Basic Information

Insect: Clostera curtula
Gene Symbol: ZIPIC
Assembly: GCA_905475355.1
Location: FR997804.1:16219386-16223378[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.3e-05 0.0013 20.0 5.4 1 23 222 244 222 244 0.96

2 12 7e-05 0.0071 17.7 2.0 1 23 250 273 250 273 0.97

3 12 0.0012 0.12 13.8 7.4 1 23 279 301 279 301 0.98

4 12 1.8e-06 0.00018 22.7 1.2 1 23 306 328 306 328 0.98

5 12 2.4e-05 0.0024 19.2 2.3 1 23 333 356 333 356 0.97

6 12 0.00077 0.078 14.4 6.7 1 23 362 384 362 384 0.98

7 12 4.7e-05 0.0048 18.3 0.4 1 23 390 412 390 412 0.98

8 12 3.1e-06 0.00032 22.0 1.4 1 23 418 440 418 440 0.98

9 12 1.9e-07 2e-05 25.8 2.5 1 23 446 468 446 468 0.99

10 12 5e-06 0.00051 21.3 0.1 1 23 474 496 474 496 0.99

11 12 0.0014 0.14 13.7 3.3 1 23 502 524 502 524 0.93

12 12 7.2e-06 0.00073 20.8 5.1 1 23 530 553 530 553 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.3e-05	0.0013	20.0	5.4	1	23	222	244	222	244	0.96
2	12	7e-05	0.0071	17.7	2.0	1	23	250	273	250	273	0.97
3	12	0.0012	0.12	13.8	7.4	1	23	279	301	279	301	0.98
4	12	1.8e-06	0.00018	22.7	1.2	1	23	306	328	306	328	0.98
5	12	2.4e-05	0.0024	19.2	2.3	1	23	333	356	333	356	0.97
6	12	0.00077	0.078	14.4	6.7	1	23	362	384	362	384	0.98
7	12	4.7e-05	0.0048	18.3	0.4	1	23	390	412	390	412	0.98
8	12	3.1e-06	0.00032	22.0	1.4	1	23	418	440	418	440	0.98
9	12	1.9e-07	2e-05	25.8	2.5	1	23	446	468	446	468	0.99
10	12	5e-06	0.00051	21.3	0.1	1	23	474	496	474	496	0.99
11	12	0.0014	0.14	13.7	3.3	1	23	502	524	502	524	0.93
12	12	7.2e-06	0.00073	20.8	5.1	1	23	530	553	530	553	0.98

Sequence Information

Coding Sequence: ATGGAAAAGTTAGCTTTATGCCGTATTTGTTTAAGTGTAAATGTGGATAGTAGGAATATTATTAACCATGAGCTCCAAGAAATATATCAAAAATTAACCTGCCTGGCCTTTAAAACTGAAGACCGGAGGCCACTCCTTGTGTGTTACATTTGCATATCACTGCTGAGGAAGGCACTAGCTCTTAAATTAGACAGTCTAGCAGCTGAGCATCTGTTTTCACAGATATTAGACGGGGAGGACCAGATTGTGAATTTACCTGTGAACGCTTGTTTTGCAAAATCACATTGCATGACATCAGTGTCTCTACAACCAATCAGTATAAATACAGCATATGAAGAAGTTATTAGTCAGGTAGCAGGCAGTGATACTTTTAAAATAAAACGCGAAGTTATTGATGAGAATGATCCTTTATCAGAATGTGAAGACAATGGTGATTTCTTAGCCCCAATAGACCTGAAGAGTTTGAAGGAAAATGTAAAAGAAGAATCAGGATTAAACAAACATAAAGATTTATCACATACAAAAAAATTGGTAGAGAATGATGTTATTGCGTCATTTATCGAGAGAAGATCCGATCCGACAAAATTAGATCCTATTCATAACGAACCCTATACCAATACTTGTCAAGAACGTGGCGATTTAGAGTCTTACAATAGTAAAGAATGTAAATGTCACTTGTGTCCTAAGTCCTTCAGGTTCCTTAGTGCCCTAAAAAGACATATTTTAAGGCATACTGGCGAAAAACCGTTCAAATGCCCTAGATGCGATAGAAAATTTGCGGAAAATAGCAATATGTTAAAACATTTCCGAAACCAACATCCCGAGGCTACCGCGTTTACGTGTCATAAGTGCCATAACAAATTTGATAATAAGGCAAGTCTTAAACAGCATTTTCGAATACACATTAATGAGGCATACACATGCGATATATGCCAAAAAGGCTTTAAAAGGAAATGGGAATTGAAAGAACATTTGTTCACACATGGCAAAAAACCGTACATGTGTGACGTCTGCCAGAAGTGTTATAAAAACCGTAACTTTTTAGAAACTCATATACGTATAGCGCATACGGAAGAAAAACGACATAAGTGCGACAAATGTAATTTGGCGTTCAAACAGTATCATCAGTTGAAAGTGCACAGATACACACACACTGGTAAAAAGCCTTTTATATGCGACATGTGTGAAAAAGATTTCGCATACAAGACGGTTTTAATCAATCATATGAAAACGCATACTGGGGAGAAACCATTCAAATGTGACCAGTGTTGGAAGGCCTTTAGACAACTCTCACAGCTGATGACACATTTTCGCATACACTCTGGTGAGAGACCATTCAAATGCAAAACTTGTACGAAATCTTTTATACAACAGACTGATCTGACGAAACATATCCGTATCCACACTGGGGAAAGACCATATAAATGTGATGTGTGTGGCAGGGCGTTCGCCCAAAGCTACCCTTGGGTAGTCCATATGCGATCGCACACTGGCGAAAAACCGTATCCTTGTAACTTTTGCCAAAAACGTTTCAGCAGCCATGGTCGTTTAAAAAAACATAATGTGGTCCACACTGGGGAGAAACCTTATAGCTGTCATATATGCGAGAGAGAGTTTTGTGCAAAGTCCACTCTAAGACGACATATGCGCAGAATCCATGATACCGAGGTGAAGCAATATGGACCTAAGAATGTACCTACAGTAAATAGTCATGACTAG
Protein Sequence: MEKLALCRICLSVNVDSRNIINHELQEIYQKLTCLAFKTEDRRPLLVCYICISLLRKALALKLDSLAAEHLFSQILDGEDQIVNLPVNACFAKSHCMTSVSLQPISINTAYEEVISQVAGSDTFKIKREVIDENDPLSECEDNGDFLAPIDLKSLKENVKEESGLNKHKDLSHTKKLVENDVIASFIERRSDPTKLDPIHNEPYTNTCQERGDLESYNSKECKCHLCPKSFRFLSALKRHILRHTGEKPFKCPRCDRKFAENSNMLKHFRNQHPEATAFTCHKCHNKFDNKASLKQHFRIHINEAYTCDICQKGFKRKWELKEHLFTHGKKPYMCDVCQKCYKNRNFLETHIRIAHTEEKRHKCDKCNLAFKQYHQLKVHRYTHTGKKPFICDMCEKDFAYKTVLINHMKTHTGEKPFKCDQCWKAFRQLSQLMTHFRIHSGERPFKCKTCTKSFIQQTDLTKHIRIHTGERPYKCDVCGRAFAQSYPWVVHMRSHTGEKPYPCNFCQKRFSSHGRLKKHNVVHTGEKPYSCHICEREFCAKSTLRRHMRRIHDTEVKQYGPKNVPTVNSHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -