Basic Information

Insect: Clostera curtula
Gene Symbol: -
Assembly: GCA_905475355.1
Location: FR997799.1:10294926-10302786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-06 0.00023 22.4 1.1 1 23 462 484 462 484 0.99

2 8 5.9e-07 6e-05 24.2 1.5 1 23 490 512 490 512 0.98

3 8 8.8e-06 0.00089 20.5 0.5 2 23 521 542 521 542 0.98

4 8 7.9e-06 0.0008 20.7 0.8 1 23 548 570 548 570 0.99

5 8 9.1e-08 9.2e-06 26.8 2.1 1 23 576 598 576 598 0.98

6 8 5.4e-07 5.5e-05 24.3 1.3 1 23 604 626 604 626 0.97

7 8 9.1e-05 0.0093 17.4 7.3 1 23 632 654 632 654 0.97

8 8 1.1e-05 0.0011 20.3 0.7 1 22 660 681 660 681 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-06	0.00023	22.4	1.1	1	23	462	484	462	484	0.99
2	8	5.9e-07	6e-05	24.2	1.5	1	23	490	512	490	512	0.98
3	8	8.8e-06	0.00089	20.5	0.5	2	23	521	542	521	542	0.98
4	8	7.9e-06	0.0008	20.7	0.8	1	23	548	570	548	570	0.99
5	8	9.1e-08	9.2e-06	26.8	2.1	1	23	576	598	576	598	0.98
6	8	5.4e-07	5.5e-05	24.3	1.3	1	23	604	626	604	626	0.97
7	8	9.1e-05	0.0093	17.4	7.3	1	23	632	654	632	654	0.97
8	8	1.1e-05	0.0011	20.3	0.7	1	22	660	681	660	681	0.96

Sequence Information

Coding Sequence: ATGTGTGAATGGCTGTCGCACAGCGATTGGTGCGATGTACGGCTGGTGTGTGGTGGTCGTACGTTCAACGCCCATCGCGCTGTTTTAGCCAGTGTGAGCAGATTTCTTAGGCAAATACTACTTTCGTGCCCTGCAAATGAAACGCCGACATTTATCGTCTTGCCCGACTTCGACCTGGATGCCATGTCGTCTGTTCTATACTACATTTACAATGGCGAAGTTGTAGTACAGAATGATAAGTTAGATACGTTCTTAGATATAATTAAAACTATGCAAATTTTCATCGACTGCCGATACTTGCCTAATGAGAGTGACAAAGTAGATTTTGATTACTTGGAATACAAAACAAGTTTAGATAAAGTAAACATATTTAAATTAGGACATCTAGATTATGAAGATCAACCATACGTCAATATAAAAAAGGGTAAAGCGGACAATCTACAACATTCACTAAGTCAGACGGATTATAGCGATAGGACAGTACGCCGACAGAATTTGAGTGAAGAGCGCCAGACTGCTTTAAGCAATCTGAAATCACCTTTTTTGGACCGACAAAGGAACTCTTTTCTACGTGATTTATTTATCGAGACATATCCTCGAAACGGTAATGTTAACGGTCTAGCGGCAGGCGTGCTAGCAATATCAAATGAATGCTATCGAGCCCCCGCATCTGCGCTCTTGACGAATGCAAATGTTAAACATCTCGGCGCCGACGACTCGCTCTCGAAACCGTATAAAAAAACTGTTGAACACATCAAACATTCGCCTTCCGTATTTCACCCTCATAAACCAAGATGCCCTGACGATCAACCAGATAACGAAGAACTAAACCGACTTCACGATCCTGCCCAAAATATTTGTTCTATGAACTTTGGAAGTAATAACAAGCATGATAATAATGAAGTTAATTTGAGATCTGCAAATGTATGGCTGGATCATGACACATTGCAAACTGACTCATTATGCCGTTTGAGATTACAAGAGCAGATATTAACAAGGTTTTACGTTCCATCTTTAGATATTAACGTTAGTCCACCAATGTTGGAGGCTATGAAGTCACTGCAAAATGTTAGGAGTCCTTGTCTAGGTACAACTAACGAGCGTAGTAATGAAAAGCAGAAACTTGAGACAGTAACCAAAGGTACTATACTTAATCAAGTTATGCGAAGTCCATGGTGCCCTCGAATCCCAATCAACTATAAACCATTCCGAAGAAAAGATGATGCAATAAAAAGTCCTCCAATAAATCGACATGAAAACTCCGTTAATAATCATAACGATAGTAATAATAATGTATCGGATATTGTAAAAGAGAAAATTTCAACAACCAAGGAAGAAGCAACAATAGCGATGGTTTTACCTGTTATTAACAGACAAGAAGATTTTAAATGCACAGTTTGTAAACAGGTATTTACAAACGACGATACTCTGTCAGCTCATATGAGGCGACATACATCTAATGCTCGGTATACCTGTGGTGAATGTGGAAAGACTTTCTCTCAACTACGCAACTTCAAGTACCATATGTCAATACACAGGGGAACTAGGGAGTTCGCGGCGACTTGCTCCGTATGCGGAAAGTACTTCAATGACAGAGGCTACCTTAGCAGTCATATGAAGATCCATAGGAATCGTAAGGAATATAAATGTAGTCAATGTCCGAAGTCGTTCAATCAACGCGTTGCATACAACATGCACGTCCGAATCCACACAGGAGTAAAACCACACGTGTGCGAAGAGTGTGGTAAGGCGTTTTCCCGTAAGATGCTTTTGAAGCAGCATCAGCGCACTCATTCCGGGGAGAGGCCCTACGCTTGCCCTCATTGTGACAAGCGCTTTGCTGATAGATCCAACATGACGCTGCACCTCAGACTGCATACTGGCGTTAAACCGTTTTCGTGTACGCTGTGCCCGAAGTCGTTCACCAAAAAGCATCATTTGAAGTCGCATCTCAACTTCCACACCGGCTCAAAACCTTACTCCTGTCCTAGGTGCAACCTTGCTTTCACTCAATCTTCTAACATGAGGACTCATATGAAGAAATGCAACGCATCTGAGCCGCTGAGCGAGTGTTCACAGAATAAATGA
Protein Sequence: MCEWLSHSDWCDVRLVCGGRTFNAHRAVLASVSRFLRQILLSCPANETPTFIVLPDFDLDAMSSVLYYIYNGEVVVQNDKLDTFLDIIKTMQIFIDCRYLPNESDKVDFDYLEYKTSLDKVNIFKLGHLDYEDQPYVNIKKGKADNLQHSLSQTDYSDRTVRRQNLSEERQTALSNLKSPFLDRQRNSFLRDLFIETYPRNGNVNGLAAGVLAISNECYRAPASALLTNANVKHLGADDSLSKPYKKTVEHIKHSPSVFHPHKPRCPDDQPDNEELNRLHDPAQNICSMNFGSNNKHDNNEVNLRSANVWLDHDTLQTDSLCRLRLQEQILTRFYVPSLDINVSPPMLEAMKSLQNVRSPCLGTTNERSNEKQKLETVTKGTILNQVMRSPWCPRIPINYKPFRRKDDAIKSPPINRHENSVNNHNDSNNNVSDIVKEKISTTKEEATIAMVLPVINRQEDFKCTVCKQVFTNDDTLSAHMRRHTSNARYTCGECGKTFSQLRNFKYHMSIHRGTREFAATCSVCGKYFNDRGYLSSHMKIHRNRKEYKCSQCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKRFADRSNMTLHLRLHTGVKPFSCTLCPKSFTKKHHLKSHLNFHTGSKPYSCPRCNLAFTQSSNMRTHMKKCNASEPLSECSQNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00345977;
90% Identity: iTF_00345977;
80% Identity: iTF_00345977;