Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997809.1:14369028-14382568[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00063 0.064 14.7 0.1 1 23 395 417 395 417 0.97

2 11 0.0012 0.12 13.9 0.7 2 23 425 447 425 447 0.97

3 11 0.0053 0.54 11.8 2.3 1 23 451 473 451 473 0.97

4 11 0.16 16 7.1 2.2 1 23 478 501 478 501 0.97

5 11 0.0009 0.091 14.2 0.1 1 23 505 528 505 528 0.93

6 11 0.0046 0.47 12.0 0.1 1 22 541 562 541 566 0.93

7 11 0.0006 0.061 14.8 1.0 1 23 582 605 582 605 0.94

8 11 0.00012 0.012 17.0 0.3 3 23 657 677 655 677 0.96

9 11 0.0036 0.37 12.3 1.6 2 23 683 704 682 704 0.97

10 11 5.4e-06 0.00055 21.2 0.8 1 23 710 732 710 732 0.98

11 11 3.1e-06 0.00031 22.0 1.1 1 23 738 761 738 761 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00063	0.064	14.7	0.1	1	23	395	417	395	417	0.97
2	11	0.0012	0.12	13.9	0.7	2	23	425	447	425	447	0.97
3	11	0.0053	0.54	11.8	2.3	1	23	451	473	451	473	0.97
4	11	0.16	16	7.1	2.2	1	23	478	501	478	501	0.97
5	11	0.0009	0.091	14.2	0.1	1	23	505	528	505	528	0.93
6	11	0.0046	0.47	12.0	0.1	1	22	541	562	541	566	0.93
7	11	0.0006	0.061	14.8	1.0	1	23	582	605	582	605	0.94
8	11	0.00012	0.012	17.0	0.3	3	23	657	677	655	677	0.96
9	11	0.0036	0.37	12.3	1.6	2	23	683	704	682	704	0.97
10	11	5.4e-06	0.00055	21.2	0.8	1	23	710	732	710	732	0.98
11	11	3.1e-06	0.00031	22.0	1.1	1	23	738	761	738	761	0.98

Sequence Information

Coding Sequence: ATGTATTTATTTCCTTCACATCAAGAGTTGAAAACTAAATGGCTAAGAGCCATTGGCCGCCCCCGTTGGGACCCGCCAAGTCACGCTCGCATTTGTAGTGCACATTTCCAATTGGATAACTTTTCATGTCATGATGGTTACCGAGTGAGACTTAAGACTGATGCAGTCCCTACCAAAACTTTACCGCCAAATGCAAATTTTGATGCATCAAGTGTGGAAACATGTAGAATATGTTTAGCCACAGACATCAAAATATACAACATTGAAACAAGTCAGCTAAGCTGTTACCTTGACTCCTTTAGTGGCCTTGCTGACCATCCAACAATAGAAGGCCTACCAAAATTCGTGTGCTATTTATGTGTGGCAGTCATCATCAAATGCCATAGACTATTTGAAAAGAGTTTGGTTTCACAGACGGTGTTAATGGATATTTTTGCACAGAATGGTCAAATCAACAAGAAACTAATTGAAGAATATGACAATTGTAAATTAAAAATCAGTCCGTTTGTTGTTTGCACTATGTCCAACGAGATCCAATCAGATGATAGTCAGACATCTGTTACGAATAGTAAAACATCACTTGGACTTAAGGATGATAAAGAAATCATACTAATTGACAAAGACACTAAAGGGAATTTCTTAATATATCAGCTGGATGAGCCAAATCAATTTGTGAATAAATATATTGGTAATAATAAAGTTGAAAAGGGTATATCCATAAAATCTGAAGATAGTACAAAAAATGCTGATATTATATCGGATAGTGAAGGAGACATTCGAGAAACGGATCCTGAACAAGATAATGCGCCTAGTAGTCCATTGCAAGCAGGTGGTGGGAATCGTGGAGTGGATGTGTACCCAAGTTCAGAAGATGATAGTTTAATAGTAGTAGAAGATGATAATTTTGAAGATGAGAATATTGAAATATCTTCCATTAAAAGTAATAAATTAGATAGTGACAATGAAAATAAAGTTGAACAGATATTCATAAAAAATGAAGGTCCGGAAAGTGAAAATTATTCTACCGAAATACCCAAACGCCAAGTAATTAAAAAGAGAAGGGAAAAAACAGATGAAAACGAAATGCAAAAATATTTTGATATTGTAAAATTATCGGTACCTGAACAAATAGAGGAATGGAGAACGGCGATGTCGCGTCGTAGTTTCAAAAGCGGTTCCGGGCATGAATGCGAGATCTGCGGCAAGATAATTCCCCAGGCGAAGCTTTTGAGTGTTCATATGTATAGCCACAACCCAAGGCGGGGCAAGGCTCAATGTCCGGTGTGCAAAGTTCGCTTTAAGAACGAGAAGTTGGTAAAATCTCACATAAACCGTGACCATAGCAGGAAGTTTTATTGTAAAGTGTGTTCCAAAATGTTCTACCAAATGCGCCTAGCGAAAAGGCATCAACTACTTCACGCCGGCCACAAGTACCGATGTACTCTGTGCCCGTTTGCCAGTTTGCACACGTCGGCCCTATGCGCGCATATGCTGACCCAGCATAGGCAACCGCACGCTTGCGGAGCGTGCGGACGGGCTTTCGTCAACGAGAGTGGCCTGGCACGCCATCGGTCCGTGGCCCATCCGAACATTCAGGAGGAAAAGGGTAACAAGAAATCTTACCGCTGTAAAATATGCGGTATCGATTTTGCTTCGGAAGGCGCGAGACGGGTGCATATCCTCACGTCCAGCCAACACTGCATAAATGATGCCAGTGAATCGCCTTCGGAGGCAAACGCAGCATTCAATTGTATGCAATGTGGTGAAACATTTCCGTCGCTCTATAAGCTCAAATCGCATAAAAAAGAGGAGCATCCAATACCCCTACGTAGGGCAAAACAAAGTGCGTGTTCGATACAGTGCCAGTTCTGCGAGGAAACGCTGAACAGTCGGAAGCAACATTGGCACCATATACTCAGAAATCATCCTCGCCAGACGAAAAATTACCAAGCCATCATCACGGTGATATGTGATATTTGCGGTAAAGGATTTCAGAATTCGACGAAGCTCCAGATACACAAACTGCGGCACAGCAGCCCGAAGGTCCGTTGCCCCCACTGCCCCAGGCTGTTCTACGACCAACACGGGCTGTCATTGCATGCCACCACTCACTCGACGCTGCGTCCCTATGTTTGTGGCACGTGCGGACAGACGTTCAAACTCAAATCGAACTTCACAAGACACGCTAATGTCCATTCAGATGAAGCTCGATACTCGTGCCCAATGTGTGAGAAGAAATTCAAATATTCGACAAGCCTAAACCTCCACGTGCGGACTGTGCATAACAAGGAGCCATATCCGTCTCGAAAGCCAAGGAATAGACGTGCCAAAGAAGATGATGATAATGATGTGTAA
Protein Sequence: MYLFPSHQELKTKWLRAIGRPRWDPPSHARICSAHFQLDNFSCHDGYRVRLKTDAVPTKTLPPNANFDASSVETCRICLATDIKIYNIETSQLSCYLDSFSGLADHPTIEGLPKFVCYLCVAVIIKCHRLFEKSLVSQTVLMDIFAQNGQINKKLIEEYDNCKLKISPFVVCTMSNEIQSDDSQTSVTNSKTSLGLKDDKEIILIDKDTKGNFLIYQLDEPNQFVNKYIGNNKVEKGISIKSEDSTKNADIISDSEGDIRETDPEQDNAPSSPLQAGGGNRGVDVYPSSEDDSLIVVEDDNFEDENIEISSIKSNKLDSDNENKVEQIFIKNEGPESENYSTEIPKRQVIKKRREKTDENEMQKYFDIVKLSVPEQIEEWRTAMSRRSFKSGSGHECEICGKIIPQAKLLSVHMYSHNPRRGKAQCPVCKVRFKNEKLVKSHINRDHSRKFYCKVCSKMFYQMRLAKRHQLLHAGHKYRCTLCPFASLHTSALCAHMLTQHRQPHACGACGRAFVNESGLARHRSVAHPNIQEEKGNKKSYRCKICGIDFASEGARRVHILTSSQHCINDASESPSEANAAFNCMQCGETFPSLYKLKSHKKEEHPIPLRRAKQSACSIQCQFCEETLNSRKQHWHHILRNHPRQTKNYQAIITVICDICGKGFQNSTKLQIHKLRHSSPKVRCPHCPRLFYDQHGLSLHATTHSTLRPYVCGTCGQTFKLKSNFTRHANVHSDEARYSCPMCEKKFKYSTSLNLHVRTVHNKEPYPSRKPRNRRAKEDDDNDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00345903;
90% Identity: iTF_00345903;
80% Identity: iTF_00345903;