Ccur032413.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- -
- Assembly
- GCA_905475355.1
- Location
- FR997798.1:3115877-3124715[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 5.1e-06 0.00051 21.3 0.8 1 23 202 224 202 224 0.99 2 31 0.0011 0.12 13.9 0.5 2 20 257 275 256 277 0.92 3 31 8.8e-05 0.009 17.4 1.7 2 23 306 328 305 328 0.96 4 31 0.042 4.3 9.0 0.2 2 21 346 365 345 366 0.92 5 31 0.072 7.4 8.2 1.5 1 23 376 398 376 398 0.99 6 31 0.019 1.9 10.0 0.1 1 23 416 438 416 438 0.94 7 31 0.00072 0.073 14.5 0.5 2 20 491 509 490 511 0.93 8 31 0.0099 1 10.9 6.2 2 23 554 576 554 577 0.96 9 31 0.0006 0.061 14.8 0.7 1 23 626 649 626 649 0.97 10 31 0.0042 0.43 12.1 0.2 1 23 703 725 703 725 0.97 11 31 0.055 5.6 8.6 5.3 1 23 736 758 736 758 0.96 12 31 0.075 7.6 8.2 0.9 2 23 770 791 769 791 0.96 13 31 0.0031 0.31 12.5 1.4 1 23 801 823 801 823 0.98 14 31 0.0012 0.12 13.9 2.2 1 23 847 869 847 869 0.96 15 31 9.2e-05 0.0093 17.3 3.0 1 23 880 902 880 902 0.98 16 31 0.0001 0.01 17.2 0.2 1 23 910 932 910 932 0.98 17 31 0.00059 0.06 14.8 0.1 2 23 952 974 951 974 0.97 18 31 0.0071 0.72 11.4 0.7 1 23 992 1014 992 1014 0.98 19 31 1.7 1.7e+02 3.9 3.6 2 23 1022 1045 1021 1045 0.93 20 31 0.12 13 7.5 0.5 2 23 1056 1078 1055 1078 0.94 21 31 0.0068 0.69 11.5 0.2 2 23 1101 1122 1100 1122 0.94 22 31 1.5 1.5e+02 4.1 3.1 2 23 1165 1187 1164 1187 0.95 23 31 0.004 0.41 12.2 0.4 2 23 1203 1224 1202 1224 0.95 24 31 0.058 5.9 8.5 4.7 3 23 1232 1252 1230 1252 0.96 25 31 0.015 1.5 10.4 0.8 2 23 1263 1285 1262 1285 0.95 26 31 0.3 31 6.3 2.2 2 23 1302 1320 1302 1320 0.90 27 31 0.31 32 6.2 2.2 2 21 1324 1343 1323 1344 0.93 28 31 0.84 85 4.9 1.4 2 23 1392 1413 1391 1413 0.92 29 31 0.016 1.6 10.3 0.9 2 23 1424 1446 1423 1446 0.96 30 31 3 3.1e+02 3.1 0.8 2 23 1462 1480 1462 1480 0.78 31 31 0.32 33 6.2 1.7 2 20 1484 1502 1483 1504 0.93
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGCTGTGCCTCAAGCTCGGCGATTTCTTCTCAATTTTCACAGTGGACAATGCCCTACAACTTGCAGAAATGGCGATGGAGTGCACCCGGGTGAAAATATACGAAGGAGATGGGTTGCCTGACAAAGTCTGCTCAGAATGTGTGCAAAAGCTCAGTAGTGCATATATATTCAAACAGCAGTGTGAGAGGGCCGATCAAGAGTTGAGGCGAAATTATGTACCACCACCAGGATTTAGTATCAGCCCACCGCCACCCAACCGGCAAAGCAGCGATTCCGCCTTCTCGAATAACACCGACACCTCTAACGCGACCAAAGCCAATTCTTTCGACAACAAAACCACACCAGTTAGTAGGAACCGAAAGCGTAGCGTGGAGAGTGACAACGCTTCACTCGGTAGTCATTCGAATGAATACAGAACCACTAGTACAAAGCGCGTCGAAGAACTTCGGAAGTCCCAGAAAAGACCGCGTCTCCACAATCACTCGGACAATAACTCGCAGCTAGATTCCGATTTTGAGTGCAACACTAACTCGTATACAGCTGAGACGGACTCCGATGAGCCGCTGTCCAGGAGTATCTACAAATGCAAGCTGTGTCCAAAGAGTTACCAGTCTTCGAAGAGCCTCGCTATACACATGAGGGTACATTCAAACTCCAAGAAAGAAAGCCTCGGACAGAATGCGGTCGTCAATATTCCGAGCAATGAAAACACCAACGATGCCAACGACGTGGAGAACAAATTGAGTTGTGGCAAATGTGGGAAGACTTTCAAACTGTCTATCATGTTGAAACGCCACCATGAGGTATGCTCGAAGTCGCCTCCGTCTCCGGCTAAGAAGGAGCTTGTCGTGTCCTTGGAACCTATAGATGGTATAAGGGACAGAAGAATCGAGTGTGAAATATGCACCTCCCGGTTCAAAACTATGGATAACTTGGAGAAGCACATGCGAGTCTGCCACGCAGCTGCGCTTTACAAGCAAAATCAAGACCCTAGTCGCAAGGCTTCAGTACCGTGTTTATATTGCCATAAATCCTTCGACGATTACTATCCTTACACCGATCATTTAAATGCGTGTCCGAAAACCGATAGTTCAAAGCCGTTTCAATGCACTCTGTGCCAGTTTGTGGCGGCCAAAAAAGCCTACTTCTTCCTGCACTTAAGGAAGCACTTTGAGACTCGTCTTTTAGGCCAGAAGATGGGAGAAACGACTGCTAACGTGTTTGAATGTCGCGTTTGCAGTAAAAAGTTGCCGTCTCAAGATTTACTGATATCTCATTTGGGGGAACACGTCTCTGGCATTGAAGATGATGGGGGTGGGGGCATCGAGGATGGTGGCGGTTTTGACGATGGCGGAGTGGATTATGATGATAGAGCCAGCACATTCGAAGATTCTGCCTCAATTCAATCAGTGCCAAGTAGCTCCAAAACACCAGCTAAAACCGTAAAATGCGAAAAATGCGACAAGGAGTTCAAATACAAAAAAGCCTTAGAGACGCACGAATTGAAGTGTCAGGGCGAGAGACTGAGCCTAATTAAGTCGGAGCCAGTGGACAAAACTCCAACGACCAGCGCGTTGGAGATACCAGAGACCCATTTAGAGTCGGAATCTAGTCAAGAAGAGGGCGACGACAACACTTGTGATATTTGCGAAAAGCAATTTTCGTATAAGCGATTGCTCCTACACCACAAGAAAACTAAACACCACATGAGCTCGGGGCACAAGCGCGCTAAAATATTTTTGAAAGACTGCAACGTTCGGTGTCTGATATGCGACGTGGAAATGAAGGTCAGCGCCATAAACGAGCACAACCAAAAGCATATATCGGTGAATATAAAGCCACGGAACTTGTACACTTGCGTAGACTGTGGTGACAAGTTCAAGAGCTGCAGTGCTCTCGCCAACCACATTAAGCTGATCCACCGATTGAAACAGCCGAAGGTGGACACCAATGTGAACCCGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACTGGGTCCAGAGTCACGACGACTTTGGGGAGGTTTCCGCCAATACGGAGAGCAAGCCGCACGTGAACCTTAGCGGCTTCACATGCCCGATATGCAGCAAAAAGATGCCCACGCTGATCTCGCTAAAGAGGCACGTGAACTGGCACTCGAATGTAGGGAACACGTTGGAGAAGAAGTACGAATGTATCGTGTGTAAAGAGGCATTCCGCTTCCAGTGCCACTACAAGCTGCACATGCGCAGCCACTACAACGACCCCAACCTGGACCCGAAGCACCTGATCTGCCCCGTGTGCAACCGCCGCAGCAAGCACCTGCGCGCCGCGCAGATGCACATGAACTACCACAAGCAGACGCGCTTCCAGGCCAAGGACTACCAGTGCTCCATCTGCGAGCGGGTGTTCCAGCACCGCAAGGTGTACCTGTCGCACATGGCCATCCACTACAAGCGCGGCGACGGGCACCACAACACCGTGGTGGGCAACGCGGCCTCGTCCGGCGACCCCGCCGCCTTCGCCTGCCAGCAGTGCGGCAAGGTGTGCGACACCGAGAACTCGCTCAAGCACCACCTCATCTGGCACAAGTCCAAGGGCTTCCTGTACGGCGCGCGCCACGAGTGCACGCTGTGTGACCTCAAGTTCACCAACAAGAAGACCCTCGAGCTGCACCTGCGCTCGCACTTCGAGGACGACGACGGGCCCTACAAGTGCGCCGTGTGCGGCAAGGGCTACACGGACGAGGGCTACTACCAGCGGCACGTGAAGGGCCACAACTTCGACCACCAGTCGCACAAGGCGCGCATCGAGCGGCTGCGCAAGGGCAAGGTGAAGTGCCCCATCTGCGGCAAGTACTACGCCGACCTGGTGAAGCTGATCGGGCACCTGCGACGCACGCACCCCGAGAGCAAGATGGTGAAGCCCGACCCCGACGCGCCCGCGCCGCGCGTGTTCCCGTGCACGTTGTGCGCCAAGGTGTTCTACGACGAGCGCCGCTTCCGCGCGCACCAGGAGCGCCACCTGCGGAAGCCCGGCATCGTGCGCTGCAAGTTCCGCCGCTGCGGCAAGAAGTTCATCTCGCTCAAGAACCACCGGCTGCACCTCAAGGCGCACTTCAACCGCAAGTTCTTCGACGACCCGCTGCCGTGCCCGCAGTGCGACGACAAGTTCACCAAGGGCTACGACCTGCACTACCACCTGCGGGACGTGCATCGCGTCACCGAGACGTGGATCGCCGCGGCCTCCGAGGCCTCCCTGGACGGGCCGCTGCAGGAGCTGCAGTGCTCCGTGTGCTTCAAGGTGCTGGCCAGCAAGGGCAACTACGAGCGGCACGTGGACTACCACAACTCGCTGCGCTGCGGCTACTGCTTCGAGTACTTCACGGCCGTCCGCTTCCTGGAGGGCCACCTGGCCTTCGGCTGCGAGAAGAAGAAGCTCGTGGGCGACACCGAGGTGTTCCCCAAGCGGGTCAAGTGCGAGATCTGCTACAAGGCCTTCCACGTGCAGGTCAAGCTCGACTGCCACCTGCGGACGCAGCACGGGATCACCGTCAACAGGGAGGCCTCGGCGGGCTCGTCGGAGATCGTGTGCGATTACTGCTTCAGGGTGTTCGAGAACGAGTACTCGCTGTCCACTCACAAAATCTACCACCGAACGGTCGGTTACTTCGGCTGCCTGTATTGCAACAAGAAATTCAACACCTTGACCGGCTACAGGAAGCACAAGAATCATCATTACGCGCAGCTGAACGTCGAGAACCCGACGAAGTGCGAGCACTGCGACGAGACGTTTGTCGCTTTCCGAGAAATGATTTATCACATGAGGGATGTGCACGGGGACGACAAGGACTGGCTCGTGTTGCCCAAGGAGTCGATCGAGGAGAAATGCCCCATCTGCAACAAAATCTTCTTCAACCTGCACAGGCACTTGGCCTATCACGAGGAAACCAGGTGCAAGAAGTGCAACGAGTACTTCTACTCTAGGGCGGACTTCGACAATCATTTGTGTGAGATCGAGAGCGATGATGAAACCGAATTGCTTCCCAGCGGCGAGATCATCCAATACGAGGAATGCAAATTCTGCTTCAAGCAAATCACCAAGAAGAACTCCAAGAAGAAACACGACCTCATTCACAGGGGATCCGGCGCCATATCGTGCCGCTTCTGTAAACTCAAGTTTAAAACCATTGACGCTTTCAACATTCACTCGTTCTCGCACCGAAGTAGAAAGTACAACAAGAAGCCTATAAAGTGCAGACAGTGCAACGAGAGGTTCGTTAAGTATGGGCCGTTCATGAAACATATGAAGCAAGCACACAAGTCGGCCAAGAAGGTTCACTATAGGGCCGTGGTTATGGCGGAACGGTGCGTGGTCTGCGGAGAGAACTTCCCGAACCTTCACAACCATTACCGAGCCCATCTCATGAACCAATGCCAACAATGCCGCAAGTACTTCACCTCGGCAAAGCTATTCGCGAGCCACGCATGTGATAAGGAAGACGTGGACCCGTCTAAAGTGTTCACTTGCGATGAAGACTTAAATCATTTGATCAGAACATATGTTCCCAAGGATGAGAAGGACGATGAAAAGTTCTACGGGTACACTGATGATGAGGACGAAATGGATTTGCAGCCGGAACCTGAAGTTCAACAGCCACAAATTATCCCTGACGAAGACAGTCAGGAGGAGAAGCCAGACACTGTCATGTCGTTCCTACATTCTCCCATTATATCTGATGTGCTCTCACTGTACCAGAAAGAAGATACTAAGACTGTGGATGAAGTCGTTGATCTGGCCGATGACGATGATGACGTAGATGCTGGTGAAACACTATCTGTTATAGTGGTAATCGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFFSIFTVDNALQLAEMAMECTRVKIYEGDGLPDKVCSECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNNTDTSNATKANSFDNKTTPVSRNRKRSVESDNASLGSHSNEYRTTSTKRVEELRKSQKRPRLHNHSDNNSQLDSDFECNTNSYTAETDSDEPLSRSIYKCKLCPKSYQSSKSLAIHMRVHSNSKKESLGQNAVVNIPSNENTNDANDVENKLSCGKCGKTFKLSIMLKRHHEVCSKSPPSPAKKELVVSLEPIDGIRDRRIECEICTSRFKTMDNLEKHMRVCHAAALYKQNQDPSRKASVPCLYCHKSFDDYYPYTDHLNACPKTDSSKPFQCTLCQFVAAKKAYFFLHLRKHFETRLLGQKMGETTANVFECRVCSKKLPSQDLLISHLGEHVSGIEDDGGGGIEDGGGFDDGGVDYDDRASTFEDSASIQSVPSSSKTPAKTVKCEKCDKEFKYKKALETHELKCQGERLSLIKSEPVDKTPTTSALEIPETHLESESSQEEGDDNTCDICEKQFSYKRLLLHHKKTKHHMSSGHKRAKIFLKDCNVRCLICDVEMKVSAINEHNQKHISVNIKPRNLYTCVDCGDKFKSCSALANHIKLIHRLKQPKVDTNVNPADFCEVVVTKAEPLDWVQSHDDFGEVSANTESKPHVNLSGFTCPICSKKMPTLISLKRHVNWHSNVGNTLEKKYECIVCKEAFRFQCHYKLHMRSHYNDPNLDPKHLICPVCNRRSKHLRAAQMHMNYHKQTRFQAKDYQCSICERVFQHRKVYLSHMAIHYKRGDGHHNTVVGNAASSGDPAAFACQQCGKVCDTENSLKHHLIWHKSKGFLYGARHECTLCDLKFTNKKTLELHLRSHFEDDDGPYKCAVCGKGYTDEGYYQRHVKGHNFDHQSHKARIERLRKGKVKCPICGKYYADLVKLIGHLRRTHPESKMVKPDPDAPAPRVFPCTLCAKVFYDERRFRAHQERHLRKPGIVRCKFRRCGKKFISLKNHRLHLKAHFNRKFFDDPLPCPQCDDKFTKGYDLHYHLRDVHRVTETWIAAASEASLDGPLQELQCSVCFKVLASKGNYERHVDYHNSLRCGYCFEYFTAVRFLEGHLAFGCEKKKLVGDTEVFPKRVKCEICYKAFHVQVKLDCHLRTQHGITVNREASAGSSEIVCDYCFRVFENEYSLSTHKIYHRTVGYFGCLYCNKKFNTLTGYRKHKNHHYAQLNVENPTKCEHCDETFVAFREMIYHMRDVHGDDKDWLVLPKESIEEKCPICNKIFFNLHRHLAYHEETRCKKCNEYFYSRADFDNHLCEIESDDETELLPSGEIIQYEECKFCFKQITKKNSKKKHDLIHRGSGAISCRFCKLKFKTIDAFNIHSFSHRSRKYNKKPIKCRQCNERFVKYGPFMKHMKQAHKSAKKVHYRAVVMAERCVVCGENFPNLHNHYRAHLMNQCQQCRKYFTSAKLFASHACDKEDVDPSKVFTCDEDLNHLIRTYVPKDEKDDEKFYGYTDDEDEMDLQPEPEVQQPQIIPDEDSQEEKPDTVMSFLHSPIISDVLSLYQKEDTKTVDEVVDLADDDDDVDAGETLSVIVVIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -