGAGTGAAATTGATGCTGAGCAGTTGACAGATATGCTTAATATAGTAACGAATGACAGAAGAGAAGATTCTAAGGCAGAAGATAACGTGGCAGAAGATAATGTGGCAGAATTGGATAATGATGATTCAGAGAATAATGCTGATCCTATAGTTCTGAAGATTCAGGAGCCTAAGTTAGATGTGACTGATCAAACTAGTGATAAGGAAAATAAGAAGGTGAAGAGTAAAGTTAAGAAGTGCGTGCTGTTTATGTGCCGCACTTGTAAAAAAGTGTTCAACAAGAGGGATAATTATAAATCACACATTGCGACGCACGAGCCATCGCTCCGTTCCCACAAGTGCTCAGTCTGCAGCGAGCGCTTCAGTTACCGCTCGACGCTCAACAAGCACTACCGCAGCGCACACTCACCGCTCGTCCTCCCGTCTCACGCTTGCCAGACCTGCGGGAACACGTACCGAGCAGCTTGGATGCTGCGCGTGCACGTGGAGCGCGACCACGAGGGACGCGCACCGCACAAGTGCTCCGTCGCCGGATGCAGCAAGACCTTCTACAAGAAGTCCGACCTGGTCGAGCACCAACGATATCACAGCGGGGAGCGGCCATTTTCTTGTGATATTTGTAAGAGATCTTTCCCGCGAATGTCGCATCTAAGGAGGCATGTCAGAACAGTTGATTGCACTAAACAGATAGCGGTGCCGTCATACAGCAGCCGTAATCTATCTGTGAATGACGTCAATATACGACCGCTATATGACTGCATTGCTGTCCTAGGAAACCGAAGCGTTATACGTTCACGCGACCATCGGACACCGACAAGACAGCCGTCATGCAAATGGTGGCACCGCTTATTGAGGTTACGGTGTCAGTTACCGGGCCATTTCGTCTACATAGACAACGTTCTAGCGACGTTCACCGTTATATTACGGCCTTTCATGGAAACCAAAGCTTTACACCCGCTACTCCGCCAATCACCGCCAAGGAGACCCAAAAACAATATTATGGCTTAA
Protein Sequence: MDSSIPFYCLPYVFVYSETSDQDGVIDKNRDGYDVLHSALPSDDVLAQFLDGDEPLEEPDLNGPTVLHCEICQDKFDNAKKYYGHLRVHSKDKLWKCDQCPDQKFSTKQQLMKHSLTHKPLQHVWKCLQCSISFEALWRLQQHLFAKHLKCRPLKCDQCEKAFYKMSDLKKHKDLHSDIRRHACPQCEMAFKDKSNLKRHMLRHNNERPFSCPWCGNKFKQSASMKRHSQKCVLNKGKEASDNSSSSGVRVPDPAPETRGVVVDVTVNREPSNPPPVPEEDKTNLATTEANRIVENIVDDILSAEDDYLTMPQNNEILNTYNQDIDQTPENSLQIDLLKEMNQLHILDGELFYDFDLDTTQPNQIFNNNDIDRNEVLFDFNDTNKSLDQDLMNVFYDKQITEELLNTEVLTEKNEDLNKHVAVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEEDDMFIISLKSEIDAEQLTDMLNIVTNDRREDSKAEDNVAEDNVAELDNDDSENNADPIVLKIQEPKLDVTDQTSDKENKKVKSKVKKCVLFMCRTCKKVFNKRDNYKSHIATHEPSLRSHKCSVCSERFSYRSTLNKHYRSAHSPLVLPSHACQTCGNTYRAAWMLRVHVERDHEGRAPHKCSVAGCSKTFYKKSDLVEHQRYHSGERPFSCDICKRSFPRMSHLRRHVRTVDCTKQIAVPSYSSRNLSVNDVNIRPLYDCIAVLGNRSVIRSRDHRTPTRQPSCKWWHRLLRLRCQLPGHFVYIDNVLATFTVILRPFMETKALHPLLRQSPPRRPKNNIMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -